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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GYVGFANLPKQWHRRSIKNGFSFNLLCVGPDGIGKTTLMKTLFNNDDIEANLVKEQRHKVKIKSYESVIEENGVKLNLNV
IDTEGFGDFLNNDQKSWDPIIKEIDSRFDQYLDAENKINRHSINDKRIHACLYFIEPTGHYLKPLDLKFMQSVYEKCNLI
PVIAKSDILTDEEILSFKKTIMNQLIQSNIELFKPPIYSNDDAENSHLSERLFSSLPYAVIGSNDIVENYSGNQVRGRSY
PWGVIEVDNDNHSDFNLLKNLLIKQFMEELKERTSKILYENYRSSKL

The query sequence (length=287) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8pfh:B 287 287 1.0000 1.0000 1.0000 0.0 8fwp:B, 8sgd:B, 8sgd:D
2 9bht:C 282 286 0.4634 0.4716 0.4650 3.26e-91 9bht:D, 9bhw:A, 9bhw:D
3 7m6j:D 273 291 0.4599 0.4835 0.4536 1.17e-88 7m6j:C, 6n0b:C, 6n0b:A, 6n0b:B, 6n0b:D, 6n12:A, 6n12:B, 3t5d:A, 3t5d:C, 6uqq:A, 6uqq:B
4 9bht:E 288 293 0.4321 0.4306 0.4232 8.35e-78 9bht:B
5 7m6j:E 296 290 0.4251 0.4122 0.4207 5.00e-76 7m6j:B, 6upa:B
6 6upr:B 270 271 0.4111 0.4370 0.4354 4.04e-72
7 9bhw:B 299 294 0.4181 0.4013 0.4082 5.78e-72 9bhw:C
8 8dkt:A 264 271 0.3972 0.4318 0.4207 6.22e-72
9 6upq:A 270 272 0.4042 0.4296 0.4265 2.50e-71 3ftq:A, 7m6j:F, 6upr:A
10 3ftq:B 252 269 0.4111 0.4683 0.4387 8.54e-70 3ftq:C, 3ftq:D, 2qnr:B, 6upa:A
11 6uqq:C 280 273 0.4077 0.4179 0.4286 1.47e-69 3sop:A, 3sop:B, 6uqq:D, 4z51:A, 4z54:A, 4z54:B
12 6upq:B 247 266 0.3972 0.4615 0.4286 2.28e-69
13 8pfh:C 289 286 0.3868 0.3841 0.3881 3.15e-68
14 6mq9:B 267 269 0.3902 0.4195 0.4164 6.47e-68 6mq9:A, 6mq9:D, 6mq9:C, 6mqb:A, 6mqk:A, 6mqk:D, 6mqk:B, 6mqk:C, 6mql:A
15 4kva:B 258 270 0.3868 0.4302 0.4111 4.84e-65 4kv9:A, 4kv9:B, 4kva:A
16 5cyo:A 272 272 0.3937 0.4154 0.4154 9.19e-65 5cyo:B, 4yqf:B, 4yqf:A
17 8dkt:B 262 270 0.3624 0.3969 0.3852 9.08e-62
18 5cyp:A 248 271 0.3798 0.4395 0.4022 1.35e-61 5cyp:B, 5cyp:C
19 8sgd:A 291 296 0.4042 0.3986 0.3919 5.94e-60 8fwp:A, 8pfh:A, 8sgd:C
20 2qa5:B 234 286 0.4077 0.5000 0.4091 1.30e-59 2qa5:A, 2qag:A, 2qnr:A
21 3tw4:A 218 267 0.3519 0.4633 0.3783 1.93e-56 3tw4:B
22 7m6j:A 234 268 0.3624 0.4444 0.3881 4.89e-56
23 2qag:C 224 282 0.3798 0.4866 0.3865 1.47e-55
24 9bht:A 220 267 0.3415 0.4455 0.3670 6.83e-55 9bht:F
25 5cyp:D 227 271 0.3484 0.4405 0.3690 3.18e-51
26 2qag:B 246 279 0.3519 0.4106 0.3620 9.81e-50
27 8pfh:D 291 298 0.3380 0.3333 0.3255 9.75e-43
28 5irr:B 281 302 0.2892 0.2954 0.2748 1.13e-29 5irr:A
