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BioLiP
>protein
ILGDFAASFLPAILVPAVGLVMPAVVMGLLFLQIESEA

The query sequence (length=38) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6vpv:I 38 38 1.0000 1.0000 1.0000 1.80e-19 6vpv:i, 6vpv:7
2 8am5:i 40 36 0.6053 0.5750 0.6389 2.37e-11 8asl:i, 8asp:i, 6hqb:I, 4l6v:I, 4l6v:i, 4l6v:9, 6nwa:I, 6nwa:i, 6nwa:R, 5oy0:I, 5oy0:i, 5oy0:h, 7umh:I, 7umh:R, 7umh:i, 6uzv:I, 6uzv:i, 6uzv:h
3 6kif:I 38 36 0.6842 0.6842 0.7222 2.73e-11 6kif:S, 6kif:k, 6kig:I, 6kig:S, 6kig:k
4 4fe1:I 38 38 0.6316 0.6316 0.6316 3.01e-11 7fix:I1, 7fix:I2, 7fix:I3, 1jb0:I, 6k33:aI, 6k33:bI, 6k33:cI, 6lu1:I, 7m75:I, 7m76:I, 7m78:I, 3pcq:I, 6pfy:I, 6pfy:R, 6pfy:e, 6pgk:I, 6pgk:R, 6pgk:e, 6tra:I, 6trc:I, 6trc:7, 6trc:i, 6trd:I, 6trd:7, 6trd:i, 5zf0:I1, 5zf0:I2, 5zf0:I3, 5zf0:I4, 5zf0:I5, 5zf0:I6
5 6kmw:aI 38 36 0.6053 0.6053 0.6389 8.00e-11 6kmw:cI, 6kmw:bI
6 7qco:I 39 33 0.5263 0.5128 0.6061 6.42e-08 7qco:P, 7qco:p, 7qco:i
7 7a4p:I 35 32 0.5526 0.6000 0.6562 1.44e-07 6zzx:I, 6zzy:I
8 7yca:I 35 32 0.5789 0.6286 0.6875 2.50e-07
9 7lx0:R 42 36 0.4737 0.4286 0.5000 3.34e-07 7lx0:I, 7lx0:i, 6pnj:I, 6pnj:R, 6pnj:i
10 6l4u:I 35 32 0.5000 0.5429 0.5938 6.94e-07
11 7dr0:I 30 28 0.4737 0.6000 0.6429 8.58e-07 7dr1:I, 7dr2:aI, 7dr2:bI, 7dr2:cI, 7dr2:dI
12 7y7b:I 33 32 0.4474 0.5152 0.5312 1.31e-06 7y8a:I
13 8htu:I 34 32 0.4474 0.5000 0.5312 1.47e-06 7ksq:I, 7kux:I, 6l35:I, 7xqp:I
14 8wey:I 32 31 0.4474 0.5312 0.5484 2.50e-06 7blz:I, 5zgb:I, 5zgh:I
15 7y5e:IN 31 31 0.4737 0.5806 0.5806 3.59e-06 7y5e:I2, 7y7a:I7, 7y7a:Io
16 7dz7:I 42 31 0.4211 0.3810 0.5161 2.10e-05 7bgi:I, 7blx:I, 8cmo:I, 7d0j:I, 7dz8:I, 6ijj:I, 6ijo:I, 6jo5:I, 6jo6:I, 7r3k:I, 7zq9:I, 7zq9:I2, 7zqc:I, 7zqd:I, 7zqd:I2
17 8wm6:I 34 32 0.3947 0.4412 0.4688 2.43e-05 8wmj:I, 8wmv:I, 8wmw:I
18 6igz:I 32 30 0.4474 0.5312 0.5667 3.99e-05
19 7wfd:AI 33 29 0.4211 0.4848 0.5517 4.67e-05 8j6z:I, 8j7a:I, 8j7b:I, 7wfe:BI, 7wg5:AI, 7wg5:BI
