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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GSPLAQQIKNTLTFIGQANAAGRMDEVRTLQENLHPLWHEYFQQTEGSGGSPLAQQIEYGHVLIHQARAAGRMDEVRRLS
ENTLQLMKEYFQQSD

The query sequence (length=95) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5od9:A 95 95 1.0000 1.0000 1.0000 6.66e-68 5od1:A, 5od9:B
2 7bww:A 90 94 0.6842 0.7222 0.6915 9.16e-37 7bww:B, 7bww:C, 7bww:D, 6ypi:A
3 3v1d:A 48 46 0.3895 0.7708 0.8043 2.91e-21 3v1c:A, 3v1c:B, 3v1d:F, 3v1d:B, 3v1d:C, 3v1d:E, 3v1d:H, 3v1d:D, 3v1d:G, 3v1e:A, 3v1e:B, 3v1f:A, 3v1f:B
4 3v1d:A 48 46 0.3684 0.7292 0.7609 2.66e-18 3v1c:A, 3v1c:B, 3v1d:F, 3v1d:B, 3v1d:C, 3v1d:E, 3v1d:H, 3v1d:D, 3v1d:G, 3v1e:A, 3v1e:B, 3v1f:A, 3v1f:B
5 6a8d:A 181 17 0.1053 0.0552 0.5882 0.54
6 8d4c:C 180 17 0.0947 0.0500 0.5294 0.67 8d4c:H, 8d4c:D, 8d4c:F, 8d4d:C, 8d4d:H, 8d4d:D, 8d4d:F, 8d4e:C, 8d4e:H, 8d4e:Z, 8d4f:C, 8d4f:H, 8d4f:Z, 8d4f:D, 8d4f:F, 8d4f:Q, 8d4g:C, 8d4g:H, 8d4g:Z, 8d4g:D, 8d4g:F, 8d4g:Q, 8d9r:C, 8d9r:H, 8d9r:Z, 8d9r:J, 8d9r:X, 8d9r:3, 8d9r:K, 8d9r:a, 8d9r:4, 8d9r:O, 8d9r:b, 8d9r:5, 8d9r:P, 8d9r:c, 8d9r:6, 8d9r:Q, 8d9r:d, 8d9r:7, 8d9s:C, 8d9s:H, 8d9s:Z, 8d9s:J, 8d9s:X, 8d9s:3, 8d9s:K, 8d9s:a, 8d9s:4, 8d9s:O, 8d9s:b, 8d9s:5, 8d9s:P, 8d9s:c, 8d9s:6, 8d9s:Q, 8d9s:d, 8d9s:7, 8d9t:C, 8d9t:H, 8d9t:J, 8d9t:X, 8d9t:K, 8d9t:Z, 8d9t:O, 8d9t:a, 8d9t:P, 8d9t:b, 8d9t:Q, 8d9t:c, 8d9u:C, 8d9u:H, 8d9u:J, 8d9u:X, 8d9u:K, 8d9u:Z, 8d9u:O, 8d9u:a, 8d9u:P, 8d9u:b, 8d9u:Q, 8d9u:c, 8d9v:C, 8d9v:H, 8d9v:D, 8d9v:F, 8d9w:F, 8d9w:I, 1hur:A, 1hur:B, 7ux3:C, 7ux3:H
7 1z6x:A 175 17 0.0947 0.0514 0.5294 0.69 1z6x:B
8 5mio:C 477 48 0.1895 0.0377 0.3750 1.1 1v8j:A, 5xjb:A
9 6m4s:A 389 49 0.1579 0.0386 0.3061 1.1
10 8fmw:Q 82 39 0.0947 0.1098 0.2308 4.3
