Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GSSGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDISGPSSG

The query sequence (length=72) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1x4l:A 72 72 1.0000 1.0000 1.0000 6.82e-48
2 2egq:A 77 77 0.4722 0.4416 0.4416 9.25e-19
3 2cur:A 69 73 0.4722 0.4928 0.4658 5.08e-15
4 2d8z:A 70 74 0.4444 0.4571 0.4324 1.96e-12
5 2cup:A 101 69 0.3750 0.2673 0.3913 4.02e-11
6 2cup:A 101 33 0.1528 0.1089 0.3333 3.2
7 1x4k:A 72 74 0.3750 0.3750 0.3649 1.69e-09
8 2miu:A 98 58 0.3056 0.2245 0.3793 1.62e-08
9 2d8x:A 70 74 0.4167 0.4286 0.4054 2.77e-07
10 2ehe:A 82 84 0.4306 0.3780 0.3690 4.07e-07
11 1x63:A 82 84 0.4167 0.3659 0.3571 4.43e-07
12 2cuq:A 80 84 0.3889 0.3500 0.3333 6.02e-07
13 2dj7:A 80 74 0.3889 0.3500 0.3784 2.83e-05
14 2dar:A 90 67 0.3056 0.2444 0.3284 4.66e-05
15 1wyh:A 72 57 0.2639 0.2639 0.3333 1.25e-04
16 1x62:A 79 66 0.2778 0.2532 0.3030 1.30e-04
17 1x64:A 89 89 0.3333 0.2697 0.2697 0.002
18 1cxx:A 59 34 0.1667 0.2034 0.3529 0.009 1ibi:A, 1qli:A
19 1x3h:A 80 84 0.3889 0.3500 0.3333 0.015
20 1b8t:A 192 66 0.2917 0.1094 0.3182 0.016 1ctl:A
21 6cme:A 154 43 0.2083 0.0974 0.3488 0.020 6cme:B, 3mmk:A, 3mmk:B
22 2xqn:T 125 63 0.2639 0.1520 0.3016 0.023 2iyb:E, 2iyb:F, 2iyb:G, 2iyb:H
23 2xqn:T 125 55 0.2361 0.1360 0.3091 0.44 2iyb:E, 2iyb:F, 2iyb:G, 2iyb:H
24 7qb0:A 127 55 0.2222 0.1260 0.2909 0.17
25 7qb0:A 127 68 0.2500 0.1417 0.2647 1.1
26 1v6g:A 81 85 0.3889 0.3457 0.3294 0.19
27 6u4m:A 65 57 0.2361 0.2615 0.2982 0.32 6u4n:B
28 7lt9:B 131 45 0.1944 0.1069 0.3111 0.34 7d2s:B, 7d2t:B, 7d2t:D, 7d2u:B, 1nyp:A, 1u5s:B
29 1j2o:A 114 43 0.2083 0.1316 0.3488 0.74
30 2cor:A 79 84 0.3611 0.3291 0.3095 1.2
31 4kfz:B 148 77 0.3333 0.1622 0.3117 1.2 4kfz:A, 2xjy:A, 2xjz:A, 2xjz:B, 2xjz:C, 2xjz:D, 2xjz:E, 2ypa:C
32 2o10:A 60 34 0.1389 0.1667 0.2941 1.4
33 1iml:A 76 44 0.1806 0.1711 0.2955 1.5
34 2cu8:A 76 47 0.2222 0.2105 0.3404 1.5
35 3jze:A 344 24 0.1806 0.0378 0.5417 1.7 3jze:B, 3jze:C, 3jze:D
36 2lzu:A 72 40 0.1806 0.1806 0.3250 2.1
37 1wge:A 83 49 0.2222 0.1928 0.3265 2.1
38 2ctu:A 73 29 0.1389 0.1370 0.3448 2.2
39 8val:E 337 49 0.2083 0.0445 0.3061 2.8 1a5t:A, 8giy:E, 8giz:E, 8gj0:E, 8gj1:E, 8gj2:E, 8gj3:E, 3glf:E, 3glf:J, 3glg:E, 3glg:J, 3gli:E, 3gli:J, 1jr3:E, 8vam:E, 8vap:E, 8vaq:E, 8var:E, 8vas:E, 8vat:E, 1xxh:E, 1xxh:J, 1xxi:E, 1xxi:J
40 2o13:A 58 34 0.1389 0.1724 0.2941 2.9
41 2eoy:A 46 40 0.1944 0.3043 0.3500 3.6
42 3mjm:A 344 24 0.1667 0.0349 0.5000 3.8 2e25:A, 2eg6:A, 2eg6:B, 2eg7:A, 2eg7:B, 2eg8:A, 2eg8:B, 1j79:A, 1j79:B, 3mjm:B, 1xge:A, 1xge:B, 2z24:A, 2z24:B, 2z25:A, 2z25:B, 2z26:A, 2z26:B, 2z27:A, 2z27:B, 2z28:A, 2z28:B, 2z29:A, 2z29:B, 2z2a:A, 2z2a:B, 2z2b:A
43 8ckb:E066 503 19 0.1250 0.0179 0.4737 6.3 8ckb:E494, 8ckb:E264, 8ckb:E265, 8ckb:E506, 8ckb:E277, 8ckb:E009, 8ckb:E021, 8ckb:E030, 8ckb:E044, 8ckb:E053, 8ckb:E062, 8ckb:E071, 8ckb:E080, 8ckb:E088, 8ckb:E097, 8ckb:E106, 8ckb:E120, 8ckb:E129, 8ckb:E138, 8ckb:E142, 8ckb:E151, 8ckb:E160, 8ckb:E173, 8ckb:E182, 8ckb:E191, 8ckb:E195, 8ckb:E204, 8ckb:E213, 8ckb:E221, 8ckb:E230, 8ckb:E236, 8ckb:E245, 8ckb:E254, 8ckb:E269, 8ckb:E281, 8ckb:E292, 8ckb:E301, 8ckb:E310, 8ckb:E314, 8ckb:E323, 8ckb:E332, 8ckb:E345, 8ckb:E354, 8ckb:E363, 8ckb:E369, 8ckb:E378, 8ckb:E386, 8ckb:E395, 8ckb:E404, 8ckb:E418, 8ckb:E427, 8ckb:E436, 8ckb:E440, 8ckb:E449, 8ckb:E458, 8ckb:E471, 8ckb:E480, 8ckb:E489, 8ckb:E491, 8ckb:E492, 8ckb:E493, 8ckb:E497, 8ckb:E499, 8ckb:E503, 8ckb:E505, 8ckb:E507, 8ckb:E508, 8ckb:E509, 8ckb:E512, 8ckb:E513, 8ckb:E515, 8ckb:E517, 8ckb:E530, 7qof:D, 7qoh:B, 7qoh:C, 7qoh:D, 7qoh:A, 7qoh:E, 7qoh:F, 7qoi:AB, 7qoi:AC, 7qoi:AD, 7qoi:AE, 7qoi:BB, 7qoi:BD, 7qoi:CB, 7qoi:CD, 7qoi:CE, 7qoi:CF, 7qoi:DB, 7qoi:DE, 7qoi:DF, 7qoi:EB, 7qoi:ED
44 3ieh:A 268 18 0.1111 0.0299 0.4444 7.1
45 4jcj:C 150 32 0.1528 0.0733 0.3438 9.4 4jcj:A, 4jcj:B
46 8slg:B 447 9 0.0833 0.0134 0.6667 9.9 8slf:B, 8u2q:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218