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BioLiP
>protein
HMTEVFDAVYRGESPFGKRPPWDIGAPQPAYVALEKAGLIQGAVLDAGCGTGEDALHLAGLGYAVTGLDLSPTAISVARD
KADARGLGAVFEVADALDLTGWEERFDTVIDSGLAHTFEGDRLRAYATALHRACRPGAVAHILSISDRGSAEMQARLAEA
IDEIPAPLPDDDPTLKRSADHLRDGFAEGWTIESIDESLMRGVIPTTSELLDVHAWLGRFRRDWNSSSVDKLAAALEH

The query sequence (length=238) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4nec:B 244 240 1.0000 0.9754 0.9917 5.41e-171 4nec:A, 4nec:C, 4nec:D
2 7bgg:A 216 201 0.3193 0.3519 0.3781 2.26e-32 7ndm:A, 7nmk:A, 7noy:A
3 6mro:A 194 168 0.2773 0.3402 0.3929 1.34e-26 8gdu:A
4 1wzn:A 244 98 0.1597 0.1557 0.3878 1.38e-10 1wzn:B, 1wzn:C
5 1ve3:B 226 121 0.1597 0.1681 0.3140 5.04e-09 1ve3:A
6 6uv6:C 264 107 0.1849 0.1667 0.4112 9.21e-07 6uv6:A, 6uv6:B
7 3lcc:A 216 119 0.1429 0.1574 0.2857 2.58e-06
8 3ou7:A 214 120 0.1639 0.1822 0.3250 3.38e-06 3ou2:A, 3ou6:A, 3ou6:B, 3ou6:C, 3ou6:D, 3ou7:B, 3ou7:C, 3ou7:D
9 5gm2:B 282 99 0.1765 0.1489 0.4242 1.86e-05 5gm1:A, 5gm1:B, 5gm1:C, 5gm1:D, 5gm1:E, 5gm1:F, 5gm1:G, 5gm1:H, 5gm1:I, 5gm1:J, 5gm1:K, 5gm1:L, 5gm1:M, 5gm1:N, 5gm1:O, 5gm1:P, 5gm1:Q, 5gm1:R, 5gm2:A, 5gm2:C, 5gm2:D, 5gm2:E, 5gm2:F, 5gm2:G, 5gm2:H, 5gm2:I, 5gm2:J, 5gm2:L, 5gm2:M, 5gm2:N, 5gm2:O, 5gm2:P, 5gm2:Q, 5gm2:R
10 2xva:A 199 117 0.1303 0.1558 0.2650 2.45e-05 2xva:B, 2xva:C, 2xva:D, 2xvm:A, 2xvm:B
11 6uak:A 297 139 0.1681 0.1347 0.2878 5.29e-05
12 3bus:A 251 102 0.1597 0.1514 0.3725 6.49e-05 3bus:B
13 2vs1:A 398 90 0.1134 0.0678 0.3000 1.61e-04 2jjq:A
14 5wp5:A 463 67 0.1050 0.0540 0.3731 3.25e-04 5wp5:B
15 4pne:B 272 146 0.1723 0.1507 0.2808 3.62e-04 4pne:A
16 3gdh:A 211 45 0.0672 0.0758 0.3556 8.87e-04 3egi:A, 3egi:B, 3egi:C, 3egi:D, 3gdh:B, 3gdh:C
17 5wp4:A 485 78 0.1176 0.0577 0.3590 0.001
18 4kdr:A 208 69 0.1050 0.1202 0.3623 0.002 5dpm:A
19 8ajp:A 199 65 0.1050 0.1256 0.3846 0.002
20 5bp9:A 237 73 0.1050 0.1055 0.3425 0.002
21 5dpl:A 520 134 0.1387 0.0635 0.2463 0.002 5doo:A, 5dpl:B
22 8joz:A 257 147 0.1891 0.1751 0.3061 0.003 4htf:A, 4htf:B
23 5ufm:A 225 141 0.1681 0.1778 0.2837 0.003 5ufm:B, 5ufn:A, 5ufn:B
24 4qdk:A 219 70 0.1134 0.1233 0.3857 0.010 4qdj:A, 4qdk:B
25 5gm2:K 267 96 0.1513 0.1348 0.3750 0.010
26 5u1e:A 321 67 0.1008 0.0748 0.3582 0.017 5tyq:A, 5u0n:A, 5u0t:A, 5u18:A, 5u19:A, 5u1i:A, 5u4t:A
27 5mgz:A 230 110 0.1429 0.1478 0.3091 0.017 5mgz:B
28 5fcd:A 228 140 0.1681 0.1754 0.2857 0.017 5fcd:B
