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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
IDARNLFEYHCAKCHGLTGEANKRGKALKAPDLCDPGWQNSKTDKEILYSITNGKNKMPAWNERLTPEEIEALARYVRKL
S

The query sequence (length=81) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7o38:A 81 81 1.0000 1.0000 1.0000 1.42e-57
2 5mxy:A 83 79 0.3704 0.3614 0.3797 1.17e-13 5mxz:A
3 6r6m:B 100 71 0.3210 0.2600 0.3662 2.60e-13 6r6n:B, 6r6o:B
4 7vzg:c 145 71 0.3457 0.1931 0.3944 3.14e-12 7vzr:c
5 4eie:A 82 76 0.3457 0.3415 0.3684 9.19e-12 4eif:A
6 4gyd:A 86 77 0.3580 0.3372 0.3766 1.46e-11 4gyd:B, 4gyd:C, 4gyd:D, 4gyd:E, 4gyd:F, 4h0j:A, 4h0j:B, 4h0j:C, 4h0j:D, 4h0j:E, 4h0j:F, 4h0k:A, 4h0k:B
7 1kib:A 89 75 0.3333 0.3034 0.3600 5.41e-10 1f1f:A, 1kib:B, 1kib:C, 1kib:D, 1kib:E, 1kib:F, 1kib:G, 1kib:H
8 7vzg:C 193 85 0.3580 0.1503 0.3412 1.76e-09 7vzr:C
9 1ls9:A 91 76 0.3210 0.2857 0.3421 1.99e-09
10 1c6s:A 87 72 0.3333 0.3103 0.3750 3.31e-09 6tr1:A, 6tr1:C, 6tr1:E, 6tsy:A, 6tsy:B, 6tsy:C, 6tsy:D, 6tsy:E, 6tsy:F
11 1gdv:A 85 76 0.3704 0.3529 0.3947 5.62e-09
12 1cyj:A 90 78 0.3580 0.3222 0.3718 5.75e-09 1cyi:A
13 3dmi:A 87 72 0.3333 0.3103 0.3750 7.61e-09
14 5xdh:A 86 53 0.2346 0.2209 0.3585 4.03e-08 5xdh:B, 5xdh:C, 5xdh:D
15 2zbo:A 86 79 0.3333 0.3140 0.3418 4.08e-08 2zbo:C, 2zbo:E, 2zbo:G, 2zbo:I, 2zbo:K
16 6hwh:i 162 76 0.3086 0.1543 0.3289 7.85e-08 6hwh:j
17 6hwh:i 162 81 0.2840 0.1420 0.2840 0.014 6hwh:j
18 6adq:C 223 76 0.3086 0.1121 0.3289 1.09e-07 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
19 6adq:C 223 81 0.2840 0.1031 0.2840 0.015 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
20 1a2s:A 89 78 0.3210 0.2921 0.3333 1.62e-07 1ced:A, 1ctj:A
21 5djq:C 303 75 0.3210 0.0858 0.3467 5.68e-07 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
22 5djq:C 303 81 0.3457 0.0924 0.3457 2.33e-06 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
23 7y5e:GN 84 76 0.3333 0.3214 0.3553 9.49e-07 7y5e:G2, 7y7a:G7, 7y7a:Go
