Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GSFTSRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAKRLRVQHMQDHPNYKYRPRR

The query sequence (length=80) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6l6y:D 80 80 1.0000 1.0000 1.0000 2.80e-56 4a3n:A, 3f27:D, 6l6y:F
2 4y60:C 76 74 0.8250 0.8684 0.8919 2.46e-45
3 1gt0:D 79 76 0.5875 0.5949 0.6184 1.38e-34 8bx1:E, 8bx2:E, 6ht5:D, 1o4x:B, 6t90:L, 6yov:L
4 4s2q:D 76 74 0.6500 0.6842 0.7027 1.99e-34 4euw:A
5 6t78:A 77 77 0.5875 0.6104 0.6104 4.46e-33 6t78:B, 3u2b:C
6 2gzk:A 159 73 0.4875 0.2453 0.5342 1.36e-25 9bvd:C, 9bvd:F, 9bvd:I, 6cil:N, 6edb:B, 1hry:A, 1hrz:A, 1j46:A, 1j47:A, 6oem:N, 6oem:H, 6oen:N, 6oen:H, 6oeo:N, 6oer:H
7 2gzk:A 159 68 0.2125 0.1069 0.2500 0.003 9bvd:C, 9bvd:F, 9bvd:I, 6cil:N, 6edb:B, 1hry:A, 1hrz:A, 1j46:A, 1j47:A, 6oem:N, 6oem:H, 6oen:N, 6oen:H, 6oeo:N, 6oer:H
8 7m5w:A 138 70 0.3500 0.2029 0.4000 1.82e-12 6jrp:A, 6jrp:D, 6jrp:G, 6jrp:J
9 2lef:A 86 71 0.2875 0.2674 0.3239 1.41e-09
10 1j5n:A 93 54 0.2500 0.2151 0.3704 4.19e-08
11 5jh0:D 157 60 0.2375 0.1210 0.3167 1.12e-07 5jgh:A, 5jgh:D, 5jgh:G, 5jgh:J, 5jh0:A
12 5jh0:D 157 55 0.1875 0.0955 0.2727 2.36e-04 5jgh:A, 5jgh:D, 5jgh:G, 5jgh:J, 5jh0:A
13 1e7j:A 74 46 0.1625 0.1757 0.2826 1.29e-04 3nm9:D, 3nm9:G, 3nm9:J, 3nm9:P, 3nm9:M, 3nm9:A, 1qrv:A, 1qrv:B, 8r1x:A
14 6cik:N 90 38 0.1500 0.1333 0.3158 0.007 6cg0:N, 6cim:N
15 6cij:N 133 49 0.1750 0.1053 0.2857 0.026 5zdz:N, 5ze1:N, 5ze2:N
16 6hb4:A 197 49 0.1375 0.0558 0.2245 0.17 6erp:C, 6erp:G, 6erq:C, 6erq:G, 6hb4:D, 6hb4:G, 6hb4:J, 6hc3:A, 6hc3:D, 6hc3:G, 6hc3:J, 7lbw:A, 7lbw:B, 7lbx:A, 7lbx:B, 4nnu:A, 4nnu:B, 4nod:A, 4nod:B, 4nod:G, 4nod:H, 3tmm:A, 3tq6:A, 3tq6:B
17 5vsu:A 387 54 0.2750 0.0568 0.4074 0.48 6aso:A, 2kh9:A, 4n0t:A, 5tf6:A, 5tf6:C
18 6zm7:CE 124 38 0.1625 0.1048 0.3421 0.90 8k2c:CE, 8xsy:CE, 6z6l:CE, 6zme:CE
19 6yw5:EE 367 39 0.1875 0.0409 0.3846 1.7 6ywe:EE, 6ywx:EE, 6ywy:EE