11 3o47:A 289 12 0.0842 0.0277 0.6667 6.0 4c0a:C, 4c0a:D, 4c0a:G, 4c0a:H, 6cm9:C, 6cm9:H, 6cri:C, 6cri:H, 6cri:K, 6cri:U, 6cri:L, 6cri:V, 6d83:C, 6d83:H, 6d84:C, 6d84:H, 6d84:I, 6d84:N, 6dff:C, 6dff:H, 7dn8:D, 7dn8:B, 7dn8:F, 7dn8:H, 7dn9:B, 7dn9:D, 7dn9:F, 7dn9:H, 3dwd:A, 3dwd:B, 4hmy:C, 6ii6:C, 6ii6:D, 1j2j:A, 2j59:A, 2j59:B, 2j59:C, 2j59:D, 2j59:E, 2j59:F, 7mge:E, 1o3y:A, 1o3y:B, 3o47:B, 8p50:B, 7r4h:C, 7r4h:H, 1r8q:A, 1r8q:B, 1r8s:A, 1re0:A, 1rrf:A, 1rrg:A, 1rrg:B, 1s9d:A, 8sdw:A, 1u81:A, 7wqy:A, 7wqy:B
12 5uf8:D 160 14 0.0842 0.0500 0.5714 6.1
13 3lrp:A 181 17 0.0737 0.0387 0.4118 6.3
14 8txo:J 1162 30 0.1158 0.0095 0.3667 6.4
15 8sy6:J 1269 30 0.1158 0.0087 0.3667 6.5
16 8sy7:J 1052 30 0.1158 0.0105 0.3667 6.7 8sy5:J
17 6n61:D 1239 30 0.1158 0.0089 0.3667 6.8 6n60:D, 6n62:D, 4xsx:J, 4xsy:J, 4xsz:J
18 7yp9:D 1285 30 0.1158 0.0086 0.3667 6.8
19 4jk1:D 1160 30 0.1158 0.0095 0.3667 6.8 4jk1:I, 4jk2:D, 4jk2:I, 4kmu:D, 4kmu:I, 4kn4:D, 4kn4:I, 4kn7:D, 4kn7:I, 4mex:D, 4mex:J, 4mey:D, 4mey:J, 4s20:D, 4zh3:D, 4zh4:D
20 6kj6:D 1265 30 0.1158 0.0087 0.3667 6.8
21 5ixc:A 684 26 0.0947 0.0132 0.3462 6.9 5ixc:B, 5izr:A, 5izr:B, 5izr:D
22 5ipl:D 1173 30 0.1158 0.0094 0.3667 7.0 6byu:D, 6byu:J, 6cux:D, 6cux:J, 8hkc:F, 8igr:J, 8igs:J, 4ljz:D, 4lk1:D, 6pst:J, 4s20:I, 5uac:D, 5uac:J, 5uag:D, 5uag:J, 5uah:D, 5uah:J, 5uaj:D, 5uaj:J, 5ual:D, 5ual:J, 5uaq:D, 5uaq:J, 6vjs:D, 6vjs:I, 5vsw:D, 5vsw:J, 5w1s:D, 5w1s:J, 5w1t:D, 5w1t:J, 4xsx:D, 4xsy:D, 4xsz:D, 4yfk:D, 4yfk:J, 4yfn:D, 4yfn:J, 4yfx:D, 4yfx:J, 4yg2:D, 4yg2:J, 4zh2:D
23 6awc:04 1345 30 0.1158 0.0082 0.3667 7.2 6b6h:D, 7c17:D, 8egb:J, 6flp:D, 6flq:D, 8fvr:G, 8fvw:G, 6gfw:D, 6gh5:D, 4jkr:D, 4jkr:J, 6ldi:D, 4ljz:J, 4lk0:D, 4lk0:J, 4lk1:J, 4llg:D, 4llg:J, 7m8e:D, 7mkd:J, 7mke:J, 7mki:J, 7mkj:J, 7mkq:D, 7n4e:D, 6omf:D, 6p18:D, 6p19:D, 6p1k:J, 6pb4:D, 6pb5:D, 6pb6:D, 8pbl:G, 6pmi:D, 6pmj:D, 7py3:D, 7pyj:D, 7pyk:D, 8re4:D, 8rea:D, 8reb:D, 8rec:D, 8red:D, 8ree:D, 8to6:J, 8to8:J, 8toe:J, 7ubm:D, 7ubn:D, 5ui8:J, 7uwe:J, 7uwh:J, 5vt0:J, 7vwy:D, 7vwz:D, 7w5w:D, 7w5x:D, 7w5y:D, 6xas:J, 6xav:J, 6xh7:D, 6xh8:D, 6xl5:D, 6xlj:D, 6xll:D, 6xlm:D, 6xln:D, 7xui:J, 8y6u:D, 7ypb:D, 4zh2:J, 4zh3:J, 4zh4:J, 6ztj:CD, 6ztl:CD, 6ztm:CD, 6ztn:CD, 6zto:CD, 6ztp:CD, 6zu1:CD