24 1c6o:A 89 74 0.2963 0.2697 0.3243 9.73e-07 1c6o:B, 1c6r:A
25 3ph2:B 85 72 0.3457 0.3294 0.3889 4.43e-06 2v08:A, 2v08:B
26 3dr0:A 93 72 0.2963 0.2581 0.3333 1.17e-05 3dr0:B, 3dr0:C, 4eic:A, 4eid:A
27 7e1w:O 223 75 0.2716 0.0987 0.2933 4.78e-05 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
28 7e1w:O 223 85 0.2716 0.0987 0.2588 0.30 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
29 2dge:A 102 87 0.3333 0.2647 0.3103 6.40e-05 2ce0:A, 2ce1:A, 2dge:C, 2dge:B, 2dge:D, 2v07:A
30 8smr:G 312 81 0.3210 0.0833 0.3210 1.02e-04
31 8smr:G 312 73 0.2840 0.0737 0.3151 2.21e-04
32 7qhm:C 233 76 0.2346 0.0815 0.2500 1.62e-04 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
33 8snh:G 304 74 0.2840 0.0757 0.3108 2.43e-04
34 6btm:E 161 80 0.3210 0.1615 0.3250 3.58e-04
35 7o9u:A 153 80 0.2840 0.1503 0.2875 4.61e-04
36 6f0k:E 182 84 0.3086 0.1374 0.2976 6.19e-04
37 2c8s:A 149 82 0.3086 0.1678 0.3049 8.26e-04
38 6xkw:p 254 78 0.3086 0.0984 0.3205 0.001 6xkx:p, 6xkz:p
39 4kmg:A 88 73 0.2716 0.2500 0.3014 0.008
40 8hdd:B 121 85 0.2840 0.1901 0.2706 0.016
41 1b7v:A 71 81 0.3086 0.3521 0.3086 0.033 1c75:A, 1k3g:A, 1k3h:A, 1n9c:A
42 2zzs:A 81 81 0.3210 0.3210 0.3210 0.15 2zzs:B, 2zzs:C, 2zzs:D, 2zzs:E, 2zzs:F, 2zzs:G, 2zzs:H, 2zzs:I, 2zzs:J, 2zzs:K, 2zzs:L, 2zzs:M, 2zzs:N, 2zzs:O, 2zzs:P, 2zzs:Q, 2zzs:R, 2zzs:S, 2zzs:T, 2zzs:U, 2zzs:V, 2zzs:W, 2zzs:X, 2zzs:Y, 2zzs:Z, 2zzs:1, 2zzs:2, 2zzs:3, 2zzs:4, 2zzs:5, 2zzs:6
43 1kv9:A 664 79 0.2963 0.0361 0.3038 0.27
44 7w2j:C 418 89 0.3086 0.0598 0.2809 0.30 8jej:C, 8jek:C, 8k6j:C, 8k6k:C, 7w2j:F, 7wsq:C, 7wsq:F, 8xcm:C, 8xcn:C
45 1gjq:A 541 79 0.2840 0.0425 0.2911 0.34 1bl9:A, 1bl9:B, 1gjq:B, 5guw:M, 5guw:N, 1hzu:A, 1hzv:A, 1n15:A, 1n15:B, 1n50:A, 1n50:B, 1n90:A, 1n90:B, 1nir:A, 1nir:B, 1nno:A, 1nno:B, 6tpo:A, 6tsi:A, 6tsi:B
46 5lo9:A 471 78 0.2963 0.0510 0.3077 0.38 5lo9:B
47 5lo9:A 471 71 0.2346 0.0403 0.2676 0.58 5lo9:B
48 6h5l:B 220 81 0.2593 0.0955 0.2593 0.50
49 1yiq:A 684 76 0.2469 0.0292 0.2632 0.56
