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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GTLGRAIYTVGNWIRGTGQALDRVGSLLQGSHRIEEHLSRHRTLMNVFDKSPLVDKDVFVAPSASVIGDVQIGKGSSIWY
GCVLRGDVNNISVGSGTNIQDNTLVHVAKTNISGKVLPTLIGDNVTVGHSAVIHGCTVEDDAFVGMGATLLDGVVVEKHA
MVAAGSLVKQNTRIPSGEVWGGNPAKFMRKLTDEEIVYISQSAKNYINLAQIHASENSKSFEQIEVERALRKKYARKDED
YDSMLGITRETPPELILPDNVLPGGKPV

The query sequence (length=268) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7aqq:y 268 268 1.0000 1.0000 1.0000 0.0 7ar7:y, 7ar8:y, 7arb:y, 8bef:y, 8bpx:y, 8bq5:y, 8bq6:y
2 8e73:G2 258 263 0.7836 0.8140 0.7985 5.28e-161 6x89:G2
3 7aqq:z 233 233 0.6828 0.7854 0.7854 1.06e-138 7a23:q, 7a23:p, 7a24:q, 7a24:p, 7ar7:z, 7ar8:z, 7arb:z, 8bef:z, 8bpx:z, 8bq5:z, 8bq6:z
4 3ixc:A 166 161 0.3172 0.5120 0.5280 7.78e-57
5 8bef:x 210 197 0.2799 0.3571 0.3807 6.37e-41 8bpx:x, 8bq5:x, 8bq6:x
6 3tio:F 177 160 0.2612 0.3955 0.4375 6.42e-40 3tio:A, 3tio:B, 3tio:C, 3tio:D, 3tio:E, 3tis:A, 3tis:B, 3tis:C
7 6ive:A 168 143 0.2351 0.3750 0.4406 1.40e-38 6ive:B, 6ive:C, 6ive:D, 6ive:E, 6ive:F
8 3r3r:A 184 180 0.2649 0.3859 0.3944 1.89e-38
9 6sc4:B 178 177 0.2276 0.3427 0.3446 8.91e-37 6sc4:A, 6sc4:C, 6sc4:D, 6sc4:E
10 4n27:A 175 159 0.2276 0.3486 0.3836 3.19e-36 4n27:B, 4n27:C, 4n27:D, 4n27:E, 4n27:F
11 2fko:A 173 164 0.2313 0.3584 0.3780 4.11e-34 1v3w:A, 1v67:A
12 3vnp:A 171 166 0.2201 0.3450 0.3554 1.29e-33 3vnp:B, 3vnp:C
13 7zw9:A 173 164 0.2052 0.3179 0.3354 3.42e-33
14 8gpm:A 193 160 0.2015 0.2798 0.3375 2.10e-24 8gpp:A, 8gpp:B, 8gpp:C
15 1qrl:A 214 198 0.2090 0.2617 0.2828 3.06e-12 3otm:A, 3otz:A, 3ou9:A, 3oup:A, 3ow5:A, 1qq0:A, 1qre:A, 1qrf:A, 1qrg:A, 1qrm:A, 1thj:A, 1thj:B, 1thj:C
16 3kwc:A 205 138 0.1567 0.2049 0.3043 8.50e-09 3kwc:B, 3kwc:C, 3kwc:D, 3kwc:E, 3kwc:F, 3kwd:A, 3kwe:A
17 7o54:A 165 140 0.1642 0.2667 0.3143 1.63e-08
18 7z8m:V 182 137 0.1082 0.1593 0.2117 1.93e-05
19 7txp:A 209 161 0.1716 0.2201 0.2857 3.20e-05 7txq:A, 7txs:A
20 3nz2:J 185 121 0.1157 0.1676 0.2562 4.97e-05 3ect:A, 3nz2:A, 3nz2:C, 3nz2:B, 3nz2:D, 3nz2:E, 3nz2:F, 3nz2:G, 3nz2:H, 3nz2:I, 3nz2:K, 3nz2:L
21 4mzu:F 294 151 0.1604 0.1463 0.2848 6.05e-05 4mzu:A, 4mzu:C, 4mzu:E, 4mzu:B, 4mzu:D, 4mzu:G, 4mzu:I, 4mzu:K, 4mzu:H, 4mzu:J, 4mzu:L, 4zu4:A, 4zu4:B, 4zu4:C
22 4hus:A 212 96 0.0970 0.1226 0.2708 0.004 4hur:A, 4hur:B, 4hur:C, 4hus:C, 6x3c:A, 6x3c:F, 6x3c:B, 6x3c:C, 6x3c:D, 6x3c:E, 6x3j:A, 6x3j:B, 6x3j:D, 6x3j:C, 6x3j:E, 6x3j:F
