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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
HGPDPENILPIKGNRNLQFIKPTITNENILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGAN
HRMDGSTYPFHLFRMGWEKYMPSLKDLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIVGGNPL
KFIRKRFSDGVIEEWLALQWWNLDMKIINENLPFIINGDIEMLKRKR

The query sequence (length=207) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4hus:A 212 207 1.0000 0.9764 1.0000 2.55e-153 4hur:A, 4hur:B, 4hur:C, 4hus:C, 6x3c:A, 6x3c:F, 6x3c:B, 6x3c:C, 6x3c:D, 6x3c:E, 6x3j:A, 6x3j:B, 6x3j:D, 6x3j:C, 6x3j:E, 6x3j:F
2 1khr:A 206 200 0.5990 0.6019 0.6200 3.28e-90 3dho:A, 3dho:C, 3dho:B, 3dho:D, 3dho:F, 3dho:E, 1khr:B, 1khr:C, 1khr:D, 1khr:E, 1khr:F, 1kk4:A, 1kk4:B, 1kk4:C, 1kk4:D, 1kk4:E, 1kk4:F, 1mr9:A, 1mr9:C, 1mr9:B, 1mr9:X, 1mr9:Z, 1mr9:Y, 1mrl:A, 1mrl:B, 1mrl:C
3 6pub:A 210 189 0.4300 0.4238 0.4709 5.32e-45 6u9c:A, 6u9c:B, 6u9c:C
4 2xat:A 208 148 0.3382 0.3365 0.4730 6.77e-40
5 8j40:A 209 146 0.3430 0.3397 0.4863 1.69e-39
6 6pxa:E 221 208 0.4058 0.3801 0.4038 9.63e-38 6pxa:A, 6pxa:B, 6pxa:C, 6pxa:D, 6pxa:F, 6pxa:G, 6pxa:H, 6pxa:I, 6pxa:J, 6pxa:K, 6pxa:L, 5ux9:A, 5ux9:B, 5ux9:C, 5ux9:D
7 7uuk:C 276 156 0.2609 0.1957 0.3462 3.35e-15 7jm1:A, 7jm1:C, 7jm1:B, 7jm2:A, 7jm2:C, 7jm2:B, 7uuj:A, 7uuj:C, 7uuj:B, 7uuk:A, 7uuk:B, 7uul:A, 7uul:B, 7uul:D, 7uul:C, 7uul:F, 7uul:E, 7uum:A, 7uun:A, 7uuo:B
8 5u2k:A 190 113 0.2029 0.2211 0.3717 6.47e-15 5v0z:A, 5v0z:C, 5v0z:B, 3v4e:A, 3v4e:C, 3v4e:B
9 3igj:C 188 104 0.1932 0.2128 0.3846 5.19e-12 3igj:A, 3igj:B
10 3nz2:J 185 109 0.1836 0.2054 0.3486 1.29e-10 3ect:A, 3nz2:A, 3nz2:C, 3nz2:B, 3nz2:D, 3nz2:E, 3nz2:F, 3nz2:G, 3nz2:H, 3nz2:I, 3nz2:K, 3nz2:L
11 4isx:A 186 53 0.1208 0.1344 0.4717 2.62e-10 4isx:B
12 1kru:A 201 53 0.1256 0.1294 0.4906 2.99e-10 1kqa:A, 1kqa:B, 1kqa:C, 1krr:A, 1krr:B, 1krr:C, 1kru:B, 1kru:C, 1krv:A, 1krv:C, 1krv:B
13 7txp:A 209 65 0.1063 0.1053 0.3385 2.27e-06 7txq:A, 7txs:A
14 2wle:C 211 57 0.0966 0.0948 0.3509 2.47e-06 2wle:A, 2wle:B, 2wlf:A, 2wlf:C, 2wlf:B, 2wlg:A, 2wlg:C, 2wlg:B
15 4mzu:F 294 39 0.1014 0.0714 0.5385 3.44e-05 4mzu:A, 4mzu:C, 4mzu:E, 4mzu:B, 4mzu:D, 4mzu:G, 4mzu:I, 4mzu:K, 4mzu:H, 4mzu:J, 4mzu:L, 4zu4:A, 4zu4:B, 4zu4:C
