BioLiP

>protein
GTNTGGVLVITDTIIVKSGQTYDGKGIKIIAQGMGDGSQSENQKPIFKLEKGANLKNVIIGAPGCDGIHCYGDNVVENVV
WEDVGEDALTVKSEGVVEVIGGSAKEAANAVFQLNAPCTFKVKNFTATNIGKLVRQNGNTTFKVVIYLEDVTLNNVKSCV
AKSDSPVSELWYHNLNVNNCKTLFEFPSQSQIHQY

The query sequence (length=195) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4yz0:A	198	195	0.9897	0.9747	0.9897	6.86e-142	4ew9:A, 4ew9:B, 3t9g:A, 3t9g:B, 4yz0:B, 4yza:A, 4yza:B, 4yzq:A, 4yzq:B, 4yzx:A, 4yzx:B, 4z03:A, 4z03:B, 4z05:A, 4z05:B, 4z06:A, 4z06:B
2	1ee6:A	197	179	0.4974	0.4924	0.5419	5.27e-65
3	4u49:B	318	134	0.2564	0.1572	0.3731	3.80e-09
4	3b4n:A	314	137	0.2513	0.1561	0.3577	3.83e-09	3b4n:B, 3b8y:A, 3b90:A, 3b90:B
5	3b8y:B	294	101	0.2205	0.1463	0.4257	2.38e-08
6	7jzw:A	427	39	0.0821	0.0375	0.4103	0.27	6b44:A, 6b45:A, 6b47:A, 6b48:A, 7ecv:A, 7ecw:A, 7elm:A, 7elm:K, 7eln:A, 7eln:X, 7eqg:B, 7jzx:A, 7jzy:A, 7jzz:A, 6ne0:A, 7t3j:A, 7t3k:A, 7t3k:a, 7t3l:A, 7t3l:a, 7taw:A, 7taw:a, 7tax:A, 5uz9:A, 6vqv:C, 6vqw:B, 6vqx:B, 7we6:A, 7we6:X, 6whi:A, 7yhs:A
7	6w1x:A	314	39	0.0821	0.0510	0.4103	0.29
8	1pj6:A	828	97	0.1641	0.0386	0.3299	0.98	3gsi:A, 1pj5:A, 1pj7:A
9	3ib7:A	295	35	0.0769	0.0508	0.4286	7.2	2hy1:A, 2hyo:A, 2hyp:A, 3ib8:A
10	5yo9:B	366	55	0.0718	0.0383	0.2545	8.4	5yoa:B

[Back]