23 3igj:C 188 133 0.1269 0.1809 0.2556 0.007 3igj:A, 3igj:B
24 3fsb:A 260 171 0.1493 0.1538 0.2339 0.022 3fs8:A, 3fs8:B, 3fsb:B, 3fsc:A, 3fsc:B
25 4eaa:A 210 128 0.1231 0.1571 0.2578 0.048 4ea7:A, 4ea8:A, 4ea9:A, 4eab:A
26 7s3u:A 145 112 0.1007 0.1862 0.2411 0.11 7s3w:A, 7s41:A, 7s42:A, 7s43:A, 7s44:A, 7s45:A
27 7ojp:Z 261 112 0.1231 0.1264 0.2946 0.12 5dep:A, 5dep:B, 5dep:D, 5dep:E, 5dep:F, 5dg3:A, 5dg3:B, 5dg3:C, 5dg3:D, 5dg3:E, 7oj6:A, 7oj6:B, 7oj6:C, 7ojp:A, 7ojp:B, 7ojp:C, 7ojp:D, 7ojp:E, 7ojp:F, 7ojp:G, 7ojp:H, 7ojp:I, 7ojp:J, 7ojp:K, 7ojp:L, 7ojp:M, 7ojp:N, 7ojp:O, 7ojp:P, 7ojp:Q, 7ojp:R, 7ojp:S, 7ojp:T, 7ojp:U, 7ojp:V, 7ojp:W, 7ojp:X, 7ojp:Y, 7ojp:a, 7ojp:b, 7ojp:c, 7ojp:d, 7ojq:A, 7ojq:B, 7ojq:C, 7ojw:A, 7ojw:B, 7ojw:C, 7ojy:A, 7ojy:B, 7ojy:C, 7ok1:A, 7ok1:B, 7ok1:C, 7ok2:1, 7ok2:Y, 7ok2:Z, 7ok2:2, 7ok2:4, 7ok2:3, 7ok2:A, 7ok2:B, 7ok2:C, 7ok2:D, 7ok2:E, 7ok2:F, 7ok2:G, 7ok2:I, 7ok2:H, 7ok2:J, 7ok2:L, 7ok2:K, 7ok2:M, 7ok2:N, 7ok2:O, 7ok2:P, 7ok2:Q, 7ok2:R, 7ok2:S, 7ok2:T, 7ok2:U, 7ok2:V, 7ok2:X, 7ok2:W, 7oka:A, 7oka:C, 7oka:B, 7oka:D, 7oka:E, 7oka:F, 7oka:G, 7oka:H, 7oka:I, 7oka:M, 7oka:N, 7oka:O, 7oka:J, 7oka:K, 7oka:L, 7oka:P, 7oka:Q, 7oka:R, 7oka:S, 7oka:T, 7oka:U, 7oka:V, 7oka:W, 7oka:X, 7oka:Y, 7oka:Z, 7oka:a, 7oka:b, 7oka:d, 7oka:c, 7okb:A, 7okb:B, 7okb:C, 7okb:D, 7okb:E, 7okb:F, 7okb:G, 7okb:H, 7okb:I, 7okb:M, 7okb:N, 7okb:O, 7okb:J, 7okb:K, 7okb:L, 7okb:P, 7okb:Q, 7okb:R, 7okb:S, 7okb:T, 7okb:U, 7okb:V, 7okb:W, 7okb:X, 7okb:Y, 7okb:Z, 7okb:a, 7okb:b, 7okb:c, 7okb:d, 7t5r:A, 7t5r:B, 7t5r:C, 7t5r:D, 7t5r:F, 7t5r:E, 7t5s:A, 7t5s:B, 7t5s:C, 7t5s:D, 7t5s:F, 7t5s:E, 7t5x:A, 7t5x:B, 7t5x:C, 7t5x:D, 7t5x:F, 7t5x:E, 7t5z:A, 7t5z:B, 7t5z:C, 7t5z:D, 7t5z:E, 7t5z:F, 7t60:A, 7t60:B, 7t60:C, 7t60:D, 7t60:F, 7t60:E, 7t61:A, 7t61:B, 7t61:C, 7t61:D, 7t61:E, 7t61:F, 6uee:A, 6uee:C, 6uee:B, 6uee:D, 6uee:E, 6uee:F, 6ueg:A, 6ueg:C, 6ueg:B, 6ueg:D, 6ueg:E, 6ueg:F
28 8e62:C 183 68 0.0746 0.1093 0.2941 0.14 8e62:A, 8e62:B, 8e62:D, 8e62:E, 8e62:F
29 8j40:A 209 58 0.0746 0.0957 0.3448 0.17
30 4n69:A 243 79 0.0858 0.0947 0.2911 0.22 4n69:B, 4n6b:A, 4n6b:E, 4n6b:B, 4n6b:C, 4n6b:D, 4n6b:F
31 4n69:A 243 40 0.0448 0.0494 0.3000 2.0 4n69:B, 4n6b:A, 4n6b:E, 4n6b:B, 4n6b:C, 4n6b:D, 4n6b:F
32 4m99:A 206 68 0.0970 0.1262 0.3824 0.24 4m99:B, 4m99:C
