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BioLiP
>protein
HTIYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSFRKEKMRGQAHIVFKEVSSASNALRALQGFPFYGKPMRIQ

The query sequence (length=76) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8ro1:p 76 76 1.0000 1.0000 1.0000 7.87e-53
2 4pkd:B 240 76 0.6974 0.2208 0.6974 2.03e-36 1aud:A, 7b0y:c, 3bo2:A, 3bo3:A, 3bo4:A, 4c4w:A, 4c4w:E, 3cul:A, 3cul:B, 3cun:A, 3cun:B, 7d7v:C, 5ddo:G, 5ddo:C, 5ddp:D, 5ddp:C, 5ddq:D, 5ddq:C, 5ddr:D, 5ddr:C, 7dlz:A, 7dlz:B, 1drz:A, 7dwh:A, 7dwh:B, 1dz5:A, 1dz5:B, 3egz:A, 5fj4:A, 5fj4:E, 3g8s:A, 3g8s:B, 3g8s:C, 3g8s:D, 3g8t:A, 3g8t:B, 3g8t:C, 3g8t:D, 3g96:A, 3g96:B, 3g96:C, 3g96:D, 3g9c:A, 3g9c:B, 3g9c:C, 3g9c:D, 8gxb:C, 8gxb:D, 8gxb:F, 8gxc:C, 8gxc:D, 8gxc:F, 3hhn:B, 3hhn:D, 3iin:A, 3irw:P, 3iwn:C, 3iwn:D, 8jy0:A, 8jy0:C, 8jy0:E, 3k0j:A, 3k0j:B, 3l3c:A, 3l3c:B, 3l3c:C, 3l3c:D, 6las:E, 6las:D, 6las:C, 6lau:E, 6lau:D, 6lau:C, 6lax:D, 6lax:E, 6lax:C, 6laz:D, 6laz:E, 6laz:C, 1m5k:C, 1m5k:F, 1m5o:C, 1m5o:F, 1m5p:C, 1m5p:F, 1m5v:C, 1m5v:F, 3mum:P, 3mur:P, 3mut:P, 3muv:P, 3mxh:P, 2nz4:A, 2nz4:B, 2nz4:C, 2nz4:D, 2oih:A, 2oj3:A, 3p49:B, 4pr6:A, 4prf:A, 7qr3:A, 7qr3:B, 7qr4:A, 6qx9:1A, 3r1h:A, 3r1h:D, 3r1l:A, 3r1l:D, 1sj3:P, 1sj4:P, 1sjf:A, 6sqn:A, 6sqn:B, 6sqn:C, 6sqq:AAA, 6sqq:BBB, 6sqq:CCC, 1u6b:A, 3ucu:P, 3ucz:P, 3ud3:P, 3ud4:P, 1urn:A, 1urn:B, 1urn:C, 1vbx:A, 1vby:A, 1vbz:A, 1vc0:A, 1vc5:A, 1vc6:A, 7vpx:M, 4w90:B, 4w92:B, 1zzn:A
3 6xh2:A 93 76 0.6447 0.5269 0.6447 2.65e-35 6cmn:A, 3k0j:D, 3k0j:C, 6xh0:A, 6xh1:A, 6xh3:A
4 7abg:B 169 76 0.6316 0.2840 0.6316 6.09e-35 7a5p:X, 1a9n:B, 1a9n:D, 7abi:B, 6ah0:p, 6ahd:p, 8c6j:Y, 8ch6:s, 7evo:G, 9fmd:p, 8h6e:2C, 8h6j:2C, 8h6k:2C, 8h6l:2C, 8hk1:G, 8i0p:p, 8i0r:p, 8i0s:p, 8i0t:p, 8i0u:p, 8i0v:p, 8i0w:p, 6icz:p, 6id0:p, 6id1:p, 5mqf:X, 6qdv:Y, 8qo9:2B, 6qx9:2B, 8qxd:2B, 8qzs:2B, 8r08:2B, 8r09:2B, 8r0a:2B, 8r0b:2B, 8rm5:2B, 7vpx:G, 7w59:p, 7w5a:p, 7w5b:p, 5xjc:p, 6y53:b, 6y5q:b, 5yzg:p, 5z56:p, 5z57:p, 5z58:p
