BioLiP

>protein
GSHMRHRTLSSSPALWASIPCPRSELRLDLVLASGQSFRWKEQSPAHWSGVLADQVWTLTQTEDQLYCTVYRGDDSQVSR
PTLEELETLHKYFQLDVSLAQLYSHWASVDSHFQRVAQKFQGVRLLRQDPTECLFSFICSSNNNIARITGMVERLCQAFG
PRLIQLDDVTYHGFPNLHALAGPEAETHLRKLGLGYRARYVRASAKAILEEQGGPAWLQQLRVAPYEEAHKALCTLPGVG
AKVADCICLMALDKPQAVPVDVHVWQIAHRDYGWHPKTGPSPLANKELGNFFRNLWGPYAGWAQAVLFSADL

The query sequence (length=312) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8bvx:A	316	314	0.9936	0.9810	0.9873	0.0	7ayz:AAA, 7ayz:BBB, 7ayz:CCC, 7az0:AAA, 7az0:BBB, 8bq7:A, 8cex:A, 8cey:A, 8cey:B, 8cey:C, 6g3y:A, 6g3y:B, 6g3y:C, 6g40:A, 6g40:B, 6g40:C, 7pz1:AAA, 7qel:AAA, 7qel:BBB, 7qel:CCC, 7z3y:AAA, 7z5b:A, 7z5b:B, 7z5b:C, 7z5r:A, 7z5r:B, 7z5r:C, 7zc7:A, 7zc7:B, 7zc7:C, 7zg3:A, 7zg3:B, 7zg3:C
2	2xhi:A	316	313	0.8558	0.8449	0.8530	0.0	7ayy:AAA, 7ayy:BBB, 7ayy:CCC, 7ayy:DDD, 7ayy:EEE, 1ebm:A, 1fn7:A, 1hu0:A, 2i5w:A, 3ih7:A, 3ktu:A, 1lwv:A, 1lww:A, 1lwy:A, 1m3h:A, 1m3q:A, 1n39:A, 1n3a:A, 1n3c:A, 2nob:A, 2noe:A, 2nof:A, 2noh:A, 2noi:A, 2nol:A, 2noz:A, 6rlw:AAA, 6rlw:BBB, 6rlw:CCC, 6rlw:DDD, 6rlw:EEE, 6w0m:A, 6w0r:A, 6w13:A, 1yqk:A, 1yql:A, 1yqm:A, 1yqr:A
3	4ejy:A	289	285	0.2724	0.2941	0.2982	4.47e-29	4ejy:B, 4ejz:A, 4ejz:B
4	3f10:A	292	284	0.2500	0.2671	0.2746	3.32e-27	3i0w:A, 3i0x:A
5	8a5c:A	237	62	0.0801	0.1055	0.4032	0.001	8a5f:A, 4unf:A
6	4uob:A	242	100	0.1122	0.1446	0.3500	0.002	8a5g:A
7	7yhq:A	393	59	0.0737	0.0585	0.3898	0.014
8	2abk:A	211	87	0.0737	0.1090	0.2644	0.043
9	1kea:A	217	106	0.0865	0.1244	0.2547	0.055
10	7rds:A	232	159	0.1346	0.1810	0.2642	0.10	7rdt:A
11	7yhp:A	374	57	0.0673	0.0561	0.3684	0.12	7yho:A
12	1kg5:A	225	116	0.1058	0.1467	0.2845	0.90	1kg2:A, 1kg3:A, 1kg4:A, 1kg6:A, 1kg7:A, 1kqj:A, 1mud:A, 1mun:A, 1muy:A, 1wef:A, 1weg:A, 1wei:A
13	3ogd:A	288	142	0.1186	0.1285	0.2606	1.3	3cvs:A, 3cvs:B, 3cvs:C, 3cvs:D, 3cvt:A, 3cvt:B, 3cvt:C, 3cvt:D, 3cw7:A, 3cw7:B, 3cw7:C, 3cw7:D, 3cwa:A, 3cwa:B, 3cwa:C, 3cwa:D, 3cws:A, 3cws:B, 3cws:C, 3cws:D, 3cwt:A, 3cwt:B, 3cwt:C, 3cwt:D, 3cwu:A, 3cwu:B, 3cwu:C, 3cwu:D, 3d4v:A, 3d4v:B, 3d4v:C, 3d4v:D, 1diz:B, 1diz:A, 3oh6:A, 3oh9:A, 1pvs:A, 1pvs:B
14	8wa0:B	973	39	0.0353	0.0113	0.2821	2.7	8w9z:B
15	8wa1:B	998	39	0.0353	0.0110	0.2821	2.8
16	7pg7:D	329	52	0.0609	0.0578	0.3654	2.8
17	5wgb:A	291	52	0.0577	0.0619	0.3462	3.3
18	6vaa:B	1153	47	0.0449	0.0121	0.2979	3.5
19	8h7g:K	352	86	0.0769	0.0682	0.2791	3.7
20	6bpn:A	656	30	0.0385	0.0183	0.4000	4.8
21	8a22:Bi	282	65	0.0577	0.0638	0.2769	5.4	8apn:Bi, 8apo:Bi
22	1p6v:A	125	52	0.0481	0.1200	0.2885	8.0	1p6v:C
23	6bie:B	97	38	0.0385	0.1237	0.3158	8.2	6owx:B, 5wnw:B, 5wo1:A, 5wo1:B, 5wo2:B, 5wo3:B

[Back]