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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
ILKPGEKLPQDKLEELKKINDAVKKTKNFSKYLIDLRKLFQIDEVQVTSESKLFLAGFLEGEASLNISTKKLATSKFGLV
VDPEFNVTRHVNGVKVLYLALEVFKTGRIRHKSGSNATLVLTIDNRQSLEEKVIPFYEQYVVAFSSPEKVKRVANFKALL
ELFNNDAHQDLEQLVNKILPIWDQMRKQQGQSNEGFPNLEAAQDFAR

The query sequence (length=207) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2ex5:A 207 207 1.0000 1.0000 1.0000 2.28e-151 2ex5:B
2 4lq0:A 298 142 0.1932 0.1342 0.2817 1.20e-10
3 4lq0:A 298 132 0.1836 0.1275 0.2879 9.52e-06
4 4lox:A 300 143 0.1787 0.1233 0.2587 1.76e-06 5e5o:A, 5e5s:A, 5e63:A, 5e67:A, 4z1z:A, 4z1z:B, 4z20:A, 4z20:D
5 4lox:A 300 127 0.1739 0.1200 0.2835 3.39e-05 5e5o:A, 5e5s:A, 5e63:A, 5e67:A, 4z1z:A, 4z1z:B, 4z20:A, 4z20:D
6 6bci:A 292 122 0.1449 0.1027 0.2459 3.18e-05 6bce:A, 6bcf:D, 6bcf:A, 6bcf:G, 6bcf:J, 6bcg:D, 6bcg:A, 6bcg:G, 6bcg:J, 6bch:A, 6bch:D, 6bch:H, 6bch:L, 6bcn:A, 6bcn:C, 6bcn:G, 6bcn:J, 6bct:A, 3r7p:A
7 6bci:A 292 162 0.1981 0.1404 0.2531 5.9 6bce:A, 6bcf:D, 6bcf:A, 6bcf:G, 6bcf:J, 6bcg:D, 6bcg:A, 6bcg:G, 6bcg:J, 6bch:A, 6bch:D, 6bch:H, 6bch:L, 6bcn:A, 6bcn:C, 6bcn:G, 6bcn:J, 6bct:A, 3r7p:A
8 3e54:A 159 87 0.1401 0.1824 0.3333 2.32e-04 3e54:B
9 6uw0:B 295 90 0.1111 0.0780 0.2556 0.001 6uw0:A, 6uwk:A
10 4yit:D 277 134 0.1643 0.1227 0.2537 0.002 4yit:A
11 4efj:B 291 89 0.0966 0.0687 0.2247 0.002 4efj:A, 4z1x:B, 4z1x:A
12 6bd0:A 300 87 0.1014 0.0700 0.2414 0.014 6bda:A, 6bdb:A, 3qqy:A, 6uvw:A, 6uvw:D, 6uwg:A, 6uwh:A, 6uwj:A
13 4yhx:A 294 87 0.1111 0.0782 0.2644 0.015
14 5t2o:A 293 87 0.1063 0.0751 0.2529 0.024
15 5esp:A 292 141 0.1498 0.1062 0.2199 0.061 5esp:B
16 5esp:A 292 56 0.0725 0.0514 0.2679 6.3 5esp:B
17 5t2h:A 296 88 0.1063 0.0743 0.2500 0.061
18 5thg:A 294 87 0.1014 0.0714 0.2414 0.11 5thg:D