50 1aom:B 559 79 0.3086 0.0447 0.3165 0.58 1aof:A, 1aof:B, 1aom:A, 1aoq:A, 1aoq:B, 1dy7:A, 1dy7:B, 1e2r:A, 1e2r:B, 1gq1:A, 1gq1:B, 1h9x:A, 1h9x:B, 1h9y:A, 1h9y:B, 1hcm:A, 1hcm:B, 1hj3:A, 1hj3:B, 1hj4:A, 1hj4:B, 1hj5:A, 1hj5:B, 1qks:A, 1qks:B
51 7ytj:E 650 51 0.1852 0.0231 0.2941 0.62
52 3dp5:A 99 62 0.2346 0.1919 0.3065 0.78 3cu4:A, 5mcs:A, 6u97:A
53 1gks:A 78 69 0.2593 0.2692 0.3043 0.81
54 4hg3:A 304 34 0.1605 0.0428 0.3824 1.0 4hg3:B, 4hg3:C, 4hg3:D, 4hg5:A, 4hg5:B, 4hg5:C, 4hg5:D, 4hgd:A, 4hgd:B, 4hgd:C, 4hgd:D
55 2yev:B 319 90 0.2963 0.0752 0.2667 1.3 2yev:E
56 6lod:E 157 63 0.1975 0.1019 0.2540 1.4 6loe:E
57 8k9e:E 164 28 0.1358 0.0671 0.3929 1.6 8k9f:E, 8x2j:E
58 5wze:B 449 34 0.1358 0.0245 0.3235 1.8 5wze:A, 5wze:C, 5wze:D
59 3ia7:A 397 36 0.1605 0.0327 0.3611 1.8 3ia7:B
60 7p43:B 690 23 0.0988 0.0116 0.3478 1.9 7p43:A
61 6asy:A 606 32 0.1728 0.0231 0.4375 3.0 7a4v:A, 6asy:B, 6cz1:A, 6cz1:B, 6dfm:A, 6dfm:B, 6dfo:A, 6dfo:B, 6do2:A, 6do2:B, 6dws:A, 6dws:B, 5e84:A, 5e84:B, 5e84:C, 5e84:D, 5e84:E, 5e84:F, 6eoe:A, 6eof:A, 5evz:A, 5evz:B, 5ex5:A, 5ex5:B, 5exw:A, 5exw:B, 5ey4:A, 5ey4:B, 5f0x:A, 5f0x:B, 5f1x:A, 5f1x:B, 5f2r:A, 5f2r:B, 3iuc:A, 3iuc:C, 3ldl:A, 3ldl:B, 3ldo:A, 3ldo:B, 3ldp:A, 3ldp:B, 7n1r:A, 7n1r:B, 6zmd:A, 6zyh:A, 6zyh:B
62 4me3:A 246 27 0.1235 0.0407 0.3704 3.1
63 3a0b:V 137 15 0.0864 0.0511 0.4667 3.6 3a0b:v, 3a0h:V, 3a0h:v, 2axt:V, 2axt:v, 5b5e:V, 5b5e:v, 5b66:V, 5b66:v, 7cji:V, 7cji:v, 7cjj:V, 7cjj:v, 7cou:V, 7cou:v, 7d1t:V, 7d1t:v, 7d1u:V, 7d1u:v, 6dhe:V, 6dhe:v, 6dhf:V, 6dhf:v, 6dhg:V, 6dhg:v, 6dhh:V, 6dhh:v, 6dho:V, 6dho:v, 6dhp:V, 6dhp:v, 5e79:V, 5e79:v, 5e7c:V, 5e7c:v, 7eda:V, 9evx:V, 9evx:v, 8ez5:V, 8ez5:v, 8f4c:V, 8f4c:v, 8f4d:V, 8f4d:v, 8f4e:V, 8f4e:v, 8f4f:V, 8f4f:v, 8f4g:V, 8f4g:v, 8f4h:V, 8f4h:v, 8f4i:V, 8f4i:v, 8f4j:V, 8f4j:v, 8f4k:V, 8f4k:v, 4fby:V, 4fby:i, 8gn0:V, 8gn0:v, 8gn1:V, 8gn1:v, 8gn2:V, 8gn2:v, 5gth:V, 5gth:v, 5gti:V, 5gti:v, 5h2f:V, 5h2f:v, 4il6:V, 4il6:v, 8ir5:V, 8ir5:v, 