20 6k61:I 34 31 0.4211 0.4706 0.5161 6.59e-05 6jeo:aI, 6jeo:bI, 6jeo:cI, 6jeo:dI, 6k61:i, 6tcl:I1, 6tcl:I2, 6tcl:I, 6tcl:II, 7y3f:I
21 6ly5:i 33 28 0.3947 0.4545 0.5357 3.93e-04 7dkz:I, 5l8r:I, 3lw5:I, 2o01:I, 2wsc:I, 2wse:I, 2wsf:I, 4xk8:i, 6yac:I, 6yez:I, 6zoo:I, 6zxs:I
22 6kmx:aI 41 35 0.3421 0.3171 0.3714 4.22e-04 6kmx:cI, 6kmx:bI
23 7s3d:I 42 35 0.3421 0.3095 0.3714 4.69e-04 7s3d:i, 7s3d:R
24 8bcv:I 33 29 0.3947 0.4545 0.5172 4.84e-04 8bcw:I, 7ew6:I, 7ewk:I, 7f9o:I, 7f9o:l, 5zji:I
25 6sl5:I 39 29 0.3421 0.3333 0.4483 0.040
26 8jze:i 119 21 0.3158 0.1008 0.5714 0.052 8jzf:i
27 8jjr:i 120 21 0.3158 0.1000 0.5714 0.26
28 5kzm:B 395 17 0.2105 0.0203 0.4706 2.4
29 4e37:B 480 25 0.2632 0.0208 0.4000 2.4 4e37:A, 4e37:C, 4e37:D
30 4j0m:A 724 29 0.3158 0.0166 0.4138 2.6 4j0m:B
31 2a9e:A 491 25 0.2632 0.0204 0.4000 5.0 2a9e:B, 2iqf:A, 2iqf:B, 1qwl:A, 1qwl:B, 1qwm:A, 1qwm:B
32 7jmq:B 396 25 0.2368 0.0227 0.3600 7.7 1a50:B, 1a5a:B, 1a5b:B, 1a5s:B, 8b03:B, 8b05:B, 8b06:B, 8b08:B, 1beu:B, 1bks:B, 5bw6:B, 1c29:B, 6c73:B, 1c8v:B, 1c9d:B, 3cep:B, 5cgq:B, 2cle:B, 2clf:B, 2clh:B, 2cli:B, 2clk:B, 2cll:B, 2clm:B, 2clo:B, 1cw2:B, 1cx9:B, 6d0v:B, 2dh5:A, 6duc:B, 6dz4:B, 6dzo:B, 1fuy:B, 4hn4:B, 4hpj:B, 4hpx:B, 4ht3:B, 2j9x:B, 2j9y:B, 2j9z:B, 7jhw:B, 7jll:B, 7jqw:B, 7jtt:B, 7k0b:B, 1k3u:B, 7k5a:B, 1k7e:B, 1k7f:B, 1k7x:B, 1k8x:B, 1k8y:B, 1k8z:B, 7ka1:B, 7kbn:B, 1kfb:B, 1kfc:B, 1kfe:B, 1kfj:B, 1kfk:B, 7kh6:B, 7ki7:B, 4kkx:B, 7kmc:B, 7kq9:B, 7kqf:B, 7ku9:B, 7kwv:B, 7kxc:B, 7kyt:B, 7l03:B, 7l1h:B, 7l47:B, 7l4d:B, 7l5h:B, 7lev:B, 7lgx:B, 7lkl:B, 7lpf:B, 7lt4:B, 7ltp:B, 7lut:B, 7lv5:B, 7lvx:B, 7lx1:B, 7ly8:B, 7m2l:B, 7m3s:B, 7me8:B, 7mt4:B, 7mt5:B, 7mt6:B, 6o1h:B, 3pr2:B, 1qop:B, 1qoq:B, 2rh9:B, 1tjp:B, 2trs:B, 2tsy:B, 1ttp:B, 1ttq:B, 2tys:B, 1ubs:B, 6vfd:B, 6vnt:B, 1wbj:B, 6wdu:B, 2wsy:B, 4wx2:B, 6wx3:B, 6x0c:B, 6xe3:B, 6xin:B, 6xnc:B, 6xoy:B, 6xrh:B, 6xsy:B, 6xt0:B, 4xug:B, 4y6g:B, 4zqc:B
33 2rhg:B 364 25 0.2368 0.0247 0.3600 8.9
34 1qxo:A 388 20 0.2632 0.0258 0.5000 9.7 1qxo:B, 1qxo:C, 1qxo:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218