20 4uun:B 337 55 0.2250 0.0534 0.3273 1.7 5a1t:A, 5a1t:B, 4uun:A
21 8e4n:A 901 51 0.1875 0.0166 0.2941 2.4 9b6j:A, 9b6j:B, 9b6j:C, 9b6j:D, 8e4l:A, 8e4l:B, 8e4l:C, 8e4l:D, 8e4m:A, 8e4m:B, 8e4m:C, 8e4m:D, 8e4n:B, 8e4n:C, 8e4n:D, 8e4o:A, 8e4o:D, 8e4o:B, 8e4o:C, 8e4p:A, 8e4p:B, 8e4p:C, 8e4p:D
22 9b6h:B 934 51 0.1875 0.0161 0.2941 2.7 9b6d:A, 9b6d:B, 9b6d:C, 9b6d:D, 9b6e:B, 9b6e:A, 9b6e:C, 9b6e:D, 9b6f:A, 9b6f:B, 9b6f:C, 9b6f:D, 9b6g:A, 9b6g:B, 9b6g:C, 9b6g:D, 9b6h:A, 9b6h:C, 9b6h:D, 9b6k:A, 9b6k:B, 9b6k:C, 9b6k:D, 7wrb:A, 7wrb:B, 7wrb:C, 7wrb:D, 7wrc:A, 7wrc:B, 7wrc:C, 7wrc:D, 7wrd:A, 7wrd:B, 7wrd:C, 7wrd:D, 7wre:A, 7wre:B, 7wre:C, 7wre:D, 7wrf:A, 7wrf:B, 7wrf:C, 7wrf:D
23 7dt1:A 846 38 0.1625 0.0154 0.3421 3.4 7dt1:B
24 8bdc:A 963 46 0.1750 0.0145 0.3043 4.6 8bdc:B, 8bdc:C, 8bdc:D
25 7bzc:A 535 37 0.1750 0.0262 0.3784 4.7 7bzb:A
26 1e6z:B 498 39 0.1750 0.0281 0.3590 4.9 7c34:A, 7c34:B, 7c92:A, 7c92:B, 7cb1:A, 7cb1:B, 1e6r:A, 1e6r:B, 1e6z:A, 1h0g:B, 1h0g:A, 1h0i:A, 1h0i:B, 6jk9:A, 6jk9:B, 6jkf:A, 6jkf:B, 1o6i:A, 1o6i:B, 1ogg:A, 1ogg:B, 1ur8:A, 1ur8:B, 1ur9:A, 1ur9:B, 1w1p:A, 1w1p:B, 1w1t:A, 1w1t:B, 1w1v:A, 1w1v:B, 1w1y:A, 1w1y:B, 3wd1:A, 3wd2:A, 3wd3:A, 3wd4:A, 4z2g:A, 4z2h:A, 4z2i:A, 4z2j:A, 4z2k:A, 4z2l:A
27 1sy7:A 698 34 0.1625 0.0186 0.3824 5.4 1sy7:B
28 5iy7:M 310 34 0.1625 0.0419 0.3824 6.4 1c9b:A, 1c9b:E, 1c9b:I, 1c9b:M, 1c9b:Q, 1dl6:A, 5iy8:M, 5iy9:M, 5iyb:M, 5iyc:M, 5iyd:M, 7nvu:M, 7nw0:M, 6o9l:M, 2phg:A, 1rly:A, 8s51:M, 8s52:M, 8s5n:M, 1vol:A, 8wak:R, 8wal:R, 8wan:R, 8wao:R, 8wap:R, 8waq:R, 8war:R, 8was:R, 7zwc:M, 7zx8:M, 7zxe:M
29 1ls5:A 328 33 0.1375 0.0335 0.3333 7.7 5i70:A, 5i70:B, 1ls5:B
30 8p1x:AAA 492 32 0.1625 0.0264 0.4062 8.1 8p20:AAA, 8p20:BBB, 8p20:CCC, 8p20:DDD, 7qd7:AAA, 7qh9:AAA, 7qh9:BBB, 7qh9:CCC, 7qh9:DDD
31 6tyg:F 147 39 0.1750 0.0952 0.3590 8.9
32 2anl:A 327 27 0.1375 0.0336 0.4074 9.1 2anl:B

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218