16 4mzu:F 294 36 0.0821 0.0578 0.4722 2.3 4mzu:A, 4mzu:C, 4mzu:E, 4mzu:B, 4mzu:D, 4mzu:G, 4mzu:I, 4mzu:K, 4mzu:H, 4mzu:J, 4mzu:L, 4zu4:A, 4zu4:B, 4zu4:C
17 4n69:A 243 50 0.0966 0.0823 0.4000 2.40e-04 4n69:B, 4n6b:A, 4n6b:E, 4n6b:B, 4n6b:C, 4n6b:D, 4n6b:F
18 7s3u:A 145 32 0.0821 0.1172 0.5312 4.50e-04 7s3w:A, 7s41:A, 7s42:A, 7s43:A, 7s44:A, 7s45:A
19 7s3u:A 145 36 0.0821 0.1172 0.4722 4.2 7s3w:A, 7s41:A, 7s42:A, 7s43:A, 7s44:A, 7s45:A
20 3i3a:A 259 117 0.1643 0.1313 0.2906 4.83e-04 3i3a:B, 3i3a:C, 3i3x:A, 3i3x:B, 3i3x:C
21 2fko:A 173 64 0.1304 0.1561 0.4219 5.08e-04 1v3w:A, 1v67:A
22 8vr7:E 180 54 0.0918 0.1056 0.3519 8.81e-04 8vr6:A, 8vr7:A, 8vr7:B, 8vr7:C, 8vr7:D, 8vr7:F
23 2oi6:B 452 41 0.0821 0.0376 0.4146 0.003 4aa7:A, 4aa7:B, 1fwy:A, 1fwy:B, 1hv9:A, 1hv9:B, 2oi5:A, 2oi5:B, 2oi6:A, 2oi7:A, 2oi7:B, 3twd:A, 3twd:B
24 2oi6:B 452 45 0.0773 0.0354 0.3556 8.6 4aa7:A, 4aa7:B, 1fwy:A, 1fwy:B, 1hv9:A, 1hv9:B, 2oi5:A, 2oi5:B, 2oi6:A, 2oi7:A, 2oi7:B, 3twd:A, 3twd:B
25 7aqq:y 268 96 0.1256 0.0970 0.2708 0.003 7ar7:y, 7ar8:y, 7arb:y, 8bef:y, 8bpx:y, 8bq5:y, 8bq6:y
26 3fsb:A 260 43 0.0821 0.0654 0.3953 0.011 3fs8:A, 3fs8:B, 3fsb:B, 3fsc:A, 3fsc:B
27 6wye:A 261 54 0.0918 0.0728 0.3519 0.014 7ra4:A, 7ra4:C, 7ra4:B, 6wye:C, 6wye:B, 6wye:D, 6wye:F, 6wye:E
28 4fce:A 441 41 0.0773 0.0363 0.3902 0.017
29 7l7y:AAA 217 69 0.1111 0.1060 0.3333 0.023 7l7z:AAA, 7l81:AAA, 7l82:AAA
30 4e1k:A 450 41 0.0725 0.0333 0.3659 0.025 4knr:A, 4knx:A, 4kpx:A, 4kpz:A, 4kql:A, 2v0i:A, 2v0j:A, 2v0k:A, 2v0l:A, 2vd4:A, 2w0v:A, 2w0w:A
31 4e1k:A 450 96 0.1449 0.0667 0.3125 7.3 4knr:A, 4knx:A, 4kpx:A, 4kpz:A, 4kql:A, 2v0i:A, 2v0j:A, 2v0k:A, 2v0l:A, 2vd4:A, 2w0v:A, 2w0w:A
32 3r8y:A 203 111 0.1643 0.1675 0.3063 0.033 3r8y:C, 3r8y:D, 3r8y:F
33 2iu8:A 346 53 0.0918 0.0549 0.3585 0.033 2iu8:B, 2iu8:C, 2iu9:A, 2iu9:B, 2iu9:C, 2iua:A, 2iua:C
34 7aqq:z 233 51 0.0821 0.0730 0.3333 0.062 7a23:q, 7a23:p, 7a24:q, 7a24:p, 7ar7:z, 7ar8:z, 7arb:z, 8bef:z, 8bpx:z, 8bq5:z, 8bq6:z
35 1hm8:A 458 54 0.0725 0.0328 0.2778 0.078 4aaw:A, 4ac3:A, 1g97:A, 1hm8:B, 1hm9:A, 1hm9:B, 7kr9:A
36 4wer:A 285 66 0.0870 0.0632 0.2727 0.15
37 8e73:G2 258 53 0.0773 0.0620 0.3019 0.19 6x89:G2
