BioLiP

>protein
HMDVVIASSGGGWQEAQDKALWAPAAKALNITYTQDTFQNWAEARAQVESGSVTWDIIQIGIADEPQAKAAGVLEKLDPD
IVNKADFPPGSVTDSFVANSNYSTLIAWNKKTYGDNGPKSMADFFDVKKFPGKRALWNQPIGMIEAAALALGTPRDKVYE
FLSTEEGRKAAIAKLTELAPSVSVWWESGAQAAQLIKDGEVDMIITWGGRVQGAINDGANFAYTFNDAQLGTDGYAIVKG
APHRDAAMRFLKEMSKAEYQKDLPNSFATAPANMKAYDLAKYTPEKMATMASAPENVAVQYSVDPNFWAKHAKWASEAYD
NVRL

The query sequence (length=324) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6tg3:D	327	324	1.0000	0.9908	1.0000	0.0	5l9g:A, 5l9g:B, 5l9i:A, 5l9i:B, 5l9l:A, 5l9l:B, 6tg2:A, 6tg2:B, 6tg2:C, 6tg2:D, 6tg3:A, 6tg3:B, 6tg3:C
2	4euo:A	313	313	0.3333	0.3450	0.3450	6.74e-41
3	6hly:A	320	328	0.3148	0.3187	0.3110	4.28e-32	6hlz:A, 6hlz:B, 6hm2:A, 6hm2:B, 6hm2:C, 6hm2:D, 6hm2:E
4	8jv1:A	360	351	0.3148	0.2833	0.2906	1.36e-28	8jv2:A, 8jv4:A
5	1poy:1	323	223	0.1481	0.1486	0.2152	0.010	1pot:A, 1poy:2, 1poy:3, 1poy:4
6	2b9i:A	338	80	0.0772	0.0740	0.3125	0.84	2b9f:A, 2b9h:A, 2b9j:A, 2f49:A, 2f49:B, 2f9g:A
7	4bz4:B	204	49	0.0463	0.0735	0.3061	1.6	4bz4:A, 4bz4:C, 4bz4:D, 4bz4:E, 4bz4:F
8	1php:A	394	39	0.0494	0.0406	0.4103	3.2
9	3zlb:A	398	94	0.0802	0.0653	0.2766	5.7
10	3pgk:A	415	91	0.0895	0.0699	0.3187	6.8	1qpg:A
11	2vp1:A	313	33	0.0340	0.0351	0.3333	7.3	2vp1:B
12	5tu0:A	385	51	0.0463	0.0390	0.2941	8.0
13	6g7n:A	318	33	0.0340	0.0346	0.3333	8.6	6g7n:B, 6g7p:B, 6g7p:A
14	1ltk:C	424	39	0.0463	0.0354	0.3846	8.7	1ltk:A, 1ltk:B
15	4qa0:A	371	40	0.0494	0.0431	0.4000	9.3	5bwz:A, 5bwz:B, 5d1b:A, 5d1b:B, 5d1c:A, 5d1c:B, 5d1d:A, 5d1d:B, 5dc5:A, 5dc5:B, 5dc6:A, 5dc6:B, 5dc7:A, 5dc7:B, 5dc8:A, 5dc8:B, 3ew8:A, 3ewf:A, 3ewf:B, 3ewf:C, 3ewf:D, 3ezp:A, 3ezp:B, 3ezt:A, 3ezt:B, 3f06:A, 3f06:B, 3f07:A, 3f07:B, 3f0r:A, 3f0r:B, 3f0r:C, 5fcw:A, 5fcw:B, 6hsk:A, 6hsk:B, 7jvu:A, 7jvu:B, 7jvv:A, 7jvv:B, 7jvw:A, 7jvw:B, 3mz3:A, 3mz3:B, 3mz4:A, 3mz4:B, 3mz6:A, 3mz7:A, 6oda:A, 6oda:B, 6oda:C, 6odb:A, 6odb:B, 6odb:C, 6odc:A, 6odc:B, 6odc:C, 4qa0:B, 4qa1:A, 4qa1:B, 4qa1:C, 4qa1:D, 4qa2:A, 4qa2:B, 4qa3:A, 4qa3:B, 4qa4:A, 4qa5:A, 4qa5:B, 4qa6:A, 4qa6:B, 4qa7:A, 4rn0:A, 4rn0:B, 4rn1:A, 4rn1:B, 4rn2:A, 4rn2:B, 3rqd:A, 3rqd:B, 1t64:A, 1t64:B, 1t67:A, 1t69:A, 5ths:A, 5ths:B, 5tht:A, 5tht:B, 5tht:C, 5tht:D, 5thu:A, 5thu:B, 5thv:A, 5thv:B, 2v5w:B, 2v5w:A, 2v5x:A, 2v5x:B, 5vi6:A, 1vkg:A, 1vkg:B, 1w22:A, 1w22:B

[Back]