BioLiP

>protein
HGYVSAVENGVAEGRVTLCKFAANGTGEKNTHCGAIQYEPQSVEGPDGFPVTGPRDGKIASAESALAAALDEQTADRWVK
RPIQAGPQTFEWTFTANHVTKDWKYYITKPNWNPNQPLSRDAFDLNPFCVVEGNMVQPPKRVSHECIVPEREGYQVILAV
WDVGDTAASFYNVIDVKFDG

The query sequence (length=180) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8cc3:A	180	180	1.0000	1.0000	1.0000	1.00e-135	8cc3:B, 8cc5:A, 8cc5:B, 7pb6:A, 7pb6:B, 7pb7:A, 7pb7:B
2	8gul:B	361	180	0.8444	0.4211	0.8444	1.68e-114
3	8gul:A	464	180	0.8444	0.3276	0.8444	1.89e-112
4	8rry:A	170	179	0.4778	0.5059	0.4804	3.77e-57	8rry:B
5	5wsz:A	169	179	0.5000	0.5325	0.5028	6.73e-53	5wsz:B, 5wsz:C, 5wsz:D
6	6t5z:A	174	177	0.4444	0.4598	0.4520	2.96e-50	6t5z:B, 6t5z:C
7	5iju:A	178	149	0.4278	0.4326	0.5168	4.17e-48	5iju:B, 2yox:A, 2yox:B, 2yoy:A, 2yoy:B
8	6twe:A	172	165	0.4222	0.4419	0.4606	8.83e-47
9	5l2v:A	166	179	0.4278	0.4639	0.4302	8.68e-45	5l2v:B
10	5ftz:A	172	151	0.4111	0.4302	0.4901	3.27e-42
11	4alc:A	166	179	0.4167	0.4518	0.4190	4.24e-38	4ale:A, 4alq:A, 4alr:A, 4als:A, 4alt:A
12	7zjb:B	181	123	0.2167	0.2155	0.3171	2.75e-14
13	5fjq:A	180	192	0.3333	0.3333	0.3125	2.63e-13	5fjq:B, 5fjq:C
14	5aa7:A	142	176	0.2833	0.3592	0.2898	4.63e-11	5aa7:B, 5vg0:A, 5vg0:B, 5vg1:A, 5vg1:B
15	6rw7:A	208	124	0.2111	0.1827	0.3065	1.22e-06
16	6if7:A	183	129	0.1889	0.1858	0.2636	2.41e-06
17	7okr:AAA	192	130	0.2000	0.1875	0.2769	6.76e-04
18	4oy7:A	196	83	0.1333	0.1224	0.2892	7.53e-04	4oy7:B, 4oy7:C, 4oy7:D, 4oy7:E, 4oy7:F, 4oy7:G, 4oy7:H
19	5uiz:A	186	84	0.1222	0.1183	0.2619	0.004
20	7aat:A	401	78	0.1333	0.0599	0.3077	0.035	7aat:B, 8aat:A, 8aat:B, 9aat:A, 9aat:B, 1aka:A, 1aka:B, 1akb:A, 1akc:A, 1ama:A, 1ivr:A, 1map:A, 1maq:A, 1oxo:A, 1oxo:B, 1oxp:A, 1tar:A, 1tar:B, 1tas:A, 1tas:B, 1tat:A, 1tat:B
21	7rh5:c	158	86	0.1556	0.1772	0.3256	0.095	6adq:K, 6adq:W, 8ovc:W, 8ovc:b, 8ovd:b, 8ovd:W, 7rh5:W, 7rh6:c, 7rh7:W, 7rh7:c
22	5uzx:A	231	59	0.0889	0.0693	0.2712	0.10	5uzx:B
23	1ug9:A	1019	58	0.1167	0.0206	0.3621	0.20	1ulv:A
24	7r27:B	398	64	0.1333	0.0603	0.3750	0.51	7r27:A
25	4yn2:A	281	106	0.1444	0.0925	0.2453	0.65
26	8urb:A	921	46	0.0889	0.0174	0.3478	1.2	8g6r:A
27	2f02:A	319	36	0.0667	0.0376	0.3333	1.6	2f02:B
28	3o3m:C	401	29	0.0722	0.0324	0.4483	4.3	3o3m:A, 3o3n:A, 3o3n:C, 3o3o:A
29	5v1b:A	226	40	0.0722	0.0575	0.3250	4.7
30	8skr:A	402	78	0.1167	0.0522	0.2692	6.1	3pd6:A, 3pd6:B, 3pd6:C, 3pdb:B, 3pdb:D, 8skr:C
31	6h7f:A	671	109	0.1389	0.0373	0.2294	6.5	6h7f:B, 6h7f:C, 6h7v:B, 6hcp:A, 6hcp:B, 6hcp:C
32	1u63:A	214	36	0.0667	0.0561	0.3333	8.1	1i2a:A, 1u63:C
33	5k1r:B	440	89	0.1333	0.0545	0.2697	8.7	5k1r:A
34	5eke:C	307	47	0.0889	0.0521	0.3404	8.8	5eke:A, 5eke:B, 5eke:D, 5ekp:C, 5ekp:A, 5ekp:B, 5ekp:D

[Back]