19 4yis:A 295 151 0.1884 0.1322 0.2583 0.23 4yis:B
20 3eh8:A 254 88 0.0918 0.0748 0.2159 0.31 3eh8:D, 3eh8:G, 1p8k:Z, 2qoj:Z
21 4c5o:D 333 65 0.0870 0.0541 0.2769 1.1 4a9w:A, 4a9w:B, 4c5o:A, 4c5o:B, 4c5o:C, 4c5o:E, 4c5o:F, 4c5o:G, 4c5o:H
22 8auv:f 141 34 0.0628 0.0922 0.3824 1.1 8b2l:f1, 7qiy:H, 7qiz:RA
23 1qz7:A 524 76 0.0918 0.0363 0.2500 2.1 7afw:A, 7ar4:AAA, 4djs:A, 8ei9:A, 8eia:A, 8eib:A, 8eic:A, 2gl7:A, 2gl7:D, 1i7w:A, 1i7w:C, 1jpp:A, 1jpp:B, 1jpw:A, 1jpw:B, 1jpw:C, 3ouw:A, 8ru3:A, 8ru4:A, 8ru4:B, 3sl9:A, 3sl9:E, 3sl9:B, 3sl9:G, 1t08:A, 7uwi:A, 7uwo:A, 8y0p:A, 8y0p:B, 8z10:A
24 7wua:A 603 37 0.0725 0.0249 0.4054 5.3 7wua:B, 7wua:C, 7wua:D
25 1ons:A 278 24 0.0531 0.0396 0.4583 5.5
26 6ip5:2x 146 34 0.0531 0.0753 0.3235 6.0 7a01:B3, 7a09:g, 5a2q:Q, 5aj0:BQ, 9bdl:AS16, 9bdn:AS16, 9bdp:AS16, 8bhf:R3, 9bkd:Y, 9bln:Y, 8btk:Ap, 7cpu:SQ, 7cpv:SQ, 4d5l:Q, 4d61:Q, 6d90:RR, 6d9j:RR, 9f1b:Ap, 9f1c:Ap, 9f1d:Ap, 6fec:H, 5flx:Q, 6g18:Q, 6g4s:Q, 6g4w:Q, 6g51:Q, 6g53:Q, 6g5h:Q, 6g5i:Q, 8g5y:SQ, 8g5z:SQ, 8g60:SQ, 8g61:SQ, 8g6j:SQ, 8glp:SQ, 6gz3:BQ, 6gz4:BQ, 6gz5:BQ, 6hcf:R1, 6hcj:R2, 6hcm:R1, 6hcq:R2, 8ifd:2x, 8ife:2x, 6ip6:2x, 6ip8:2x, 3j7p:SQ, 3j7r:SQ, 3jag:QQ, 3jah:QQ, 3jai:QQ, 3jaj:SQ, 3jan:SQ, 8jdj:AC, 8jdk:AC, 8jdl:AC, 8jdm:AC, 7jqb:R, 7jqc:R, 5k0y:H, 8k2c:SQ, 7k5i:Q, 4kzx:Q, 4kzy:Q, 4kzz:Q, 5lks:SQ, 7ls1:y2, 7ls2:y2, 5lzs:QQ, 5lzt:QQ, 5lzu:QQ, 5lzv:QQ, 5lzw:QQ, 5lzx:QQ, 5lzy:QQ, 5lzz:QQ, 7mdz:QQ, 7mq8:LC, 7mq9:LC, 7mqa:LC, 6mtb:QQ, 6mtc:QQ, 6mtd:QQ, 6mte:QQ, 7nwg:R2, 7nwh:QQ, 7nwi:QQ, 7o7y:Ap, 7o7z:Ap, 7o80:Ap, 7o81:Ap, 5oa3:Q, 6ole:SQ, 6olf:SQ, 6olg:BQ, 6oli:SQ, 6olz:BQ, 6om0:SQ, 6om7:SQ, 7oya:Q2, 7oyb:Q2, 7oyc:Q2, 7oyd:QQ, 8oz0:g, 8p03:S, 8p09:S, 8p2k:Ap, 6p4g:R, 6p4h:R, 6p5i:R, 6p5j:R, 6p5k:R, 6p5n:R, 8pj1:Y, 8pj2:Y, 8pj3:Y, 8pj4:Y, 8pj5:Y, 8pj6:Y, 8ppk:Q, 8ppl:AQ, 8q7z:Ap, 8q87:Ap, 7qgg:SQ, 