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BioLiP
>protein
GSTSAMWACQHCTFMNQPGTGHCEMCSLPRT

The query sequence (length=31) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1nj3:A 31 31 1.0000 1.0000 1.0000 3.75e-18 1q5w:A
2 3a9j:C 32 30 0.4516 0.4375 0.4667 4.13e-05 9avt:C, 9avw:C, 7e62:C, 7e62:J, 2wwz:C, 2wx0:C, 2wx0:G, 2wx1:C
3 2crc:A 52 20 0.3548 0.2115 0.5500 0.012
4 8im5:A 66 20 0.3548 0.1667 0.5500 0.013 3b0a:E
5 7yui:B 232 24 0.3871 0.0517 0.5000 0.042 3b08:K, 3b08:B, 3b08:E, 3b08:H, 3b0a:B
6 2k1p:A 33 30 0.3226 0.3030 0.3333 0.045
7 2c6a:A 46 25 0.3226 0.2174 0.4000 0.44 2c6b:A, 4xxb:B
8 8pp6:K 36 25 0.2581 0.2222 0.3200 0.70
9 8hyj:C 285 24 0.3548 0.0386 0.4583 1.2
10 2ebq:A 47 24 0.2581 0.1702 0.3333 1.2 2gqe:A, 2k0c:A
11 7mo2:B 38 24 0.2581 0.2105 0.3333 1.2 3ch5:B, 7mo2:D
12 3mvd:L 394 16 0.2581 0.0203 0.5000 1.5 3mvd:K
13 2xsj:C 104 17 0.2581 0.0769 0.4706 1.9 2xsj:F
14 6i34:B 954 18 0.2258 0.0073 0.3889 2.0 6i33:A, 6i34:A, 6i34:C, 6i34:D, 6i35:A, 6i35:B, 6i35:C, 6i35:D
15 2d9g:A 53 22 0.2903 0.1698 0.4091 2.1
16 3or2:C 104 17 0.2581 0.0769 0.4706 2.5
17 5cd4:I 494 19 0.2903 0.0182 0.4737 3.3 5cd4:U, 5h9e:A, 5h9f:A, 4tvx:I, 4tvx:U, 4u7u:M
18 7mnr:B 40 24 0.2581 0.2000 0.3333 4.8
19 8ate:A 502 15 0.2258 0.0139 0.4667 8.8
20 2iya:A 392 13 0.2258 0.0179 0.5385 8.9 2iya:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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