38 2ggq:A 401 35 0.0918 0.0474 0.5429 0.22 5z09:A, 5z09:B, 5z09:C, 5z09:D
39 3foq:A 439 165 0.2029 0.0957 0.2545 0.27
40 6jlz:I 430 148 0.1739 0.0837 0.2432 0.31
41 3bss:A 194 51 0.0628 0.0670 0.2549 0.32 3bsy:A, 3bsy:C, 3bsy:B, 5t2y:A, 5t2y:B, 5tyh:A, 2vhe:A, 2vhe:B
42 4eqy:G 260 108 0.1256 0.1000 0.2407 0.32
43 4ihh:E 340 35 0.0773 0.0471 0.4571 0.39 4ihf:D, 4ihf:E, 4ihf:F, 4ihf:A, 4ihf:B, 4ihf:C, 4ihg:E, 4ihg:C, 4ihg:B, 4ihg:D, 4ihh:A, 4ihh:C, 4ihh:B, 4ihh:D, 4ihh:F, 6p83:A, 6p83:C, 6p83:B, 6p84:A, 6p84:C, 6p84:B, 6p85:A, 6p85:C, 6p85:B, 6p86:A, 6p86:C, 6p86:B, 6p87:A, 6p87:C, 6p87:B, 6p88:A, 6p88:C, 6p88:B, 6p89:A, 6p89:C, 6p89:B, 6p8a:A, 6p8a:C, 6p8a:B, 6p8b:A, 6p8b:C, 6p8b:B
44 4ihh:E 340 115 0.1449 0.0882 0.2609 2.4 4ihf:D, 4ihf:E, 4ihf:F, 4ihf:A, 4ihf:B, 4ihf:C, 4ihg:E, 4ihg:C, 4ihg:B, 4ihg:D, 4ihh:A, 4ihh:C, 4ihh:B, 4ihh:D, 4ihh:F, 6p83:A, 6p83:C, 6p83:B, 6p84:A, 6p84:C, 6p84:B, 6p85:A, 6p85:C, 6p85:B, 6p86:A, 6p86:C, 6p86:B, 6p87:A, 6p87:C, 6p87:B, 6p88:A, 6p88:C, 6p88:B, 6p89:A, 6p89:C, 6p89:B, 6p8a:A, 6p8a:C, 6p8a:B, 6p8b:A, 6p8b:C, 6p8b:B
45 4eaa:A 210 54 0.0773 0.0762 0.2963 0.49 4ea7:A, 4ea8:A, 4ea9:A, 4eab:A
46 3vbm:E 193 56 0.0821 0.0881 0.3036 0.84 3vbi:A, 3vbi:E, 3vbi:C, 3vbj:A, 3vbj:C, 3vbj:E, 3vbk:A, 3vbk:E, 3vbk:C, 3vbl:A, 3vbl:C, 3vbl:E, 3vbm:A, 3vbm:C, 3vbn:A, 3vbn:E, 3vbn:C, 3vbp:A, 3vbp:E, 3vbp:C
47 8e62:C 183 80 0.1256 0.1421 0.3250 0.90 8e62:A, 8e62:B, 8e62:D, 8e62:E, 8e62:F
48 6alw:A 288 47 0.0918 0.0660 0.4043 0.97 6alw:B, 6b9i:A, 6b9i:B
49 3d8v:A 478 177 0.2126 0.0921 0.2486 1.1 3dj4:A, 4g3p:A, 4g3q:A, 4g3s:A, 4g87:A, 6ge9:A, 4hcq:A, 4k6r:A, 2qkx:A, 3spt:A, 3st8:A
50 3vnp:A 171 58 0.0870 0.1053 0.3103 1.4 3vnp:B, 3vnp:C
51 6epz:C 673 89 0.1256 0.0386 0.2921 2.6 6epy:A, 6epy:B, 6epy:C, 6epy:D, 6epz:A, 6epz:D, 6epz:B, 6eq0:A, 6eq0:B, 6eq1:A, 6eq1:B, 6eq8:D, 6eq8:B, 6eq8:C, 6eq8:A
52 4r37:A 255 73 0.0918 0.0745 0.2603 4.8
53 4m99:A 206 53 0.0773 0.0777 0.3019 8.1 4m99:B, 4m99:C
54 7bur:B 389 40 0.0676 0.0360 0.3500 8.3 7bur:A, 8jrd:A, 8jrd:B
55 4dl9:A 379 93 0.1256 0.0686 0.2796 8.4 4dl9:B, 4dla:A, 4dla:B, 4dlb:A, 4dlb:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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