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BioLiP
>protein
HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC

The query sequence (length=50) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3uej:A 65 50 1.0000 0.7692 1.0000 6.34e-34 7knd:A, 7knj:A, 7ko6:A, 7l92:A, 7l92:D, 7l92:G, 7l92:J, 7l92:M, 7l92:V, 7l92:P, 7l92:S, 7lcb:A, 7leo:A, 7leo:D, 7lf3:A, 1ptq:A, 1ptr:A, 3uej:B, 3uey:A, 3uey:B, 3uff:A, 3uff:B, 3ugd:A, 3ugd:B, 3ugi:A, 3ugi:B, 3ugl:A, 3ugl:B
2 4fkd:A 65 50 0.8000 0.6154 0.8000 7.75e-28
3 2enz:A 65 50 0.8000 0.6154 0.8000 1.07e-27
4 3pfq:A 523 50 0.6200 0.0593 0.6200 5.82e-21 1a25:A, 1a25:B, 2i0e:A, 2i0e:B
5 2eli:A 85 50 0.6200 0.3647 0.6200 1.40e-19
6 1tbn:A 66 50 0.6200 0.4697 0.6200 4.63e-19 1tbo:A
7 6uwa:A 187 50 0.6200 0.1658 0.6200 1.30e-18 1dsy:A, 3gpe:A, 2nce:A, 3twy:A, 5w4s:A
8 3cxl:A 402 50 0.4800 0.0597 0.4800 1.96e-16
9 1xa6:A 399 50 0.4600 0.0576 0.4600 3.02e-16
10 4l9m:A 522 50 0.5000 0.0479 0.5000 1.36e-14
11 5ue8:A 847 50 0.4000 0.0236 0.4000 1.55e-12 5ue8:B, 1y8f:A
12 6ra0:A 138 50 0.4600 0.1667 0.4600 7.04e-12
13 2e73:A 77 50 0.4400 0.2857 0.4400 1.23e-11
14 2yuu:A 83 50 0.4200 0.2530 0.4200 4.72e-10
15 2enn:A 77 50 0.4200 0.2727 0.4200 8.75e-10
16 7z6e:C 534 50 0.4200 0.0393 0.4200 3.19e-09 7z6e:A, 7z6e:B, 7z6e:D, 7z6e:E
17 8dgt:A 431 50 0.3400 0.0394 0.3400 1.99e-06 9axx:B, 9axy:A, 6b8u:A, 9bfb:A, 3c4c:A, 3c4c:B, 8c7x:A, 8c7x:B, 8c7y:A, 8c7y:B, 5c9c:A, 5csw:A, 5csx:A, 5ct7:A, 5ct7:B, 3d4q:A, 3d4q:B, 4dbn:A, 4dbn:B, 8dgs:A, 4e26:A, 4e26:B, 4e4x:A, 4e4x:B, 4ehe:A, 4ehe:B, 4ehg:A, 4ehg:B, 8f7o:A, 8f7o:B, 8f7p:A, 8f7p:B, 2fb8:A, 2fb8:B, 4fc0:B, 5fd2:A, 4g9c:A, 4g9c:B, 4g9r:A, 4g9r:B, 4h58:A, 5hid:A, 5hid:B, 5hie:A, 5hie:B, 3idp:B, 3idp:A, 3ii5:A, 3ii5:B, 5j18:A, 5j2r:A, 5jrq:A, 5jsm:A, 5jsm:B, 5jsm:C, 5jsm:D, 5jt2:A, 4jvg:B, 4jvg:A, 4jvg:C, 4jvg:D, 7k0v:A, 7k0v:B, 7k0v:C, 7k0v:D, 4ksp:A, 4ksp:B, 4ksq:A, 4ksq:B, 7m0t:A, 7m0u:A, 7m0v:A, 7m0w:A, 7m0x:A, 7m0y:A, 7m0z:A, 4mbj:A, 4mbj:B, 7mfd:A, 7mfe:A, 7mff:A, 7mff:B, 4mnf:A, 4mnf:B, 6n0p:A, 6n0p:B, 6n0q:A, 6nsq:A, 6nyb:A, 6p3d:A, 7p3v:A, 7p3v:B, 6p7g:A, 6p7g:B, 6p7g:C, 6p7g:D, 3ppj:A, 3ppj:B, 3ppk:A, 3ppk:B, 4pp7:A, 4pp7:B, 6pp9:A, 3prf:A, 3prf:B, 3pri:A, 3pri:B, 3psb:A, 3psb:B, 3psd:A, 3psd:B, 3q4c:A, 3q96:B, 8qqg:A, 8qqg:B, 8qqg:C, 4r5y:A, 4r5y:B, 4rzv:A, 4rzv:B, 7shv:A, 7shv:B, 3skc:A, 3skc:B, 3tv4:A, 3tv4:B, 3tv6:A, 3tv6:B, 6u2g:B, 6u2h:C, 6u2h:D, 6uuo:A, 1uwh:A, 1uwh:B, 1uwj:A, 1uwj:B, 6v2u:A, 6v2w:A, 6v34:A, 5vam:A, 5vam:B, 4wo5:A, 4wo5:B, 6xfp:A, 6xlo:A, 4xv9:A, 4yht:A, 4yht:B