29 3h2b:B 196 59 0.0924 0.1122 0.3729 0.021 3h2b:A
30 4uw0:A 501 80 0.1134 0.0539 0.3375 0.024 4azw:A
31 4ax8:A 450 80 0.1134 0.0600 0.3375 0.027 4azs:A, 4azt:A, 4azv:A
32 5m58:A 230 116 0.1513 0.1565 0.3103 0.031 5m58:B
33 6bqc:A 348 118 0.1218 0.0833 0.2458 0.049
34 1l3i:A 186 44 0.0798 0.1022 0.4318 0.056 1l3i:B, 1l3i:C, 1l3i:D, 1l3i:E, 1l3i:F
35 7lxi:A 279 170 0.1849 0.1577 0.2588 0.065 7mcj:A, 7mcj:B
36 4oqd:C 241 80 0.0966 0.0954 0.2875 0.072 6m81:A, 6m81:B, 6m81:C, 6m81:D, 6m82:A, 6m83:A, 4oqd:A, 4oqd:B, 4oqd:D, 4oqe:A, 4oqe:B, 3pfg:A, 3pfh:A, 3pfh:D, 3px2:A, 3px2:D, 3px3:A, 3px3:D
37 7wtt:q 235 38 0.0672 0.0681 0.4211 0.073 6g4w:q, 7wts:q, 7wtu:q, 7wtv:q, 7wtw:q
38 2avn:A 247 138 0.1597 0.1538 0.2754 0.094 2avn:B
39 7wzg:B 243 103 0.1429 0.1399 0.3301 0.10 7wzg:A, 7wzg:C, 7wzg:D, 7wzg:E, 7wzg:F
40 5dm0:B 272 70 0.0882 0.0772 0.3000 0.16 5dly:A, 5dm0:A, 4kvz:A
41 5w7m:A 273 161 0.1933 0.1685 0.2857 0.18
42 2glu:A 234 80 0.1008 0.1026 0.3000 0.20 2glu:B
43 7qcb:A 240 124 0.1471 0.1458 0.2823 0.20
44 6cu5:A 314 102 0.1387 0.1051 0.3235 0.22 6cu5:B, 8ft7:A, 8ft7:B
45 1nbh:A 292 35 0.0630 0.0514 0.4286 0.24 1d2h:A, 1d2h:B, 1d2h:C, 1d2h:D, 2idk:B, 2idk:C, 2idk:D, 2idk:A, 1kia:A, 1kia:B, 1kia:C, 1kia:D, 1nbh:B, 1nbh:C, 1nbh:D, 1nbi:A, 1nbi:B, 1nbi:C, 1nbi:D, 3thr:A, 3thr:B, 3thr:C, 3thr:D, 3ths:B, 3ths:C, 3ths:D, 3ths:A, 1xva:A, 1xva:B
46 8khq:A 700 34 0.0672 0.0229 0.4706 0.26 8khq:B, 8khq:C, 8khq:D
47 6cx6:B 333 61 0.1008 0.0721 0.3934 0.33 6cx6:A, 5eg5:A, 4fr0:A, 4fsd:A, 4kw7:A, 4rsr:A
48 1ri1:A 252 53 0.0882 0.0833 0.3962 0.33 2hv9:A, 1ri2:A, 1ri3:A, 1ri4:A, 1z3c:A
49 3sxj:A 245 40 0.0672 0.0653 0.4000 0.38 3sxj:B, 3t0i:A, 3t0i:B
50 6hux:A 369 16 0.0630 0.0407 0.9375 0.44 4yt4:A, 4yt5:A, 4yt5:B
51 7pd7:B 250 138 0.1639 0.1560 0.2826 0.47 7pd7:A, 7pd7:C, 7pd7:D
52 7zkh:A 266 38 0.0630 0.0564 0.3947 0.51 7zkg:A, 7zkg:B
53 3i9f:B 169 44 0.0462 0.0651 0.2500 0.62 3i9f:A
54 4hh4:C 256 69 0.1008 0.0938 0.3478 0.84 4hh4:A, 4hh4:B, 4hh4:D, 4hh4:E, 4hh4:F
55 3g2p:A 251 127 0.1471 0.1394 0.2756 0.95 3g2o:A, 3g2o:B, 3g2p:B, 3g2q:A, 3g2q:B
56 6kcl:B 545 31 0.0756 0.0330 0.5806 0.95 6jwu:B, 6jwv:B, 6jwx:B, 6jwy:B
57 6jwz:B 565 31 0.0756 0.0319 0.5806 0.97 6jwr:A, 6jwr:B, 6jwv:A, 6jww:A, 6jww:B, 6jwx:A, 6jwy:A, 6kcl:A, 6kcm:A
58 6jwq:B 590 31 0.0756 0.0305 0.5806 0.98 6jwq:A, 6jws:A, 6jws:B, 6jwt:A, 6jwt:B, 6jwu:A, 6jwz:A, 6kck:A, 6kck:B, 6kcm:B
