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BioLiP
>protein
HMLTQGELMKLIKEIVENEDKRKPYSDQEIANILKEKGFKVARRTVAKYREMLGIPSSRERRI

The query sequence (length=63) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5ui5:V 323 60 0.9524 0.1858 1.0000 1.27e-35 2o8k:A, 2o9l:A, 5ui5:I
2 7qv9:M 417 52 0.4127 0.0624 0.5000 3.89e-12 8f1i:M, 8f1j:M, 8f1k:M, 7qwp:M, 7qxi:M, 8re4:M, 8rea:M
3 5nss:M 388 52 0.4127 0.0670 0.5000 4.17e-12 6gfw:M, 6gh5:M, 5nsr:M
4 6gh6:M 315 51 0.4127 0.0825 0.5098 5.16e-12
5 8reb:M 350 50 0.3968 0.0714 0.5000 4.21e-11 8rec:M, 8red:M, 8ree:M
6 7kd4:A 431 41 0.2222 0.0325 0.3415 0.14 7kd4:B, 7kd5:A
7 8p5d:SO0 129 24 0.1746 0.0853 0.4583 0.90 8p60:SO0, 8p60:RO0, 7qca:SO0
8 6qrz:A 274 49 0.1746 0.0401 0.2245 0.93
9 3d1c:A 358 27 0.1746 0.0307 0.4074 1.4
10 1dli:A 402 43 0.2540 0.0398 0.3721 1.6 1dlj:A
11 1ow8:C 142 54 0.2540 0.1127 0.2963 1.7 3b71:A, 3b71:B, 3b71:C, 6bz3:A, 6bz3:C, 1ow6:A, 1ow6:C, 1ow7:A, 1ow7:B, 1ow7:C, 1ow8:A, 6pw8:A, 7w9u:A, 7w9u:C, 7w9u:D
12 8phi:F 453 41 0.1746 0.0243 0.2683 4.3 9bjm:A, 5ea3:F, 5ea4:F, 5ea5:F, 5ea6:F, 6eag:F, 6eah:C, 6eak:F, 8kg5:A, 8kg5:C, 8kg5:B, 3kpe:A, 7kqd:F, 5kww:F, 6ntx:B, 6vkc:F, 6vkd:F, 6vke:F
13 4c5y:A 436 23 0.1746 0.0252 0.4783 4.7 4c5y:B
14 6zdu:A 693 23 0.1587 0.0144 0.4348 5.0 6zdq:A, 6zdu:B
15 2p5l:D 64 23 0.1270 0.1250 0.3478 5.1 2p5l:C, 2p5l:G, 2p5l:H
16 8xku:A 730 35 0.1746 0.0151 0.3143 5.1 8xkv:A
17 2x1e:A 354 38 0.1746 0.0311 0.2895 6.6
18 7wae:B 877 21 0.1746 0.0125 0.5238 8.2 7wad:A, 7wad:B, 7wad:C, 7wad:D, 7wae:D, 7wae:A, 7wae:C, 7waf:A, 7waf:C, 7waf:D, 7waf:B
19 2ch4:A 320 34 0.2222 0.0437 0.4118 9.2 2ch4:B, 1i58:A, 1i58:B, 1i59:A, 1i59:B, 1i5a:A, 1i5a:B, 1i5b:A, 1i5b:B, 1i5c:A, 1i5c:B, 1i5d:A, 6mi6:A, 6mi6:B, 6mi6:C, 6mi6:D, 8oyq:B, 8oyq:A, 8oyz:B, 8oyz:A, 8oz9:B, 8oz9:A, 8p3n:B, 8p3n:A, 8p3r:A, 8p3r:B, 8p59:A, 8p59:B, 8pf2:B, 8pf2:A
20 7zel:A 827 38 0.2063 0.0157 0.3421 9.2 7zel:B, 7zep:B, 7zes:A, 7zes:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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