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BioLiP
>protein
HGYVSSPKSRVIQCKENGIENPTHPACIAAKAAGNGGLYTPQEVAVGGVRDNHDYYIPDGRLCSANRANLFGMDLARNDW
PATSVTPGAREFVWTNTAAHKTKYFRYYITPQGYDHSQPLRWSDLQLIHDSGPADQEWVSTHNVILPYRTGRHIIYSIWQ
RDWDRDAAEGFYQCIDVDFG

The query sequence (length=180) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5fjq:A 180 180 1.0000 1.0000 1.0000 6.82e-137 5fjq:B, 5fjq:C
2 7zjb:B 181 185 0.4389 0.4365 0.4270 5.47e-41
3 6if7:A 183 186 0.4167 0.4098 0.4032 4.33e-35
4 5opf:A 194 198 0.3778 0.3505 0.3434 2.11e-22
5 6twe:A 172 188 0.3556 0.3721 0.3404 2.51e-19
6 4oy7:A 196 197 0.3778 0.3469 0.3452 4.91e-19 4oy7:B, 4oy7:C, 4oy7:D, 4oy7:E, 4oy7:F, 4oy7:G, 4oy7:H
7 8rry:A 170 189 0.3389 0.3588 0.3228 1.15e-18 8rry:B
8 5wsz:A 169 185 0.3278 0.3491 0.3189 2.03e-17 5wsz:B, 5wsz:C, 5wsz:D
9 5iju:A 178 188 0.3389 0.3427 0.3245 1.35e-16 5iju:B, 2yox:A, 2yox:B, 2yoy:A, 2yoy:B
10 7okr:AAA 192 193 0.2944 0.2760 0.2746 1.09e-15
11 4oy6:A 186 194 0.3167 0.3065 0.2938 2.69e-15 4oy8:A
12 5uiz:A 186 193 0.3167 0.3065 0.2953 6.32e-15
13 5ftz:A 172 189 0.3167 0.3314 0.3016 1.20e-12
14 6rw7:A 208 210 0.3278 0.2837 0.2810 7.94e-12
15 4alc:A 166 189 0.3000 0.3253 0.2857 1.09e-11 4ale:A, 4alq:A, 4alr:A, 4als:A, 4alt:A
16 6t5z:A 174 184 0.3000 0.3103 0.2935 2.66e-11 6t5z:B, 6t5z:C
17 8gul:A 464 185 0.3000 0.1164 0.2919 4.91e-11
18 8gul:B 361 185 0.3000 0.1496 0.2919 4.94e-11
19 8cc3:A 180 192 0.3333 0.3333 0.3125 9.68e-11 8cc3:B, 8cc5:A, 8cc5:B, 7pb6:A, 7pb6:B, 7pb7:A, 7pb7:B
20 5l2v:A 166 182 0.2667 0.2892 0.2637 7.09e-10 5l2v:B
21 4yn2:A 281 100 0.1667 0.1068 0.3000 3.98e-06
22 4x27:A 307 128 0.2000 0.1173 0.2812 1.16e-04 4x29:A
23 5aa7:A 142 180 0.2278 0.2887 0.2278 0.010 5aa7:B, 5vg0:A, 5vg0:B, 5vg1:A, 5vg1:B
24 2e1z:A 394 94 0.1500 0.0685 0.2872 0.46 2e20:A, 4fwk:A, 4fwm:A, 4fwn:A, 4fwo:A, 4fwp:A, 4fwq:A, 4fwr:A, 4fws:A, 1x3m:A, 1x3n:A, 4xh1:A, 4xh4:A, 4xh5:A
25 8iew:A 498 40 0.0611 0.0221 0.2750 1.4 8inb:A
26 1jt2:A 255 67 0.1056 0.0745 0.2836 1.6
27 1xdn:A 265 56 0.1000 0.0679 0.3214 1.8
28 8tqm:A 843 43 0.1111 0.0237 0.4651 3.0
29 4tuf:A 346 38 0.0722 0.0376 0.3421 3.6 4tuf:B, 4tuf:C, 4tuf:D
30 6apl:C 306 55 0.0944 0.0556 0.3091 4.8 6apl:A, 6apl:B, 6apl:D, 6apl:E, 6apl:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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