59 3kkz:A 256 48 0.0756 0.0703 0.3750 1.2 3kkz:B
60 1sg9:A 274 68 0.0798 0.0693 0.2794 1.2 1nv8:A, 1nv8:B, 1nv9:A, 1sg9:B, 1sg9:C, 1vq1:A, 1vq1:B
61 8h1b:B 193 45 0.0756 0.0933 0.4000 1.2 8h1b:A, 8h26:A, 8h26:B, 8h26:C, 8h26:D, 8h27:B
62 6uk5:A 240 38 0.0630 0.0625 0.3947 1.2 6uk5:B
63 6tl4:A 496 34 0.0630 0.0302 0.4412 1.2
64 6dnz:A 317 76 0.0924 0.0694 0.2895 1.4 6dnz:C
65 8e0e:A 322 105 0.1218 0.0901 0.2762 1.4 1t0j:B, 1t3l:A, 5v2q:A
66 5lt9:B 253 25 0.0714 0.0672 0.6800 1.5 5lt9:A, 5lto:A, 5lto:B
67 2zwv:A 373 104 0.1176 0.0751 0.2692 1.5 3dmf:A, 3dmg:A, 3dmh:A, 2zul:A
68 2cww:B 382 74 0.1176 0.0733 0.3784 1.9 2cww:A
69 5v2p:A 287 105 0.1218 0.1010 0.2762 1.9 4dey:A
70 3ggd:A 243 69 0.0756 0.0741 0.2609 2.0
71 5kok:A 348 59 0.0840 0.0575 0.3390 2.1 5koc:A, 5koc:B, 5kok:B, 5kpc:A, 5kpc:B, 5kpg:A, 5kpg:B
72 3t7s:A 246 128 0.1387 0.1341 0.2578 2.1 3t7s:B, 3t7s:C, 3t7s:D, 3t7t:A, 3t7t:B, 3t7t:C, 3t7t:D
73 5bsz:A 247 84 0.1008 0.0972 0.2857 2.2
74 5je1:A 244 58 0.0798 0.0779 0.3276 2.2 5jdy:A, 5jdy:B, 5jdz:A, 5jdz:B, 5je0:A, 5je0:B, 5je1:B, 5je2:A, 5je2:B, 5je3:A, 5je3:B, 5je4:A, 5je4:B, 5je5:A
75 3lby:A 176 51 0.0588 0.0795 0.2745 2.6
76 2yqz:A 261 37 0.0630 0.0575 0.4054 3.5 2yqz:B
77 5h02:A 252 94 0.1218 0.1151 0.3085 3.9 5gwx:A, 5hik:A, 5hil:A, 5him:A
78 4kif:B 339 63 0.0882 0.0619 0.3333 3.9 4kib:A, 4kib:B, 4kic:A, 4kic:B, 4kif:A, 4kig:A, 4kig:B, 4m6x:A, 4m6x:B, 4m6y:A, 4m6y:B, 4m71:A, 4m71:B, 4m72:A, 4m72:B, 4m73:A, 4m73:B, 4m74:A, 4m74:B
79 4rap:E 390 50 0.0672 0.0410 0.3200 4.2 4rap:A, 4rap:D, 4rap:G, 4rap:K, 4rb4:K, 4rb4:L, 4rb4:C, 4rb4:D, 4rb4:E, 4rb4:H, 4rb4:B, 4rb4:F, 4rb4:G, 4rb4:I, 4rb4:J, 4rb4:A
80 3jwh:A 191 42 0.0546 0.0681 0.3095 4.8 3jwh:B
81 4dyd:A 283 55 0.0756 0.0636 0.3273 5.6 4e13:A
82 2oyr:A 245 72 0.1092 0.1061 0.3611 6.0
83 2bh2:A 418 47 0.0672 0.0383 0.3404 6.0 2bh2:B, 1uwv:A
84 4mif:B 581 59 0.0798 0.0327 0.3220 7.1 4mif:A, 4mif:C, 4mif:D, 4mig:A, 4mig:B, 4mig:C, 4mig:D, 4mih:A, 4mih:B, 4mih:C, 4mih:D, 4mih:E, 4mih:F, 4mih:G, 4mih:H
85 6hp2:A 297 48 0.0588 0.0471 0.2917 7.2
86 1zzh:B 308 72 0.1008 0.0779 0.3333 7.9 1zzh:A, 1zzh:C, 1zzh:D
87 7wzf:A 243 46 0.0672 0.0658 0.3478 8.9
88 3tm5:A 368 110 0.1387 0.0897 0.3000 9.2 3tlj:A, 3tlj:B, 3tm4:A, 3tm4:B, 3tm5:B
89 6zxv:A 325 74 0.0756 0.0554 0.2432 9.3 6zxv:B, 6zxw:G

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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