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BioLiP
>protein
GSSGSSGLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYLCLRRYGYDSNLFSFESGRRC
QTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIITRNSHPAELDLPRAPQPPNALGYTVSS

The query sequence (length=146) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2kup:A 146 146 1.0000 1.0000 1.0000 6.98e-109 2ys5:A
2 1xr0:B 129 127 0.6233 0.7054 0.7165 1.02e-68 2mfq:A
3 1uef:A 105 50 0.1712 0.2381 0.5000 7.47e-13 1uef:B
4 3ml4:C 208 89 0.1849 0.1298 0.3034 5.07e-04 3ml4:A, 3ml4:B, 3ml4:D
5 3hlf:A 425 61 0.1164 0.0400 0.2787 0.11 3hld:A, 3hle:A, 3hlg:A
6 1wee:A 72 67 0.1507 0.3056 0.3284 0.34
7 1irs:A 112 34 0.0959 0.1250 0.4118 2.1 5u1m:A
8 6lum:D 146 27 0.0822 0.0822 0.4444 2.2 6lum:H, 6lum:N
9 6qh1:C 242 75 0.1301 0.0785 0.2533 2.5
10 1qzf:A 519 78 0.1096 0.0308 0.2051 3.7 3dl5:A, 3dl5:B, 3dl5:C, 3dl5:D, 3dl5:E, 3dl6:A, 3dl6:B, 3dl6:C, 3dl6:D, 3dl6:E, 3hj3:A, 3hj3:B, 3hj3:C, 3hj3:D, 4ky8:A, 4ky8:B, 4ky8:C, 4ky8:D, 4ky8:E, 2oip:A, 2oip:B, 2oip:C, 2oip:D, 2oip:E, 6ojs:A, 6ojs:C, 6ojs:B, 6ojs:E, 6ojs:D, 6pf7:A, 6pf7:B, 6pf7:C, 6pf7:D, 6pf7:E, 6pf8:A, 6pf8:B, 6pf8:C, 6pf8:D, 6pf8:E, 6pf9:A, 6pf9:B, 6pf9:C, 6pf9:D, 6pf9:E, 6pfa:A, 6pfa:B, 6pfa:C, 6pfa:D, 6pfa:E, 6pfb:A, 6pfb:B, 6pfb:C, 6pfb:D, 6pfb:E, 6pfc:A, 6pfc:B, 6pfc:D, 6pfc:C, 6pfc:E, 6pfd:A, 6pfd:B, 6pfd:C, 6pfd:D, 6pfd:E, 6pfe:A, 6pfe:B, 6pfe:C, 6pfe:E, 6pfe:D, 6pff:A, 6pff:B, 6pff:C, 6pff:D, 6pff:E, 6pfg:A, 6pfg:B, 6pfg:C, 6pfg:D, 6pfg:E, 6pfh:A, 6pfh:B, 6pfh:C, 6pfh:D, 6pfh:E, 6pfi:A, 6pfi:B, 6pfi:C, 6pfi:D, 6pfi:E, 4q0d:E, 4q0d:A, 4q0d:B, 4q0d:C, 4q0d:D, 4q0e:A, 4q0e:C, 4q0e:B, 4q0e:D, 4q0e:E, 1qzf:B, 1qzf:C, 1qzf:D, 1qzf:E, 1sej:A, 1sej:B, 1sej:C, 1sej:D, 1sej:E, 6wep:A, 6wep:B
11 7ymi:B 479 21 0.0753 0.0230 0.5238 6.3 7ymi:b, 7ymm:1B, 7ymm:2B, 7ymm:3B, 7ymm:4B
12 1e0z:A 128 26 0.0548 0.0625 0.3077 6.9 1e10:A
13 5hzr:A 552 53 0.1301 0.0344 0.3585 8.7

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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