8ir6:V, 8ir6:v, 8ir7:V, 8ir7:v, 8ir8:V, 8ir8:v, 8ir9:V, 8ir9:v, 8ira:V, 8ira:v, 8irb:V, 8irb:v, 8irc:V, 8irc:v, 8ird:V, 8ird:v, 8ire:V, 8ire:v, 8irf:V, 8irf:v, 8irg:V, 8irg:v, 8irh:V, 8irh:v, 8iri:V, 8iri:v, 4ixq:V, 4ixq:v, 4ixr:V, 4ixr:v, 1izl:V, 1izl:0, 6jlj:V, 6jlj:v, 6jlk:V, 6jlk:v, 6jll:V, 6jll:v, 6jlm:V, 6jlm:v, 6jln:V, 6jln:v, 6jlo:V, 6jlo:v, 6jlp:V, 6jlp:v, 5kaf:V, 5kaf:v, 5kai:V, 5kai:v, 3kzi:V, 5mx2:V, 5mx2:v, 1mz4:A, 4pbu:V, 4pbu:v, 4pj0:V, 4pj0:v, 7rf1:V, 7rf1:v, 7rf2:V, 7rf2:v, 7rf3:V, 7rf3:v, 7rf4:V, 7rf4:v, 7rf5:V, 7rf5:v, 7rf6:V, 7rf6:v, 7rf7:V, 7rf7:v, 7rf8:V, 7rf8:v, 4rvy:V, 4rvy:v, 1s5l:V, 1s5l:v, 5tis:V, 5tis:v, 4tnh:V, 4tnh:v, 4tni:V, 4tni:v, 4tnj:V, 4tnj:v, 4tnk:V, 4tnk:v, 4ub6:V, 4ub6:v, 4ub8:V, 4ub8:v, 5v2c:V, 5v2c:v, 4v62:AV, 4v62:BV, 4v82:AV, 4v82:BV, 6w1o:V, 6w1o:v, 6w1p:V, 6w1p:v, 6w1q:V, 6w1q:v, 6w1r:V, 6w1r:v, 6w1t:V, 6w1t:v, 6w1u:V, 6w1u:v, 6w1v:V, 6w1v:v, 1w5c:T, 1w5c:V, 5ws5:V, 5ws5:v, 5ws6:V, 5ws6:v, 3wu2:V, 3wu2:v, 7yq2:V, 7yq2:v, 7yq7:V, 7yq7:v, 5zzn:V, 5zzn:v
64 2xhi:A 316 46 0.1481 0.0380 0.2609 4.0 7ayy:AAA, 7ayy:BBB, 7ayy:CCC, 7ayy:DDD, 7ayy:EEE, 1ebm:A, 1fn7:A, 1hu0:A, 2i5w:A, 3ih7:A, 3ktu:A, 1lwv:A, 1lww:A, 1lwy:A, 1m3h:A, 1m3q:A, 1n39:A, 1n3a:A, 1n3c:A, 2nob:A, 2noe:A, 2nof:A, 2noh:A, 2noi:A, 2nol:A, 2noz:A, 6rlw:AAA, 6rlw:BBB, 6rlw:CCC, 6rlw:DDD, 6rlw:EEE, 6w0m:A, 6w0r:A, 6w13:A, 1yqk:A, 1yql:A, 1yqm:A, 1yqr:A
65 5fl3:A 354 17 0.1235 0.0282 0.5882 4.2
66 7uy5:I 528 31 0.1358 0.0208 0.3548 4.5
67 7uy7:A 552 31 0.1358 0.0199 0.3548 4.5
68 1b30:A 302 36 0.1728 0.0464 0.3889 4.6 1b3v:A, 1b3w:A, 1b3x:A, 1b3y:A, 1b3z:A, 1bg4:A
69 4pv4:A 436 34 0.1358 0.0252 0.3235 5.6 4pv4:B
70 6fop:A 717 39 0.1605 0.0181 0.3333 5.6
71 1hro:A 105 28 0.1235 0.0952 0.3571 6.7 1hro:B
72 4l9o:A 330 37 0.1481 0.0364 0.3243 8.3 4l9o:B
73 4yuu:V1 129 40 0.1605 0.1008 0.3250 9.4 4yuu:v1, 4yuu:V2, 4yuu:v2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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