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BioLiP
>protein
GSRVKALEEKVKALEEKVKALGGGGRIEELKKKCEELKKKIEELGGGGEVKKVEEEVKKLEEEIKKL

The query sequence (length=67) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2lxy:A 67 67 1.0000 1.0000 1.0000 2.47e-33 8vsw:A
2 2pnr:B 341 33 0.1642 0.0323 0.3333 2.0
3 7jgh:A 1421 67 0.3284 0.0155 0.3284 2.2
4 6ura:A 441 42 0.1791 0.0272 0.2857 2.6 6ura:B, 6ura:C, 6ura:D
5 8y1j:A 502 41 0.2090 0.0279 0.3415 3.4 8y1j:B
6 6egl:A 36 23 0.1791 0.3333 0.5217 3.5 6egm:A, 6egn:C, 6egn:B, 6ego:A, 6egp:A, 5kb0:A, 5kb1:A, 5kb2:A, 6mcd:A, 7n2y:A, 7n2z:A
7 5uxt:A 33 26 0.2239 0.4545 0.5769 4.2 5uxt:C
8 4bkq:A 415 45 0.2239 0.0361 0.3333 4.3 4bkr:A, 5g2o:A, 5jai:A, 5jam:A, 5jaq:A, 3zu2:A, 3zu3:A, 3zu4:A, 3zu5:A
9 2pms:C 109 68 0.3284 0.2018 0.3235 4.6 2pms:D
10 7oya:E1 206 52 0.2090 0.0680 0.2692 5.3 7oyb:E1
11 1qzw:A 432 52 0.2537 0.0394 0.3269 6.1 3kl4:A, 5l3s:A, 5l3s:C, 5l3s:E, 5l3s:G, 5l3v:A, 5l3v:B, 1qzw:C, 1qzw:E, 1qzw:G, 3zn8:M
12 1y8p:A 381 20 0.1343 0.0236 0.4500 6.1 2q8i:A, 1y8n:A, 1y8o:A
13 7fap:A 1236 67 0.3284 0.0178 0.3284 6.1
14 1y8a:A 313 26 0.1791 0.0383 0.4615 7.2
15 7z0o:D 296 35 0.1642 0.0372 0.3143 7.5
16 6cng:A 281 43 0.2090 0.0498 0.3256 9.0 6cng:D
17 7nyx:A 1467 28 0.1642 0.0075 0.3929 9.3 7nyx:B, 7nyz:A, 7nyz:B, 7nz0:B, 7nz0:A, 7nz2:A3, 7nz2:B3, 7nz2:A4, 7nz2:B4, 7nz2:A1, 7nz2:B1, 7nz2:A2, 7nz2:B2, 7nz3:A1, 7nz3:B1, 7nz3:A2, 7nz3:B2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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