Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
HHHLANTSAHDFSYLKFVYNATDTSLEGSYDYIVIGGGTSGCPLAATLSEKYKVLLLERGTIATEYPNTLTADGFAYNLQ
QQDDGKTPVERFVSEDGIDNVRARILGGTTIINAGVYARANISFYSQTGIEWDLDLVNKTYEWVEDAIVVKPNNQSWQSV
IGEGFLEAGILPDNGFSLDHEAGTRLTGSTFDNNGTRHAADELLNKGDPNNLLVAVQASVEKILFSNLSAIGVIYTDSDG
NSHQAFVRGNGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNITVVQPNPYVGQFVYDNPRNFINILPPNPIEASVVTVLG
IRSDYYQVSLSSLPFSTPPFSFFPTTSYPLPNSTFAHIVSQVPGPLSHGSVTLNSSSDVRIAPNIKFNYYSNSTDLANCV
SGMKKLGDLLRTKALEPYKARDVLGIDGFNYLGVPLPQTDDASFETFCLDNVASYWHYHGGSLVGKVLDDSFRVMGIKAL
RVVDASTFPYEPNSHPQGFYLMLGRYVGLQILQERS

The query sequence (length=516) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6jby:A 521 521 0.9961 0.9866 0.9866 0.0 7bwp:A, 7cgs:A, 5eb4:A, 5eb4:B, 5eb5:A, 5eb5:B, 8jm0:A, 8jm1:A, 8jm2:A, 8jm3:A, 8jm4:A, 8jm5:B, 8jm6:A, 8jm7:A, 8jm8:A, 6lqy:A, 6lr8:A
2 3red:A 521 519 0.7733 0.7658 0.7688 0.0 3red:B, 3red:C, 3red:D, 3red:E, 3red:F, 3red:G, 3red:H, 3red:I, 3red:J, 3red:K, 3red:L
3 3gdn:A 521 518 0.7694 0.7620 0.7664 0.0 3gdn:B, 3gdp:A, 3gdp:B, 1ju2:A, 1ju2:B
4 8bxl:B 590 604 0.2829 0.2475 0.2417 3.33e-24 8bxl:C, 8bxl:D, 8bxl:A, 8bxl:F, 8bxl:E
5 4h7u:A 577 566 0.2771 0.2478 0.2527 4.65e-22
6 4udq:A 525 538 0.2636 0.2590 0.2528 3.91e-21 6f97:A, 6f97:B, 4udp:A, 4udp:B, 4udq:B, 4udr:A, 4udr:B
7 5ncc:A 578 559 0.2733 0.2439 0.2522 4.63e-20 7av4:AAA, 5ncc:B, 5ncc:C, 5ncc:D, 5ncc:E, 5ncc:F, 7r33:A, 7r33:B, 7r34:A, 7r34:B, 7r35:A, 7r35:B, 7r36:A, 7r36:B, 6yru:AAA, 6yrv:AAA, 6yrx:AAA, 6yrz:AAA, 6ys1:AAA, 6ys2:AAA, 6zh7:A, 6zh7:B
8 8b7s:A 458 508 0.2500 0.2817 0.2539 6.29e-20
9 3fim:B 565 575 0.2752 0.2513 0.2470 1.95e-19 5oc1:A
10 3q9t:A 577 594 0.2810 0.2513 0.2441 5.55e-19 3q9t:B, 3q9t:C, 5zu2:A, 5zu2:B, 5zu2:C, 5zu3:A, 5zu3:B, 5zu3:C
11 4mjw:A 532 329 0.1667 0.1617 0.2614 2.40e-18 2jbv:A, 2jbv:B, 3ljp:A, 3ljp:B, 4mjw:B, 3nne:A, 3nne:B, 3nne:C, 3nne:D, 3nne:E, 3nne:F, 3nne:G, 3nne:H
12 6ze7:B 586 315 0.1589 0.1399 0.2603 1.84e-14 7aa2:A, 7aa2:B, 6ze2:A, 6ze2:B, 6ze3:A, 6ze4:A, 6ze4:B, 6ze5:A, 6ze5:B, 6ze6:A, 6ze6:B, 6ze7:A
13 6ze7:B 586 154 0.0659 0.0580 0.2208 7.3 7aa2:A, 7aa2:B, 6ze2:A, 6ze2:B, 6ze3:A, 6ze4:A, 6ze4:B, 6ze5:A, 6ze5:B, 6ze6:A, 6ze6:B, 6ze7:A