29 7dnz:A 591 70 0.0662 0.0321 0.2714 0.020 7dny:A, 7dny:B, 7dnz:B, 7ekl:A, 7ekl:B, 8k7b:A, 8k7b:B, 8k7c:A, 8k7c:B, 3nh9:A, 3nha:A, 3nhb:A, 8yr3:A, 8yr3:B, 8yr4:B, 8yr4:A
30 3pvs:D 424 37 0.0488 0.0330 0.3784 0.56 3pvs:A, 3pvs:B
31 7msm:x 553 54 0.0627 0.0325 0.3333 0.59 7msc:x, 7msh:x, 7msz:x, 7mu0:A, 7mu0:B
32 6mfu:A 216 21 0.0418 0.0556 0.5714 0.95 6mfu:B, 6mfu:C, 6mfu:D
33 7pr1:A 587 48 0.0557 0.0273 0.3333 1.2 7pr1:B, 7pru:A, 7pru:B
34 1gjw:A 636 51 0.0662 0.0299 0.3725 1.2
35 2il1:A 163 65 0.0662 0.1166 0.2923 1.5
36 4i81:E 290 38 0.0523 0.0517 0.3947 2.0 4i81:D
37 5oql:Z 639 18 0.0383 0.0172 0.6111 2.0
38 6rxt:CI 822 18 0.0383 0.0134 0.6111 2.0 6rxu:CI, 6rxv:CI, 6rxx:CI, 6rxy:CI, 6rxz:CI
39 8b1t:B 1141 30 0.0418 0.0105 0.4000 2.2 8b1u:B, 7mr3:B, 6sjb:B, 6sje:B, 6sjf:B, 6sjg:B, 6t2u:B, 6t2v:B
40 8b1r:B 1170 30 0.0418 0.0103 0.4000 2.2 3k70:B, 3k70:E, 5ld2:B, 7mr4:B, 1w36:B, 1w36:E
41 5vqa:A 368 204 0.1603 0.1250 0.2255 2.9 5wc2:A
42 6s47:Bi 952 22 0.0383 0.0116 0.5000 3.0
43 1um8:A 327 25 0.0418 0.0367 0.4800 3.5
44 8amz:H 394 24 0.0383 0.0279 0.4583 3.7
45 1oxu:A 353 30 0.0488 0.0397 0.4667 3.8 1oxu:B, 1oxu:C, 1oxv:A, 1oxv:B, 1oxv:D
46 6r84:A 446 38 0.0488 0.0314 0.3684 3.8
47 7x5b:A 312 80 0.0906 0.0833 0.3250 3.9 6blb:A, 7x7p:M, 7x7p:P, 7x7q:M, 7x7q:P
48 4mrn:A 600 36 0.0488 0.0233 0.3889 4.2 4mrn:B, 4mrp:A, 4mrp:B, 4mrr:A, 4mrr:B, 4mrs:A, 4mrs:B, 4mrv:A, 4mrv:B, 6pam:A, 6pam:B, 6pam:C, 6pam:D, 6pam:E, 6pam:F, 6pam:G, 6pam:H, 6pan:A, 6pan:B, 6pao:A, 6pao:B, 6paq:A, 6paq:B, 6par:A, 6par:B, 6par:C, 6par:D, 6par:E, 6par:F, 6vqt:A, 6vqt:B
49 7z6h:K 439 44 0.0627 0.0410 0.4091 4.2
50 6e10:1 719 35 0.0557 0.0223 0.4571 4.2 6e10:2, 6e10:3, 6e10:4, 6e10:5, 6e10:6, 6e11:1, 6e11:3, 6e11:2, 6e11:4, 6e11:5, 6e11:6
51 7jgr:D 441 32 0.0453 0.0295 0.4062 4.2 7jgs:D, 7jk2:D, 7jk3:D, 7jk4:D, 7jk5:D, 7jk6:D
52 3bk7:A 593 67 0.0767 0.0371 0.3284 4.8 3j15:B, 5lw7:B, 1yqt:A, 5yv5:A
53 1im2:A 346 40 0.0418 0.0347 0.3000 5.1 1g3i:T, 1g41:A
54 5xc3:A 168 70 0.0697 0.1190 0.2857 5.2 5xc5:A
55 7yq0:A 173 25 0.0383 0.0636 0.4400 5.3 7yq0:B, 7yq1:A, 7yq1:B, 7yq1:C, 7yq1:D, 7yq1:E, 7yq1:F
56 7crc:B 1112 17 0.0383 0.0099 0.6471 5.3 7crc:A, 7crc:C, 7crc:D, 7xoz:A, 7xoz:B