5 6f4h:C 96 75 0.6184 0.4896 0.6267 1.42e-27 6f4g:B, 6f4g:E, 6f4h:A, 6f4h:E
6 3jb9:k 89 75 0.4605 0.3933 0.4667 3.42e-25
7 7b9v:Y 88 77 0.3947 0.3409 0.3896 2.37e-14 6bk8:r, 7dco:p, 6exn:Y, 6g90:Y, 5gmk:a, 6j6g:a, 6j6h:a, 6j6n:a, 6j6q:a, 5lj3:Y, 5lj5:Y, 5mq0:Y, 5nrl:Y, 7oqb:Y, 7oqe:Y, 5wsg:X, 5y88:p, 5ylz:p, 5zwm:p, 5zwo:p
8 3lqv:B 115 64 0.2500 0.1652 0.2969 5.66e-06 2f9j:B, 3lqv:A, 7q4o:F, 8qo9:B6, 8qxd:B6, 8qzs:B6, 8r08:B6, 8r09:B6, 8r0a:B6, 8r0b:B6, 8rm5:B6
9 7q33:A 93 76 0.3289 0.2688 0.3289 1.17e-05 6pai:D, 6q0r:D, 6q0v:D, 6q0w:D, 6sj7:C, 6ud7:C, 6ue5:C
10 7s7b:C 79 77 0.3289 0.3165 0.3247 0.002 7s7b:G, 7s7c:C
11 6snj:A 131 86 0.3289 0.1908 0.2907 0.009 6gbm:B
12 8i0v:4 161 79 0.2895 0.1366 0.2785 0.011
13 2yka:A 124 76 0.2632 0.1613 0.2632 0.013
14 8xxm:3G 84 71 0.2895 0.2619 0.3099 0.040 5k0y:O, 8pj1:o, 8pj2:o, 8pj3:o, 8pj4:o, 8pj5:o, 8pj6:o
15 2adb:A 127 63 0.2632 0.1575 0.3175 0.079 3zzy:A, 3zzy:B, 3zzz:A, 3zzz:B
16 2mgz:B 105 46 0.1842 0.1333 0.3043 0.23 4ch1:A, 4cio:A, 2ru3:A
17 7dvq:Y 140 57 0.1842 0.1000 0.2456 0.27 8i0p:Y, 8i0r:Y
18 8esq:o 137 57 0.2105 0.1168 0.2807 0.29 8esr:o, 8etg:o, 8eth:o, 8eti:o, 8eup:o, 8euy:o, 8ev3:o
19 8pv1:CI 152 53 0.2368 0.1184 0.3396 0.34 8i9p:CI, 8i9r:CI, 8i9t:CI, 8i9v:CI, 8i9w:CI, 8i9x:CI, 8i9y:CI, 8i9z:CI, 8ia0:CI, 8pv3:CI, 8pv4:CI, 8pv7:CI, 8pvk:CI
20 8h6e:4R 106 74 0.2368 0.1698 0.2432 0.40 8h6j:4R, 8qp8:R, 8qp9:R, 8qpk:R, 6qw6:R, 6qx9:R, 8qxd:R, 8r08:R, 8r0a:R
21 2adc:A 208 77 0.2895 0.1058 0.2857 1.1
22 7pp2:A 442 49 0.1974 0.0339 0.3061 6.4
23 7csz:A 175 40 0.1447 0.0629 0.2750 6.5
24 7un8:A 297 26 0.1316 0.0337 0.3846 8.9 7un8:B, 7un8:C, 7un8:D, 7un8:E, 7un8:F, 7un9:A, 7un9:B, 7un9:C, 7un9:D, 7un9:I, 7un9:J, 7un9:E, 7un9:F, 7un9:K, 7un9:L, 7una:A, 7una:B, 7una:C
25 3zxk:A 530 31 0.1447 0.0208 0.3548 9.9 3zxk:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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