14 6h3o:F 650 310 0.1647 0.1308 0.2742 3.20e-13 6h3g:A, 6h3g:B, 6h3g:C, 6h3g:F, 6h3g:D, 6h3g:E, 6h3g:G, 6h3g:H, 6h3o:A, 6h3o:B, 6h3o:C, 6h3o:D, 6h3o:E, 6h3o:G, 6h3o:H, 8il5:A
15 6h3o:F 650 79 0.0446 0.0354 0.2911 0.029 6h3g:A, 6h3g:B, 6h3g:C, 6h3g:F, 6h3g:D, 6h3g:E, 6h3g:G, 6h3g:H, 6h3o:A, 6h3o:B, 6h3o:C, 6h3o:D, 6h3o:E, 6h3o:G, 6h3o:H, 8il5:A
16 4ynt:A 570 552 0.2733 0.2474 0.2554 3.74e-13 7vkd:A, 7vkf:A, 7vzp:A, 7vzp:B, 7vzs:A, 7vzs:B, 4ynu:A
17 3t37:A 509 506 0.2151 0.2181 0.2194 2.70e-11 4ha6:A
18 8il5:B 595 307 0.1647 0.1429 0.2769 6.86e-11
19 8il5:B 595 79 0.0446 0.0387 0.2911 0.027
20 6o9n:A 613 336 0.1570 0.1321 0.2411 5.19e-10 6o9n:B
21 6o9n:A 613 177 0.0930 0.0783 0.2712 0.001 6o9n:B
22 8il4:C 619 321 0.1667 0.1389 0.2679 1.16e-09 8il4:A, 8il4:B, 8il4:D
23 8il4:C 619 72 0.0388 0.0323 0.2778 0.30 8il4:A, 8il4:B, 8il4:D
24 6xut:A 589 332 0.1667 0.1460 0.2590 2.18e-09 6xuu:A, 6xuv:A
25 6xut:A 589 34 0.0310 0.0272 0.4706 0.061 6xuu:A, 6xuv:A
26 1gpe:B 587 306 0.1512 0.1329 0.2549 2.85e-09 1gpe:A
27 1gpe:B 587 158 0.0853 0.0750 0.2785 0.003 1gpe:A
28 8orh:A 649 123 0.0814 0.0647 0.3415 2.49e-08 8orh:B, 8ors:A, 8ors:B, 7yx3:A, 7yx3:B, 4z24:A, 4z24:B, 4z25:A, 4z25:B, 4z25:C, 4z25:D, 4z25:E, 4z25:F, 4z25:G, 4z25:H, 4z25:I, 4z25:J, 4z25:K, 4z25:L, 4z26:A, 4z26:B, 4z26:C, 4z26:D, 4z26:E, 4z26:F, 4z26:G, 4z26:H
29 7yx4:A 650 124 0.0833 0.0662 0.3468 3.74e-08 7ptv:A, 7ptv:B, 7yx4:B, 7yx5:A
30 7yx4:A 650 32 0.0271 0.0215 0.4375 4.9 7ptv:A, 7ptv:B, 7yx4:B, 7yx5:A
31 7yx4:A 650 48 0.0252 0.0200 0.2708 5.7 7ptv:A, 7ptv:B, 7yx4:B, 7yx5:A
32 1cf3:A 581 304 0.1415 0.1256 0.2401 4.20e-05 1gal:A, 8jpz:A, 8jpz:B, 5nit:A, 5niw:A, 3qvp:A, 3qvr:A
33 1cf3:A 581 51 0.0310 0.0275 0.3137 0.067 1gal:A, 8jpz:A, 8jpz:B, 5nit:A, 5niw:A, 3qvp:A, 3qvr:A
34 1kdg:B 546 298 0.1550 0.1465 0.2685 0.001 1kdg:A, 1naa:A, 1naa:B
35 1kdg:B 546 53 0.0329 0.0311 0.3208 0.18 1kdg:A, 1naa:A, 1naa:B
36 4qi7:A 805 289 0.1453 0.0932 0.2595 0.002 4qi7:B
37 4qi7:A 805 48 0.0329 0.0211 0.3542 0.032 4qi7:B
38 5kxj:A 481 52 0.0426 0.0457 0.4231 0.002
39 4qi6:A 800 71 0.0465 0.0300 0.3380 0.006 4qi3:A, 4qi3:B, 4qi4:A, 4qi5:A
40 4qi6:A 800 54 0.0368 0.0238 0.3519 0.76 4qi3:A, 4qi3:B, 4qi4:A, 4qi5:A
41 5hsa:A 662 313 0.1531 0.1193 0.2524 0.007 5hsa:B, 5hsa:C, 5hsa:D, 5hsa:E, 5hsa:F, 5hsa:G, 5hsa:H, 5i68:A
42 7dve:A 498 79 0.0504 0.0522 0.3291 0.040
