Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GTRPNHTIYINNLNSKIKKDELKKSLHAIFSRFGQILDILVPRRRTPRGQAFVIFKEVSSATNALRSMQGFPFYDKPMAI
QYAKTDR

The query sequence (length=87) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6xh2:A 93 86 0.9655 0.9032 0.9767 5.69e-59 6cmn:A, 3k0j:D, 3k0j:C, 6xh0:A, 6xh1:A, 6xh3:A
2 4pkd:B 240 85 0.8736 0.3167 0.8941 1.82e-49 1aud:A, 7b0y:c, 3bo2:A, 3bo3:A, 3bo4:A, 4c4w:A, 4c4w:E, 3cul:A, 3cul:B, 3cun:A, 3cun:B, 7d7v:C, 5ddo:G, 5ddo:C, 5ddp:D, 5ddp:C, 5ddq:D, 5ddq:C, 5ddr:D, 5ddr:C, 7dlz:A, 7dlz:B, 1drz:A, 7dwh:A, 7dwh:B, 1dz5:A, 1dz5:B, 3egz:A, 5fj4:A, 5fj4:E, 3g8s:A, 3g8s:B, 3g8s:C, 3g8s:D, 3g8t:A, 3g8t:B, 3g8t:C, 3g8t:D, 3g96:A, 3g96:B, 3g96:C, 3g96:D, 3g9c:A, 3g9c:B, 3g9c:C, 3g9c:D, 8gxb:C, 8gxb:D, 8gxb:F, 8gxc:C, 8gxc:D, 8gxc:F, 3hhn:B, 3hhn:D, 3iin:A, 3irw:P, 3iwn:C, 3iwn:D, 8jy0:A, 8jy0:C, 8jy0:E, 3k0j:A, 3k0j:B, 3l3c:A, 3l3c:B, 3l3c:C, 3l3c:D, 6las:E, 6las:D, 6las:C, 6lau:E, 6lau:D, 6lau:C, 6lax:D, 6lax:E, 6lax:C, 6laz:D, 6laz:E, 6laz:C, 1m5k:C, 1m5k:F, 1m5o:C, 1m5o:F, 1m5p:C, 1m5p:F, 1m5v:C, 1m5v:F, 3mum:P, 3mur:P, 3mut:P, 3muv:P, 3mxh:P, 2nz4:A, 2nz4:B, 2nz4:C, 2nz4:D, 2oih:A, 2oj3:A, 3p49:B, 4pr6:A, 4prf:A, 7qr3:A, 7qr3:B, 7qr4:A, 6qx9:1A, 3r1h:A, 3r1h:D, 3r1l:A, 3r1l:D, 1sj3:P, 1sj4:P, 1sjf:A, 6sqn:A, 6sqn:B, 6sqn:C, 6sqq:AAA, 6sqq:BBB, 6sqq:CCC, 1u6b:A, 3ucu:P, 3ucz:P, 3ud3:P, 3ud4:P, 1urn:A, 1urn:B, 1urn:C, 1vbx:A, 1vby:A, 1vbz:A, 1vc0:A, 1vc5:A, 1vc6:A, 7vpx:M, 4w90:B, 4w92:B, 1zzn:A
3 7abg:B 169 84 0.6782 0.3491 0.7024 3.15e-40 7a5p:X, 1a9n:B, 1a9n:D, 7abi:B, 6ah0:p, 6ahd:p, 8c6j:Y, 8ch6:s, 7evo:G, 9fmd:p, 8h6e:2C, 8h6j:2C, 8h6k:2C, 8h6l:2C, 8hk1:G, 8i0p:p, 8i0r:p, 8i0s:p, 8i0t:p, 8i0u:p, 8i0v:p, 8i0w:p, 6icz:p, 6id0:p, 6id1:p, 5mqf:X, 6qdv:Y, 8qo9:2B, 6qx9:2B, 8qxd:2B, 8qzs:2B, 8r08:2B, 8r09:2B, 8r0a:2B, 8r0b:2B, 8rm5:2B, 7vpx:G, 7w59:p, 7w5a:p, 7w5b:p, 5xjc:p, 6y53:b, 6y5q:b, 5yzg:p, 5z56:p, 5z57:p, 5z58:p