18 2db6:A 74 46 0.3400 0.2297 0.3696 6.88e-06
19 6nf1:A 550 46 0.3000 0.0273 0.3261 1.56e-04 3bji:A, 3bji:B, 3ky9:A, 3ky9:B, 6new:A, 6nfa:A, 2vrw:B
20 6xgu:B 134 50 0.3200 0.1194 0.3200 0.001 1c1y:B, 1faq:A, 1far:A, 1gua:B, 7jhp:C, 3kuc:B, 6pts:D, 6ptw:D, 8t75:B, 8t75:D, 8t75:F, 8t75:H, 6xgv:B, 6xha:B, 6xhb:B, 6xi7:B
21 2fnf:X 59 47 0.3000 0.2542 0.3191 0.043 1rfh:A
22 4b6d:A 60 50 0.3200 0.2667 0.3200 0.065 4b6d:B, 4b6d:C, 4b6d:D, 4b6d:E, 4b6d:F
23 5hvq:C 236 32 0.2800 0.0593 0.4375 0.23 5wy5:A
24 6g18:y 325 47 0.3400 0.0523 0.3617 0.86 6g4s:y, 6g51:y, 6g53:y, 6g5i:y, 7wtw:y, 7wtx:y, 7wtz:y, 7wu0:y, 6zuo:y, 6zxd:y, 6zxe:y
25 6agg:Z 420 34 0.2400 0.0286 0.3529 0.99 3amt:A, 3amu:A, 3au7:A, 4rvz:Z, 5xob:Z
26 7aoc:L 45 33 0.2200 0.2444 0.3333 1.1 7aod:L, 7aod:X, 7aoe:L, 3h0g:L, 3h0g:X
27 6zxf:y 233 17 0.1800 0.0386 0.5294 1.2
28 2row:A 84 41 0.2800 0.1667 0.3415 1.2
29 7aoc:I 57 37 0.2800 0.2456 0.3784 1.8 7aod:I, 7aod:U, 7aoe:I
30 2ct0:A 74 33 0.2800 0.1892 0.4242 2.8
31 3u9e:B 288 15 0.1800 0.0312 0.6000 3.4 3u9e:A, 3uf6:A, 3uf6:B
32 4ba0:A 781 24 0.1800 0.0115 0.3750 3.5 4b9y:A, 4b9z:A, 5i23:A, 5i24:A, 5npb:A, 5npc:A, 5npd:A, 5npe:A, 7p4c:AAA, 7p4d:AAA, 8rw3:C, 8rw3:A, 8rw3:B
33 2i7t:A 404 16 0.1800 0.0223 0.5625 3.7
34 6v4x:H 499 16 0.1800 0.0180 0.5625 3.8 6m8q:A, 6m8q:B
35 2i7v:A 433 16 0.1800 0.0208 0.5625 3.8 8t1q:A, 8t1r:A
36 8bws:L 50 33 0.2200 0.2200 0.3333 4.3 4a3b:L, 4a3c:L, 4a3d:L, 4a3e:L, 4a3f:L, 4a3g:L, 4a3i:L, 4a3j:L, 4a3l:L, 4a3m:L, 4a93:L, 2b63:L, 2b8k:L, 4bbr:L, 4bbs:L, 6blo:L, 6blp:L, 6bm2:L, 6bm4:L, 6bqf:L, 4bxx:L, 4bxz:L, 4by7:L, 4c2m:1, 4c2m:L, 4c3h:L, 4c3i:L, 4c3j:L, 5c4j:L, 8cen:L, 8ceo:L, 6cnb:L, 6cnc:L, 6cnd:L, 6cnf:L, 3cqz:L, 2e2h:L, 2e2i:L, 2e2j:L, 6eu0:L, 6eu1:L, 6eu2:L, 6eu3:L, 6f41:L, 6f42:L, 6f44:L, 5fj8:L, 5fj9:L, 5fja:L, 5fmf:L, 5fyw:L, 5fz5:L, 5g5l:L, 3gtg:L, 3gtj:L, 3gtk:L, 3gtm:L, 3gtp:L, 3gtq:L, 3h3v:M, 6h67:L, 