43 7cyx:A 363 52 0.0388 0.0551 0.3846 0.26 7cyx:B
44 7d9f:A 591 60 0.0349 0.0305 0.3000 0.26 7d9f:B, 7d9g:A, 7d9g:B, 7d9h:A, 7d9h:B, 7d9i:A, 7d9i:B, 7d9j:A, 7d9j:B
45 7qfd:A 458 63 0.0426 0.0480 0.3492 0.36 7qva:A
46 7qf8:A 494 63 0.0426 0.0445 0.3492 0.38
47 3kpr:D 201 103 0.0504 0.1294 0.2524 0.45 5d2n:C, 5d2n:D, 3kpr:I, 4z7v:E, 4z7v:G
48 8wpe:A 1006 79 0.0388 0.0199 0.2532 0.89 8hg1:A, 8hpa:A, 8j86:A, 8j8f:A, 8j8g:A, 8k8s:A, 8k8u:A, 5n2g:A, 8wpf:A, 8wpk:A, 8wpp:A
49 3e1t:A 437 31 0.0310 0.0366 0.5161 1.1
50 4j9v:A 456 82 0.0465 0.0526 0.2927 1.3 4j9u:H, 4j9u:G, 4j9u:E, 4j9u:F, 4j9v:B, 6v4k:E, 6v4k:F, 6v4k:G, 6v4k:H, 6v4l:C, 6v4l:D
51 8t0q:C 517 40 0.0368 0.0368 0.4750 1.6 8t0q:D, 8t0v:D
52 3rug:E 198 93 0.0446 0.1162 0.2473 2.0 3rug:G
53 3b3r:A 503 30 0.0291 0.0298 0.5000 2.2 1b4v:A, 3b6d:A, 1b8s:A, 1cbo:A, 1cc2:A, 3cnj:A, 2gew:A, 3gyi:A, 3gyj:A, 1ijh:A, 5kwf:A, 1mxt:A, 1n1p:A, 1n4u:A, 1n4v:A, 1n4w:A, 4rek:A, 4u2l:A, 4u2s:A, 4u2t:A, 4xwr:A, 4xxg:A
54 5mh4:A 303 42 0.0329 0.0561 0.4048 3.1 5mip:A, 5miq:A, 5mir:A, 5mis:A, 5mit:A, 5mjk:A, 5mjk:B, 5mjk:C, 5mjk:D
55 4x9m:A 384 32 0.0271 0.0365 0.4375 3.2 4x9n:A
56 1o5w:C 512 30 0.0329 0.0332 0.5667 3.9 1o5w:A, 1o5w:B, 1o5w:D
57 3ng7:X 427 32 0.0349 0.0422 0.5625 4.0 3k7m:X, 3k7q:X, 3k7t:A, 3k7t:B, 3ngc:X, 3nh3:X, 3nho:X, 3nk0:X, 3nk1:X, 3nk2:X, 3nn0:X, 3nn6:X
58 8wbu:A 391 94 0.0484 0.0639 0.2660 4.1 7d5g:A, 8wbv:A
59 6vmx:D 203 115 0.0581 0.1478 0.2609 4.2 6cql:D, 6cqn:D, 6cqq:D, 6cqq:I, 6cqr:D, 6cqr:I, 5d2l:I, 5d2l:K, 5d2l:O, 5d2l:E, 3gsn:A, 5isz:D, 6vmx:I
60 1ijt:A 128 93 0.0446 0.1797 0.2473 4.6
61 5k0a:D 322 39 0.0310 0.0497 0.4103 6.8 5jri:A, 5jri:B, 5k0a:A, 5k0a:B, 5k0a:C
62 7n4k:D 199 81 0.0407 0.1055 0.2593 7.0 6l9l:C, 6l9l:G, 7n5c:D, 7n5p:D, 3pqy:D, 3pqy:I, 3pqy:N, 3pqy:S
63 4qrr:D 203 107 0.0562 0.1429 0.2710 7.3 6bj3:D, 6bj8:D, 4wo4:C, 5xot:D
64 5w1v:I 202 94 0.0465 0.1188 0.2553 9.6 5e6i:F, 5e6i:P, 5w1v:D, 5w1v:N, 5w1v:S, 5w1w:D, 5w1w:I, 5w1w:N, 5w1w:S
65 7fje:m 246 87 0.0368 0.0772 0.2184 9.6 5c07:D, 5c07:I, 5c08:D, 5c08:I, 5c09:D, 5c09:I, 5c0a:D, 5c0a:I, 5c0b:D, 5c0b:I, 5c0c:I, 5c0c:D, 5hyj:D, 5hyj:I, 6u07:A, 3uts:D, 3uts:I, 3utt:D, 3utt:I, 6vqo:D, 6vqo:H
66 5hy5:A 511 36 0.0291 0.0294 0.4167 9.9 5hy5:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218