24 5izr:C 659 26 0.0947 0.0137 0.3462 7.3
25 5my1:Y 1372 30 0.1158 0.0080 0.3667 7.5 8aby:D, 8abz:D, 8ac0:D, 8ac1:D, 8ac2:D, 8acp:D, 7adb:Y, 7adc:Y, 7add:Y, 7ade:Y, 8ad1:D, 6alf:J, 6alg:J, 6alh:J, 6asx:J, 7bef:D, 7beg:D, 6bjs:J, 6c6s:J, 6c6t:J, 6c6u:J, 6c9y:D, 7c97:D, 6ca0:D, 7chw:D, 7d7c:D, 7d7d:D, 7dy6:D, 8e3f:B, 8e5k:B, 8e5o:B, 8e6x:B, 8e6z:B, 8eg7:J, 8eg8:J, 8eh8:J, 8eh9:J, 8eha:J, 8ehf:J, 8ehi:J, 8f1i:J, 8f1j:J, 8f1k:J, 8f3c:J, 8fix:D, 8fiy:D, 8ftd:J, 8g00:J, 8g1s:J, 8g2w:J, 8g4w:J, 8g7e:J, 8g8z:J, 6gov:Y, 5ipm:D, 5ipn:D, 3iyd:D, 6jbq:D, 6jnx:D, 8jo2:D, 6k4y:D, 8k58:D, 8k5a:D, 7khb:D, 7khc:D, 7khe:D, 7khi:D, 3lu0:D, 7mkn:D, 7mko:D, 7mkp:D, 5ms0:D, 6n4c:D, 6n57:J, 6n58:J, 5nwt:D, 6oul:J, 8pdy:J, 8pen:J, 8pfg:J, 8pfj:J, 8ph9:J, 8phk:J, 8pib:J, 8pid:J, 8pil:J, 8pim:J, 6psq:J, 6psr:J, 6pss:J, 6psu:J, 6psv:J, 6psw:J, 7py0:D, 7py1:D, 7py5:D, 7py6:D, 7py7:D, 7py8:D, 7q0j:D, 7q0k:D, 6rh3:D, 6ri7:D, 6ri9:D, 6rin:D, 6rip:D, 7szj:D, 7szk:D, 8to1:J, 8tom:J, 6tqn:Y, 6tqo:Y, 8u3b:D, 8upo:AE, 8upr:AE, 8uql:AE, 8uqm:AE, 8uqp:AE, 8ur0:AE, 8urh:AE, 8uri:AE, 8urx:AE, 8ury:AE, 6utv:DDD, 6utw:DDD, 6utx:DDD, 6uty:DDD, 6utz:DDD, 6uu0:DDD, 6uu1:DDD, 6uu2:DDD, 6uu3:DDD, 6uu4:DDD, 6uu5:DDD, 6uu6:DDD, 6uu7:DDD, 6uu8:DDD, 6uu9:DDD, 6uua:DDD, 6uub:DDD, 6uuc:DDD, 6vu3:AE, 6vyq:AE, 6vyr:AE, 6vys:AE, 6vyt:AE, 6vyu:AE, 6vyw:AE, 6vyx:AE, 6vyy:AE, 6vyz:AE, 6vz2:AE, 6vz3:AE, 6vz5:AE, 6vz7:AE, 6vzj:AE, 6wmu:D, 6x26:J, 6x2f:J, 6x2n:J, 6x43:J, 6x4w:J, 6x4y:J, 6x50:J, 6x6t:AE, 6x7f:AE, 6x7k:AE, 6x9q:AE, 6xdq:AE, 6xdr:AE, 6xgf:AE, 6xii:AE, 6xij:AE, 6xl9:D, 7xue:J, 7xug:J, 4yln:D, 4yln:J, 4yln:P, 4ylo:D, 4ylo:J, 4ylo:P, 4ylp:D, 4ylp:J, 4ylp:P, 7ypa:D, 6z9p:Y, 6z9q:Y, 6z9r:Y, 6z9s:Y, 6z9t:Y
26 2b6h:A 171 12 0.0842 0.0468 0.6667 9.1

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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