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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
INETADDIVYRLTVIIDDRYESLKNLITLRADRLEMIINDNVSTILAS

The query sequence (length=48) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6crd:B 438 47 0.9792 0.1073 1.0000 1.16e-25 1a14:N, 2b8h:D, 2b8h:A, 2b8h:B, 2b8h:C, 1bji:A, 2c4a:A, 2c4l:A, 6crd:E, 6crd:D, 6crd:G, 6crd:H, 6crd:C, 6crd:F, 6crd:A, 6d3b:A, 4dgr:A, 1f8b:A, 1f8c:A, 1f8d:A, 1f8e:A, 6hcx:A, 6heb:A, 6hfc:A, 6hg0:A, 1iny:A, 5jr5:D, 5jr5:B, 5jyy:A, 5l14:A, 5l15:A, 5l17:A, 5l18:A, 1l7f:A, 1l7g:A, 1l7h:A, 6lxj:B, 6lxj:C, 6lxj:D, 6lxj:A, 6mcx:A, 1mwe:A, 4mwj:A, 4mwl:A, 4mwq:A, 4mwr:A, 4mwu:A, 4mwv:A, 4mww:A, 4mwx:A, 4mwy:A, 4mx0:A, 1nca:N, 1ncb:N, 1ncc:N, 1ncd:N, 1nma:N, 1nmb:N, 1nmc:N, 1nmc:A, 1nna:A, 1nnb:A, 1nnc:A, 3nn9:A, 4nn9:A, 5nn9:A, 6nn9:A, 7nn9:A, 6pzd:A, 6pze:A, 6pzf:B, 6pzf:A, 6pzw:D, 6pzw:C, 6pzw:B, 6pzw:A, 6pzy:B, 6pzy:E, 6pzy:F, 6pzy:A, 6q1z:A, 6q1z:B, 2qwa:A, 2qwb:A, 2qwc:A, 2qwd:A, 2qwe:A, 2qwf:A, 2qwg:A, 2qwh:A, 2qwi:A, 2qwj:A, 2qwk:A, 7r6h:C, 7r6h:D, 6u02:J, 6u02:A, 6u02:B, 6u02:E, 5vh0:A, 5vh0:B, 5vh0:C, 5vh0:D, 3w09:A, 5w26:A, 5w2u:A, 5w2w:A, 5w2y:A, 4weg:A, 1xoe:A, 1xog:A, 1ybk:C
2 8hn8:R 276 22 0.1875 0.0326 0.4091 2.8 8hoc:R, 8jxt:R, 8jxv:R, 8jxw:R, 8jxx:R, 7yfc:R, 7yfd:R
3 2hq9:B 138 21 0.1875 0.0652 0.4286 2.8 2hq9:A
4 5fgl:B 206 22 0.2292 0.0534 0.5000 7.6 5fgl:A, 5fgl:C, 5fgl:D, 5fgl:E, 5fgl:F
5 2dqn:A 485 15 0.1875 0.0186 0.6000 9.6 2f2a:A
6 4tlg:A 396 21 0.2292 0.0278 0.5238 10.0 4tlg:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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