8qoi:SQ, 7qp6:Y, 7qp7:Y, 7qvp:SQ, 7qvp:RQ, 6qzp:SQ, 7r4x:Q, 6r5q:UU, 6r6g:UU, 6r6p:UU, 6r7q:UU, 8scb:QQ, 6sgc:R1, 7syg:R, 7syh:R, 7syi:R, 7syj:R, 7syk:R, 7syl:R, 7sym:R, 7syn:R, 7syo:R, 7syp:R, 7syq:R, 7syr:R, 7sys:R, 7syt:R, 7syu:R, 7syv:R, 7syw:R, 7syx:R, 5t2c:Ay, 8t4s:Q, 7toq:AS16, 7tor:AS16, 7tql:R, 7ucj:QQ, 7uck:QQ, 4ug0:SQ, 4ujc:CQ, 4ujd:CQ, 4uje:BQ, 4v5z:Ai, 4v6x:AQ, 5vyc:Q1, 5vyc:Q2, 5vyc:Q3, 5vyc:Q4, 5vyc:Q5, 5vyc:Q6, 6w2s:R, 6w2t:R, 7wtt:Q, 7wtu:Q, 7wtv:Q, 7wtw:Q, 7wtx:Q, 7wtz:Q, 7wu0:Q, 6xa1:SQ, 7xnx:SQ, 7xny:SQ, 8xsx:SQ, 8xsy:SQ, 8xsz:SQ, 8xxl:SQ, 8xxm:SQ, 8xxn:SQ, 6y0g:SQ, 8y0w:SQ, 8y0x:SQ, 6y2l:SQ, 6y57:SQ, 6yal:S, 6yam:S, 6yan:S, 6ybs:Y, 8yoo:SQ, 8yop:SQ, 6z6l:SQ, 6z6m:SQ, 6z6n:SQ, 7zjw:Sb, 7zjx:Sb, 6zlw:R, 6zm7:SQ, 6zme:SQ, 6zmi:SQ, 6zmo:SQ, 6zmt:R, 6zmw:Y, 6zn5:R, 6zoj:Q, 6zol:Q, 6zon:g, 6zp4:g, 6zuo:Q, 6zv6:Q, 6zvh:Q, 6zvj:g, 6zvk:B3, 6zxd:Q, 6zxe:Q, 6zxf:Q, 6zxg:Q, 6zxh:Q
27 5k16:B 328 35 0.0773 0.0488 0.4571 7.0 5cvm:A, 5k16:A, 5k1c:A, 5l8h:A, 5l8w:A
28 7xnt:C 320 61 0.0773 0.0500 0.2623 7.5
29 3mxa:A 301 70 0.1014 0.0698 0.3000 8.2 4aab:A, 4aab:B, 4aad:A, 4aad:B, 4aae:A, 4aae:B, 4aaf:A, 4aaf:B, 4aag:A, 4aag:B, 4aqu:A, 4aqu:B, 4aqx:A, 4aqx:B, 1bp7:A, 1bp7:B, 1bp7:C, 1bp7:D, 6fb0:A, 6fb0:B, 6fb1:A, 6fb1:B, 6fb2:A, 6fb2:B, 6fb5:A, 6fb5:B, 6fb6:A, 6fb6:B, 6fb7:A, 6fb7:B, 6fb8:A, 6fb8:B, 6fb9:A, 6fb9:B, 1g9y:A, 1g9y:B, 1g9z:A, 1g9z:B, 2i3p:A, 2i3p:B, 2i3q:A, 2i3q:B, 3mx9:A, 3mxb:A, 3mxb:B, 3mxb:R, 3mxb:S, 1n3e:A, 1n3e:B, 1n3e:G, 1n3e:H, 1n3f:A, 1n3f:B, 1n3f:G, 1n3f:H, 1t9i:A, 1t9i:B, 1t9j:A, 1t9j:B, 1u0c:A, 1u0c:B, 1u0d:A, 1u0d:B, 2vbj:A, 2vbj:B, 2vbl:A, 2vbl:B, 2vbn:A, 2vbn:B, 2vbo:A, 2vbo:B, 2xe0:A, 2xe0:B
30 6he6:A 117 31 0.0531 0.0940 0.3548 8.6 6hfx:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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