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BioLiP
>protein
HAVVTVPTPRGAGPYYTQRCGETYAVYMEKDKAGPIENGVAKAGSELGCNPFLCRGYQYEDNEAVEYEPGQVIDFHVDLI
AGHHPGYANVSIVDLEANKIIGDPLRSWDDYPNRSDIDFNVTIPNTLGTACSTGGKCAIQWYWYASGNKQSYESCVDFYV
KA

The query sequence (length=162) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7ze9:CCC 168 168 1.0000 0.9643 0.9643 3.92e-119 7ze9:AAA, 7ze9:BBB
2 4v3b:A 388 41 0.0617 0.0258 0.2439 3.9 4v3c:A
3 8t3k:C 541 30 0.0926 0.0277 0.5000 4.7
4 7yca:B 732 111 0.1667 0.0369 0.2432 6.1
5 1jv1:A 490 28 0.0741 0.0245 0.4286 8.8 1jv1:B, 1jv3:A, 1jv3:B, 1jvd:A, 1jvd:B, 1jvg:A, 1jvg:B, 6z2f:A, 6z2f:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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