6h68:L, 6hko:L, 6hlq:L, 6hlr:L, 6hls:L, 3hou:L, 3hou:X, 3hov:L, 3how:L, 3hox:L, 3hoy:L, 3hoz:L, 1i3q:L, 3i4m:L, 3i4n:L, 1i50:L, 1i6h:L, 6i84:L, 5ip7:L, 5ip9:L, 3j0k:L, 2ja5:L, 2ja6:L, 2ja7:L, 2ja7:X, 2ja8:L, 9ja1:L, 8jch:L, 3k1f:L, 8k5p:L, 3k7a:L, 1k83:L, 7ked:L, 7kee:L, 7kef:L, 5lmx:L, 5m3f:L, 5m3m:L, 3m4o:L, 5m5w:L, 5m5x:L, 5m5y:L, 5m64:L, 7mei:L, 7mk9:L, 7ml0:L, 7ml1:L, 7ml2:L, 7ml4:L, 5n5y:L, 5n5z:L, 5n60:L, 5n61:L, 7nkx:L, 7nky:L, 2nvq:L, 2nvt:L, 2nvx:L, 2nvy:L, 2nvz:L, 7o4i:L, 7o4j:L, 6o6c:J, 7o72:L, 7o73:L, 7o75:L, 5oa1:L, 5ot2:L, 3po2:L, 3po3:L, 3qt1:L, 1r5u:L, 2r7z:L, 1r9s:L, 1r9t:L, 2r92:L, 2r93:L, 7rim:L, 7rip:L, 7riq:L, 7riw:L, 7rix:L, 7riy:L, 6rqt:L, 6ruo:L, 6rwe:L, 3rzd:L, 3rzo:L, 3s14:L, 3s15:L, 3s16:L, 3s17:L, 3s1m:L, 3s1n:L, 3s1q:L, 3s1r:L, 3s2d:L, 3s2h:L, 1sfo:L, 5sva:L, 6tps:L, 6tut:L, 8tug:L, 8tvp:L, 8tvq:L, 8tvs:L, 8tvv:L, 8tvw:L, 8tvx:L, 1twa:L, 1twc:L, 1twf:L, 1twg:L, 1twh:L, 5u5q:L, 8u9r:L, 8u9x:L, 8ukq:L, 8ukr:L, 8uks:L, 8ukt:L, 8uku:L, 6upx:L, 6upy:L, 6upz:L, 6uq0:L, 6uq1:L, 6uq2:L, 6uq3:L, 4v1m:L, 4v1n:L, 4v1o:L, 5vvr:L, 5vvs:L, 5w4u:L, 5w51:L, 5w5y:L, 5w64:L, 5w65:L, 5w66:L, 1wcm:L, 4x67:L, 4x6a:L, 1y1v:L, 1y1w:L, 4y52:L, 1y77:L, 4y7n:L, 4ym7:AL, 4ym7:BL, 4ym7:CL, 4ym7:DL, 4ym7:EL, 4ym7:FL, 2yu9:L, 7z0h:L, 7z1l:L, 7z1m:L, 7z1n:L, 7z1o:L, 7z2z:L, 7z30:L, 7z31:L, 7zs9:L, 7zsa:L, 7zsb:L
37 2hd5:A 315 18 0.1800 0.0286 0.5000 6.5
38 3nhe:A 338 18 0.1800 0.0266 0.5000 6.5 6dgf:A, 2ibi:A, 3v6c:A, 3v6e:A, 5xu8:A, 5xve:A
39 2f2h:A 773 27 0.1800 0.0116 0.3333 7.2 2f2h:B, 2f2h:C, 2f2h:D, 2f2h:E, 2f2h:F, 1xsk:A, 1xsk:B, 1xsk:C, 1xsk:E
40 7xcm:A 494 31 0.2000 0.0202 0.3226 7.2 7xcm:B, 7xcm:C, 7xcm:D, 7xcm:E, 7xcm:F, 7xcn:A, 7xcn:B, 7xcn:C, 7xcn:D, 7xcn:E, 7xcn:F
41 3qqc:A 381 13 0.1400 0.0184 0.5385 7.3
42 4qiw:A 863 13 0.1400 0.0081 0.5385 7.5 4qiw:I
43 8oki:A 901 13 0.1400 0.0078 0.5385 7.5 8cro:A, 8orq:A, 8p2i:A, 8rbo:A
44 6kf4:A 901 13 0.1400 0.0078 0.5385 7.5 9bct:A, 9bcu:A, 6kf9:A
45 1zbd:B 124 35 0.2800 0.1129 0.4000 7.5
46 7msw:A 635 25 0.2400 0.0189 0.4800 7.6 7exm:A, 7exm:B, 7exm:C, 7exm:D, 7msx:A
47 8oqz:A 665 32 0.2600 0.0195 0.4062 8.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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