BioLiP

>protein
HFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAIS
PGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDNIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTE
YCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKG
RSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKYSPQMALKLALTEWLQEFGVPHQYSVTLEDLQLLADLFYLPYEHG
PKGAQMLREFQWLRANSIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCWAF
RGGLAGEFQRLLPIDGAND

The query sequence (length=419) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5m7t:A	451	451	0.9785	0.9091	0.9091	0.0	5m7s:A, 5m7s:B, 5m7t:B, 5m7u:A, 5m7u:B, 7ou6:AAA, 7ou6:BBB, 6pm9:A, 6pm9:B, 6pm9:C, 6pm9:D, 5uhl:A, 5uhl:C, 5uho:A, 5uho:C
2	5vvx:C	431	437	0.9714	0.9443	0.9314	0.0	5un8:A, 5un8:C, 5un8:B, 5un8:D, 5un9:A, 5un9:B, 5vvt:A, 5vvt:C, 5vvu:A, 5vvu:C, 5vvv:A, 5vvv:C
3	7yeh:C	344	299	0.7088	0.8634	0.9933	0.0
4	7khs:A	449	406	0.3413	0.3185	0.3522	1.43e-88	7khs:B, 7khs:D, 2xsb:A
5	7khs:C	427	406	0.3246	0.3185	0.3350	2.90e-77
6	5diy:A	463	298	0.2554	0.2311	0.3591	5.38e-55	5diy:B
7	7ou8:AAA	714	275	0.2411	0.1415	0.3673	9.74e-47	5abe:A, 5abe:B, 5abf:A, 5abf:B, 5abg:A, 5abg:B, 5abh:A, 5abh:B, 4ais:A, 4ais:B, 4aiu:A, 2chn:A, 2chn:B, 2cho:A, 2cho:B, 5fky:A, 5fky:B, 5fl0:A, 5fl0:B, 5fl1:A, 5fl1:B, 2j47:A, 2j4g:A, 2j4g:B, 2jiw:A, 2jiw:B, 7k41:A, 5mi4:A, 5mi5:A, 5mi6:A, 5mi7:A, 7ou8:BBB, 4ur9:A, 4ur9:B, 2vvn:A, 2vvn:B, 2vvs:A, 2w4x:A, 2w66:A, 2w66:B, 2w67:A, 2w67:B, 2wca:A, 2wzh:A, 2wzi:A, 2wzi:B, 2x0h:A, 2x0h:B, 2xj7:A, 2xj7:B, 2xm1:A, 2xm1:B, 2xm2:A, 2xm2:B
8	2v5d:A	722	272	0.2172	0.1260	0.3346	6.27e-42	2cbi:A, 2cbi:B, 2cbj:A, 2cbj:B, 2j1a:A, 2j1e:A, 2j62:A, 2j62:B, 2j7m:A, 7khv:A, 7khv:B, 7khv:C, 7khv:D, 7khv:E, 7khv:F, 5oxd:A, 6rhe:A, 2v5c:A, 2v5c:B, 2vur:A, 2vur:B, 2wb5:A, 2wb5:B, 2x0y:A, 2x0y:B, 2xpk:A, 2xpk:B, 2ydq:A, 2ydr:A, 2yds:A, 4zxl:A
9	6pv4:C	608	293	0.1790	0.1234	0.2560	3.14e-22	6pv4:A, 6pv4:B, 6pv4:D
10	2a0i:A	293	165	0.1026	0.1468	0.2606	0.18
11	3rf7:A	362	40	0.0286	0.0331	0.3000	0.76
12	4ged:A	268	59	0.0477	0.0746	0.3390	1.2	5al9:A, 5ala:A, 5ala:B, 5amm:A, 5amm:B, 3riv:A, 3riv:B, 3riw:A, 3riw:B
13	5l22:B	540	65	0.0453	0.0352	0.2923	1.3	5l22:A
14	7f4v:aF	151	57	0.0406	0.1126	0.2982	1.9	7f4v:bF, 7f4v:cF
15	8dmu:A	476	87	0.0644	0.0567	0.3103	2.7	8dmu:B, 8dmu:C, 8dmu:D
16	2wyw:A	259	83	0.0549	0.0888	0.2771	4.7	2wyv:B, 2wyv:D, 2wyw:B, 2wyw:C, 2wyw:D, 2yw9:D, 2yw9:H
17	7x2u:A	541	39	0.0310	0.0240	0.3333	6.1	7x2u:B
18	7kaw:C	593	34	0.0286	0.0202	0.3529	8.7	7kaw:B, 7kaz:C, 7kaz:B
19	1kq3:A	364	39	0.0310	0.0357	0.3333	9.4
20	6ji2:A	432	67	0.0406	0.0394	0.2537	9.7	4cxg:A, 4cxh:A, 6ji2:E, 3vmf:A, 3wxm:A, 3wxm:C, 3wxm:E, 3wxm:G

[Back]