33 7d72:A 407 84 0.0821 0.0541 0.2619 0.34 7d72:B, 7d72:C, 7d72:D, 7d73:A, 7d73:B, 7d73:C, 7d73:D, 7d74:A, 7d74:D, 7d74:B, 7d74:C
34 7okc:A 264 97 0.0858 0.0871 0.2371 0.42 2aq9:A, 6hy2:X, 4j09:A, 2jf3:A, 6p9p:A, 6p9q:A, 6p9r:A, 6p9s:A, 6p9t:A, 2qia:A, 2qiv:X
35 2iyn:B 124 27 0.0560 0.1210 0.5556 0.54 2iyn:A, 2iyn:C, 1zes:A, 1zes:B, 1zes:C
36 2oi6:B 452 61 0.0821 0.0487 0.3607 0.57 4aa7:A, 4aa7:B, 1fwy:A, 1fwy:B, 1hv9:A, 1hv9:B, 2oi5:A, 2oi5:B, 2oi6:A, 2oi7:A, 2oi7:B, 3twd:A, 3twd:B
37 4b09:A 218 23 0.0485 0.0596 0.5652 0.89 4b09:B, 4b09:C, 4b09:D, 4b09:E, 4b09:F, 4b09:G, 4b09:I, 4b09:K
38 6jlz:I 430 113 0.0970 0.0605 0.2301 0.93
39 6wye:A 261 40 0.0485 0.0498 0.3250 1.3 7ra4:A, 7ra4:C, 7ra4:B, 6wye:C, 6wye:B, 6wye:D, 6wye:F, 6wye:E
40 4hzd:A 250 47 0.0522 0.0560 0.2979 1.6 4hzc:F, 4hzc:J
41 7l7y:AAA 217 96 0.0858 0.1060 0.2396 1.7 7l7z:AAA, 7l81:AAA, 7l82:AAA
42 1h1y:B 219 71 0.0896 0.1096 0.3380 2.2 1h1z:A, 1h1z:B
43 3gvd:I 272 48 0.0448 0.0441 0.2500 2.4 3gvd:A, 3gvd:C, 3gvd:B, 3gvd:D, 3gvd:F, 3gvd:E, 3gvd:G, 3gvd:H, 3gvd:J, 3gvd:K, 3gvd:L
44 3gvd:I 272 53 0.0597 0.0588 0.3019 5.6 3gvd:A, 3gvd:C, 3gvd:B, 3gvd:D, 3gvd:F, 3gvd:E, 3gvd:G, 3gvd:H, 3gvd:J, 3gvd:K, 3gvd:L
45 5u2k:A 190 135 0.1269 0.1789 0.2519 3.1 5v0z:A, 5v0z:C, 5v0z:B, 3v4e:A, 3v4e:C, 3v4e:B
46 4ihh:E 340 136 0.1157 0.0912 0.2279 3.2 4ihf:D, 4ihf:E, 4ihf:F, 4ihf:A, 4ihf:B, 4ihf:C, 4ihg:E, 4ihg:C, 4ihg:B, 4ihg:D, 4ihh:A, 4ihh:C, 4ihh:B, 4ihh:D, 4ihh:F, 6p83:A, 6p83:C, 6p83:B, 6p84:A, 6p84:C, 6p84:B, 6p85:A, 6p85:C, 6p85:B, 6p86:A, 6p86:C, 6p86:B, 6p87:A, 6p87:C, 6p87:B, 6p88:A, 6p88:C, 6p88:B, 6p89:A, 6p89:C, 6p89:B, 6p8a:A, 6p8a:C, 6p8a:B, 6p8b:A, 6p8b:C, 6p8b:B
47 1t3d:A 262 48 0.0448 0.0458 0.2500 3.5 7e3y:A, 7e3y:C, 7e3y:B, 8i04:A, 8i04:C, 8i04:B, 8i06:A, 8i06:B, 8i09:A, 8i09:B, 8i09:C, 8i09:D, 8i09:E, 8i09:F, 8i09:G, 8i09:H, 8i09:I, 8i09:J, 8i09:K, 8i09:L, 6jvu:A, 6jvu:C, 6jvu:B, 6jvu:D, 6jvu:F, 6jvu:E, 1t3d:B, 1t3d:C
48 3r8y:A 203 80 0.1045 0.1379 0.3500 3.7 3r8y:C, 3r8y:D, 3r8y:F
49 2gtl:N 220 57 0.0597 0.0727 0.2807 4.9
50 2pk3:A 309 50 0.0709 0.0615 0.3800 5.4 2pk3:B
51 4h7o:A 258 36 0.0373 0.0388 0.2778 6.4 4h7o:C, 4h7o:B
52 3bss:A 194 81 0.0821 0.1134 0.2716 8.7 3bsy:A, 3bsy:C, 3bsy:B, 5t2y:A, 5t2y:B, 5tyh:A, 2vhe:A, 2vhe:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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