4 6f4h:C 96 83 0.7126 0.6458 0.7470 1.23e-35 6f4g:B, 6f4g:E, 6f4h:A, 6f4h:E
5 8ro1:p 76 76 0.5632 0.6447 0.6447 2.07e-35
6 3jb9:k 89 79 0.3793 0.3708 0.4177 1.89e-19
7 7b9v:Y 88 85 0.2989 0.2955 0.3059 4.97e-13 6bk8:r, 7dco:p, 6exn:Y, 6g90:Y, 5gmk:a, 6j6g:a, 6j6h:a, 6j6n:a, 6j6q:a, 5lj3:Y, 5lj5:Y, 5mq0:Y, 5nrl:Y, 7oqb:Y, 7oqe:Y, 5wsg:X, 5y88:p, 5ylz:p, 5zwm:p, 5zwo:p
8 3lqv:B 115 83 0.2874 0.2174 0.3012 4.14e-08 2f9j:B, 3lqv:A, 7q4o:F, 8qo9:B6, 8qxd:B6, 8qzs:B6, 8r08:B6, 8r09:B6, 8r0a:B6, 8r0b:B6, 8rm5:B6
9 2mb0:B 95 84 0.2989 0.2737 0.3095 4.50e-08
10 2fy1:A 108 79 0.2874 0.2315 0.3165 5.50e-07
11 2leb:A 101 84 0.2644 0.2277 0.2738 8.26e-07 2lec:A
12 7s7b:C 79 80 0.2414 0.2658 0.2625 6.85e-06 7s7b:G, 7s7c:C
13 6hpj:B 84 66 0.2414 0.2500 0.3182 5.44e-05
14 7q33:A 93 84 0.2989 0.2796 0.3095 5.76e-05 6pai:D, 6q0r:D, 6q0v:D, 6q0w:D, 6sj7:C, 6ud7:C, 6ue5:C
15 7zew:A 117 81 0.2759 0.2051 0.2963 1.33e-04 7zex:A
16 8i0v:4 161 80 0.2759 0.1491 0.3000 1.37e-04
17 7qde:B 169 65 0.2299 0.1183 0.3077 3.70e-04 7qdd:B
18 2i2y:A 150 63 0.2299 0.1333 0.3175 6.13e-04 9asq:H, 5bmg:A, 5bmg:B, 5bmg:H, 5bmg:D, 5bmg:E, 5bmg:F, 5bmg:G, 5bmh:A, 3v3x:C, 3v3x:D
19 8xxm:3G 84 83 0.2529 0.2619 0.2651 6.55e-04 5k0y:O, 8pj1:o, 8pj2:o, 8pj3:o, 8pj4:o, 8pj5:o, 8pj6:o
20 5mqf:o 223 82 0.2644 0.1031 0.2805 0.001 6id1:y, 7w59:y, 7w5a:y, 7w5b:y
21 8y6o:W 167 71 0.2529 0.1317 0.3099 0.001
22 4ed5:B 169 66 0.2529 0.1302 0.3333 0.002 4ed5:A
23 2yka:A 124 83 0.2414 0.1694 0.2530 0.002
24 2rra:A 99 68 0.2184 0.1919 0.2794 0.003 2kxn:B
25 6dg0:B 84 80 0.2644 0.2738 0.2875 0.003 6dg0:A
26 4a8x:A 88 67 0.2414 0.2386 0.3134 0.004
27 2n7c:A 89 74 0.1954 0.1910 0.2297 0.009
28 4lmz:A 176 81 0.2529 0.1250 0.2716 0.014 3nmr:A, 3nna:A, 3nnc:A, 3nnh:A, 3nnh:C, 3nnh:B, 3nnh:D
29 7csz:A 175 44 0.2184 0.1086 0.4318 0.017
30 8xxn:3B 536 53 0.1724 0.0280 0.2830 0.022 6zon:B, 6zp4:B, 6zvj:B