57 1g3i:A 326 40 0.0418 0.0368 0.3000 5.7 1g3i:B, 1g3i:C, 1g3i:D, 1g3i:E, 1g3i:F, 1g3i:S, 1g3i:U, 1g3i:V, 1g3i:W, 1g3i:X, 1kyi:A, 1kyi:B, 1kyi:C, 1kyi:D, 1kyi:E, 1kyi:F, 1kyi:S, 1kyi:T, 1kyi:U, 1kyi:V, 1kyi:W, 1kyi:X
58 7aju:CL 808 20 0.0383 0.0136 0.5500 5.8 6zqd:CL, 6zqe:CL, 6zqf:CL, 6zqg:CL
59 7cte:D 406 115 0.1115 0.0788 0.2783 5.9 7ctf:D, 7ctg:D, 7jpo:D, 7jpp:D, 7jpq:D, 7jpr:D, 7jps:D, 5uj7:C, 5uj7:D, 5ujm:D
60 2kwi:A 178 66 0.0523 0.0843 0.2273 6.3 2ke5:A, 6zqt:A, 6zqt:B, 6zrn:A, 6zrn:B
61 7d4i:RJ 738 20 0.0383 0.0149 0.5500 6.3 7d5t:RJ, 6lqs:RJ, 6lqt:RJ
62 7ajt:CL 781 20 0.0383 0.0141 0.5500 6.6 7d5s:RJ, 6zqa:CL, 6zqb:CL, 6zqc:CL
63 4nh0:A 861 29 0.0383 0.0128 0.3793 6.6 4n1a:A, 4n1a:B, 4n1a:C, 4n1a:E, 4nh0:B
64 7suk:SI 802 20 0.0383 0.0137 0.5500 6.6 7d63:RJ, 6ke6:RJ, 6lqp:RJ, 6lqq:RJ, 6lqr:RJ, 6lqu:RJ, 6lqv:RJ, 5wlc:SI
65 1iqp:A 326 34 0.0488 0.0429 0.4118 6.8 1iqp:B, 1iqp:C, 1iqp:E
66 1ex7:A 186 19 0.0348 0.0538 0.5263 7.2 1gky:A
67 1qvr:A 803 19 0.0383 0.0137 0.5789 7.2 4fcv:A, 4fcv:B, 4fcv:C, 4fcw:A, 4fcw:C, 4fcw:F, 4fd2:A, 4fd2:B, 4fd2:D, 4lj5:A, 4lj6:A, 4lj7:A, 4lj7:B, 4lj7:C, 4lj8:A, 4lj9:A, 4lja:A, 1qvr:B, 1qvr:C
68 7wtl:CL 610 20 0.0383 0.0180 0.5500 7.7 5wyj:B1, 5wyk:B1
69 1ofh:A 309 40 0.0418 0.0388 0.3000 7.8 1ofh:B, 1ofh:C, 1ofi:A, 1ofi:B, 1ofi:C
70 6j5w:A 816 22 0.0383 0.0135 0.5000 8.2 6j5t:G, 6j5t:C, 6j5t:F, 6j5t:L, 6j5t:O, 6j6i:C, 6j6i:F, 6j6i:G, 6j6i:L, 6j6i:O
71 6vfs:A 295 36 0.0418 0.0407 0.3333 8.2
72 7mhb:A 306 40 0.0418 0.0392 0.3000 8.3 7mhb:B
73 4lt7:A 128 46 0.0453 0.1016 0.2826 8.8 2k3h:A, 4np9:A, 4ns0:A
74 4u00:A 241 26 0.0348 0.0415 0.3846 9.6
75 5txv:B 337 48 0.0523 0.0445 0.3125 9.7 6pxk:J, 6pxk:D, 6pxl:E, 6pxl:J, 5txv:A, 5txv:D, 5txv:G, 5txv:J, 5txv:K, 5txv:N, 5txv:S, 5txv:U
76 6zyw:C 4433 26 0.0418 0.0027 0.4615 9.7
77 8bx8:A 4453 26 0.0418 0.0027 0.4615 9.7 7k58:A, 7k5b:A, 7kek:A
78 1e94:E 408 19 0.0314 0.0221 0.4737 9.7 1do0:A, 1do0:B, 1do0:D, 1do0:E, 1do2:A, 1do2:C, 1e94:F, 1hqy:E, 1hqy:F, 1ht1:E, 1ht1:F, 1ht1:G, 1ht1:I, 1ht2:E, 1ht2:F, 1ht2:G, 1ht2:H, 6pxk:H, 6pxk:L, 6pxk:B, 6pxl:C, 6pxl:D, 6pxl:H, 6pxl:L, 1yyf:A, 1yyf:B
79 5iok:A 142 62 0.0523 0.1056 0.2419 9.8 5d7e:A, 7f4a:A, 6min:A, 6mio:A, 6miq:A
80 6vfs:F 302 121 0.1010 0.0960 0.2397 9.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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