BioLiP

>protein
GSDPFDLKPDSISKAITDRLYHISDGKILGFIPNQYLDPESSLIEDDFLLIYVYTYELPLLSAVFVPEYNCYEIAITNVA
KFFSKIGVRSYPHSIKNSLLELKELIDNNRYDITIYKKEFTIGAAKSSKWALKDVVLRSALPTPKEVTFTENKFPLVRVS
NIVPSASSRYYTVIGLAVTVKYTGGKTLVLSFTDFTANPKVNYGYDSFLGSFQERIPENEHVHALIYLNRVESLNEKLQS
IIKMGLMECADKGNSNITHRSIIFKFTVKCQLFQGKLNTVILDADPITPTTPVTTEEYKLLKPLRNKIFKRMPSEVIQLY
TLTMSRFLPISKNRMSENPQLLQEQAFYDDSIAKLENQLKREGVDKIEEDAATRPIELFGTRNPKTVDIIDIKNNVQMDH
KDIKVTAKILSIFDNGNNVTIYLTRSGMVGTQCTIENPFEELLKVQIWGRQNLTLFFGNPNYSYKREELTACIGSIVDFT
LIPRVLRVNEYLYIKIWCPIYATLESLLIHSRLEYDNDT

The query sequence (length=519) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6lbr:A	519	519	1.0000	1.0000	1.0000	0.0	6lbr:B
2	1s40:A	187	168	0.0886	0.2460	0.2738	2.01e-19
3	6zqg:UN	108	58	0.0385	0.1852	0.3448	0.55
4	5v51:F	137	59	0.0347	0.1314	0.3051	1.1	5v51:A, 5v51:B, 5v51:D, 5v51:E, 5v51:G
5	3j9d:A	746	68	0.0366	0.0255	0.2794	2.2
6	8om3:d	144	53	0.0366	0.1319	0.3585	3.2
7	6lz8:D	112	32	0.0250	0.1161	0.4062	6.4	7dyd:D, 6kl5:C, 6kl6:D, 6lnn:D, 6lz6:D
8	5wol:A	230	51	0.0328	0.0739	0.3333	8.7
9	6lz8:B	130	32	0.0250	0.1000	0.4062	8.7	6kl5:A, 6kl6:B
10	7aqs:E	159	79	0.0482	0.1572	0.3165	9.8	3ak9:A, 3ak9:C, 3ak9:B, 3ak9:D, 3ak9:E, 3ak9:G, 3ak9:F, 3ak9:H, 3ak9:I, 3ak9:K, 3ak9:J, 3ak9:L, 7aqs:A, 7aqs:C, 7aqs:B, 7aqs:D, 7aqs:G, 7aqs:F, 7aqs:H, 7aqs:I, 7aqs:K, 7aqs:J, 7aqs:L, 7aqs:M, 7aqs:O, 7aqs:N, 7aqs:P, 7aqs:Q, 7aqs:S, 7aqs:R, 7aqs:T, 7aqs:U, 7aqs:W, 7aqs:V, 7aqs:X, 1f30:A, 1f30:B, 1f30:E, 1f30:F, 1f30:G, 1f30:H, 1f30:I, 1f30:J
11	8hc0:A	360	38	0.0250	0.0361	0.3421	9.9

[Back]