31 8h6e:4R 106 77 0.2759 0.2264 0.3117 0.025 8h6j:4R, 8qp8:R, 8qp9:R, 8qpk:R, 6qw6:R, 6qx9:R, 8qxd:R, 8r08:R, 8r0a:R
32 8pj1:1 588 53 0.1724 0.0255 0.2830 0.029 6fec:w, 2krb:A, 8oz0:I, 8pj2:1, 8pj3:1, 8pj5:1, 8pj6:1
33 2n82:B 104 46 0.1724 0.1442 0.3261 0.035 2err:A, 7vrl:B
34 6g90:B 193 70 0.2414 0.1088 0.3000 0.038
35 4f02:A 175 83 0.2874 0.1429 0.3012 0.041 1cvj:A, 1cvj:B, 1cvj:C, 1cvj:D, 1cvj:E, 1cvj:F, 1cvj:G, 1cvj:H, 4f02:D
36 2mgz:B 105 46 0.1954 0.1619 0.3696 0.055 4ch1:A, 4cio:A, 2ru3:A
37 6n7p:A 186 70 0.2414 0.1129 0.3000 0.057 6n7r:A, 6n7x:A, 7oqc:B, 7oqe:B, 8w2o:A, 5zwn:Q
38 1fje:B 175 81 0.2644 0.1314 0.2840 0.062 1rkj:A
39 2mxy:A 105 79 0.2644 0.2190 0.2911 0.076 2mz1:A
40 2adb:A 127 75 0.2644 0.1811 0.3067 0.096 3zzy:A, 3zzy:B, 3zzz:A, 3zzz:B
41 4bs2:A 174 51 0.1609 0.0805 0.2745 0.13 4iuf:A, 4y00:A, 4y00:B, 4y00:C, 4y00:D, 4y0f:A, 4y0f:B
42 7evo:D 200 62 0.2069 0.0900 0.2903 0.14 8hk1:D, 6n3e:A, 6n3f:C, 6nsx:A
43 8esq:o 137 68 0.1839 0.1168 0.2353 0.49 8esr:o, 8etg:o, 8eth:o, 8eti:o, 8eup:o, 8euy:o, 8ev3:o
44 3d2w:A 72 43 0.1264 0.1528 0.2558 0.69
45 2mki:A 203 65 0.2069 0.0887 0.2769 0.73
46 3cei:A 213 29 0.1494 0.0610 0.4483 2.7 3cei:B
47 3d34:B 215 22 0.1034 0.0419 0.4091 4.1 3d34:A
48 4uer:b 572 50 0.1494 0.0227 0.2600 4.2
49 6gsn:p 658 50 0.1494 0.0198 0.2600 4.7 8cah:p, 8cas:p, 6fyx:p, 6fyy:p, 6gsm:p, 6zce:p, 6zu9:p
50 1r8d:A 109 38 0.1264 0.1009 0.2895 4.9 1r8d:B
51 4qqb:A 169 71 0.1954 0.1006 0.2394 5.0 1b7f:A, 1b7f:B, 4qqb:B
52 3s1s:A 870 52 0.1724 0.0172 0.2885 5.1
53 1u08:A 382 45 0.1609 0.0366 0.3111 5.7 1u08:B
54 7vki:A 113 31 0.1724 0.1327 0.4839 5.8
55 3m1c:A 719 42 0.1724 0.0209 0.3571 7.2
56 4dtf:A 356 42 0.1609 0.0393 0.3333 7.7 4dth:A, 4dtl:A, 4e1c:A, 4e1d:A, 4e1f:A, 4gqk:A
57 7z8f:e 4579 39 0.1379 0.0026 0.3077 9.2 5owo:A, 8pr2:f, 8ptk:m, 8ptk:n, 7z8f:f, 7z8f:m, 7z8f:n, 7z8h:A
58 8ptk:f 4502 39 0.1379 0.0027 0.3077 9.3 8ptk:e

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218