BioLiP

>protein
IDTFSRTGPLMEAASYPAWTQQLIQDCSESKRRVVEHELYQRMRDNKLSAKVMRQYLIGGWPVVEQFALYMAQNLTKTRF
ARHPGEDMARRWLMRNIRVELNHADYWVHWSRAHGVTLEDLQAQQVPPELHALSHWCWHTSSADSLIVAIAATNYAIEGA
TGEWSALVCSNGIYAAAFPEEDRKRAMKWLKMHAQYDDAHPWEALEIIVTLAGLNPTKALQAELRQAICKSYDYMYLFLE
RCMQQEKTAVTRERLA

The query sequence (length=256) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4wwj:A	256	256	1.0000	1.0000	1.0000	0.0	6p5q:A, 6p5q:B, 4wwj:B, 4wwz:A, 4wwz:B, 4wx0:A, 4wx0:B
2	3bkj:H	224	82	0.0898	0.1027	0.2805	0.008	3bae:H
3	1rcw:B	214	131	0.1289	0.1542	0.2519	0.016	1rcw:A, 1rcw:C
4	7bxv:H	217	115	0.1172	0.1382	0.2609	0.063
5	1eap:B	216	94	0.0938	0.1111	0.2553	0.44
6	8ffi:A	419	92	0.0938	0.0573	0.2609	2.2	8ffi:E, 8ffi:I, 8ffi:M, 8i87:G, 8i87:O, 8i87:A, 8i87:C, 8j7s:B, 8j7s:F, 8j7s:J, 8j7s:N, 8jr8:B, 8jr8:D, 8oz6:A, 8oz6:C, 8oz6:E, 8oz6:G, 8ozd:A, 8ozd:C, 8oze:E, 8oze:G, 8ozf:A, 8ozf:C, 8ozf:F, 8ozf:H, 8ozg:A, 8ozg:C, 8ozg:F, 8ozg:H, 8ozi:A, 8ozi:C, 8ozi:E, 8ozi:G, 8sp0:A, 8sp0:E, 8sp3:A, 8sp3:E, 8spo:A
7	4bkl:A	216	63	0.0664	0.0787	0.2698	2.4
8	7u8c:H	214	94	0.0898	0.1075	0.2447	2.6
9	6xj3:A	241	92	0.0898	0.0954	0.2500	4.3	6xj3:B, 6xj3:C, 6xj3:D
10	8spo:I	371	32	0.0469	0.0323	0.3750	5.5
11	2hrp:H	226	97	0.0898	0.1018	0.2371	5.6	2hrp:N
12	1etz:H	228	91	0.0859	0.0965	0.2418	5.7	1etz:B
13	8spo:M	394	32	0.0469	0.0305	0.3750	6.4	8spo:E
14	8r3r:A	658	36	0.0469	0.0182	0.3333	7.6	8r3r:B, 8r3r:C, 8r3r:D
15	3wem:A	830	41	0.0547	0.0169	0.3415	8.1	3w37:A, 3wel:A, 3wen:A, 3weo:A

[Back]