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BioLiP
>protein
GSSGSSGEGCYVATLEKCATCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFASGPSS
G

The query sequence (length=81) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2dlo:A 81 81 1.0000 1.0000 1.0000 3.21e-56
2 1x3h:A 80 82 0.3951 0.4000 0.3902 4.59e-11
3 2d8x:A 70 81 0.3951 0.4571 0.3951 8.97e-11
4 2ehe:A 82 84 0.4568 0.4512 0.4405 6.98e-10
5 2dj7:A 80 82 0.3951 0.4000 0.3902 1.17e-09
6 2cur:A 69 81 0.3704 0.4348 0.3704 1.01e-08
7 2dar:A 90 91 0.4074 0.3667 0.3626 1.10e-08
8 1v6g:A 81 86 0.3951 0.3951 0.3721 3.26e-07
9 2d8z:A 70 81 0.3580 0.4143 0.3580 4.58e-07
10 1x63:A 82 83 0.3704 0.3659 0.3614 4.81e-07
11 2cuq:A 80 82 0.3827 0.3875 0.3780 6.18e-07
12 1x4k:A 72 83 0.3333 0.3750 0.3253 8.33e-06
13 1wyh:A 72 54 0.2593 0.2917 0.3889 1.66e-05
14 2rgt:B 154 60 0.2716 0.1429 0.3667 1.77e-05 2rgt:A
15 2rgt:B 154 57 0.2716 0.1429 0.3860 0.003 2rgt:A
16 2jtn:A 182 60 0.2716 0.1209 0.3667 1.91e-05
17 2jtn:A 182 58 0.2716 0.1209 0.3793 0.003
18 6cme:A 154 63 0.2469 0.1299 0.3175 2.29e-05 6cme:B, 3mmk:A, 3mmk:B
19 6cme:A 154 57 0.2346 0.1234 0.3333 0.002 6cme:B, 3mmk:A, 3mmk:B
20 2cor:A 79 84 0.3580 0.3671 0.3452 1.09e-04
21 2d8y:A 91 93 0.3580 0.3187 0.3118 1.92e-04
22 1wig:A 73 66 0.2963 0.3288 0.3636 2.92e-04
23 6u4m:A 65 57 0.2222 0.2769 0.3158 5.42e-04 6u4n:B
24 2egq:A 77 72 0.3210 0.3377 0.3611 7.43e-04
25 1x64:A 89 91 0.3580 0.3258 0.3187 7.73e-04
26 7qb0:A 127 61 0.2222 0.1417 0.2951 0.001
27 7qb0:A 127 57 0.1975 0.1260 0.2807 0.008
28 4jcj:C 150 37 0.2222 0.1200 0.4865 0.005 4jcj:A, 4jcj:B
29 7lt9:B 131 36 0.1728 0.1069 0.3889 0.005 7d2s:B, 7d2t:B, 7d2t:D, 7d2u:B, 1nyp:A, 1u5s:B
30 7lt9:B 131 34 0.1358 0.0840 0.3235 6.2 7d2s:B, 7d2t:B, 7d2t:D, 7d2u:B, 1nyp:A, 1u5s:B
31 3f6q:B 72 64 0.2346 0.2639 0.2969 0.006 4hi8:B, 4hi9:B
32 2mbv:A 96 36 0.1852 0.1562 0.4167 0.007
33 2dfy:X 158 36 0.1852 0.0949 0.4167 0.007 2dfy:C, 1rut:X
34 3ixe:B 70 64 0.2346 0.2714 0.2969 0.009
35 2o10:A 60 59 0.1852 0.2500 0.2542 0.011
36 1g47:A 70 64 0.2346 0.2714 0.2969 0.014 2kbx:B
37 1b8t:A 192 52 0.1852 0.0781 0.2885 0.015 1ctl:A
38 1b8t:A 192 59 0.1975 0.0833 0.2712 0.076 1ctl:A
39 1x62:A 79 69 0.2963 0.3038 0.3478 0.016
40 1a7i:A 60 60 0.1728 0.2333 0.2333 0.022
41 1x61:A 72 50 0.2099 0.2361 0.3400 0.048
42 2o13:A 58 60 0.1852 0.2586 0.2500 0.068
43 2lxd:A 123 56 0.1975 0.1301 0.2857 0.096 2l6y:B, 2l6z:C
44 2co8:A 82 84 0.3333 0.3293 0.3214 0.12
45 8f5o:B 1134 34 0.1358 0.0097 0.3235 0.29 8f5p:B
46 4kfz:B 148 56 0.1975 0.1081 0.2857 0.50 4kfz:A, 2xjy:A, 2xjz:A, 2xjz:B, 2xjz:C, 2xjz:D, 2xjz:E, 2ypa:C
47 2dmi:A 115 60 0.2222 0.1565 0.3000 1.5
48 6mif:A 79 34 0.1358 0.1392 0.3235 2.0
49 2ct2:A 88 90 0.3333 0.3068 0.3000 2.0 5fey:A, 5fey:B
50 8uy2:D 557 38 0.1975 0.0287 0.4211 2.0 8uy2:A, 8uy2:B, 8uy2:C
51 8uy1:A 598 38 0.1975 0.0268 0.4211 2.1 8uy1:D, 8uy1:B, 8uy1:C
52 2d8q:A 70 81 0.3210 0.3714 0.3210 3.0 2dan:A
53 2miu:A 98 60 0.1975 0.1633 0.2667 3.8
54 6nus:A 715 21 0.0864 0.0098 0.3333 4.4
55 8j5u:A 534 31 0.1728 0.0262 0.4516 4.4 8j5q:A, 8j5s:A
56 8gwe:A 931 21 0.0864 0.0075 0.3333 5.8 7aap:A, 7b3b:A, 7b3c:A, 7b3d:A, 7btf:A, 7bv1:A, 7bv2:A, 7bw4:A, 7bzf:A, 7c2k:A, 7ctt:A, 7cxm:A, 7cxn:A, 7cyq:A, 7d4f:A, 7dfg:A, 7dfh:A, 7doi:A, 7dok:A, 7dte:A, 7ed5:A, 7egq:A, 7egq:N, 7eiz:A, 8gw1:A, 8gwb:A, 8gwf:A, 8gwg:A, 8gwi:A, 8gwk:A, 8gwm:A, 8gwn:A, 8gwo:A, 8gy6:A, 7krn:A, 7kro:A, 7krp:A, 7l1f:A, 6nur:A, 7oyg:A, 7oyg:D, 7ozu:A, 7ozv:A, 7rdx:A, 7rdy:A, 7rdz:A, 7re0:A, 7re1:A, 7re2:A, 7re3:A, 7re3:G, 8sq9:A, 8sqj:A, 8sqk:A, 7uo4:A, 7uo7:A, 7uo9:A, 7uob:A, 7uoe:A, 6xez:A, 6xqb:A, 6yyt:A
57 7thm:A 860 21 0.0864 0.0081 0.3333 6.0
58 8xrt:F 751 37 0.1358 0.0146 0.2973 6.8 8xrt:E, 8xrt:A, 8xrt:B, 8xrt:C, 8xrt:D, 8xru:A, 8xru:B, 8xrv:A, 8xrv:B, 8xrv:C, 8xrv:F, 8xrv:D, 8xrv:E, 8xrx:A, 8xrx:D, 8xrx:F, 8xrx:B, 8xrx:C
59 6f1c:A 291 27 0.1235 0.0344 0.3704 7.2 6f1c:C, 6f1d:A, 6f1h:A, 6f1h:C, 6f39:A, 6f39:B
60 8xrx:E 611 37 0.1358 0.0180 0.2973 8.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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