BioLiP

>protein
GRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTN
CVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMF
SYDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYG
QTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQR
LEAAGHTLIPFLPNNIPYALEVLSTGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAF
LNNMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTTV
TAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTPQK

The query sequence (length=544) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3qj9:A	549	544	0.9890	0.9800	0.9890	0.0	4do3:A, 4do3:B, 4hbp:A, 4hbp:B, 4j5p:A, 4j5p:B, 3k7f:A, 3k7f:B, 3k83:A, 3k83:B, 3k84:A, 3k84:B, 3lj6:A, 3lj6:B, 3lj7:A, 3lj7:B, 6mrg:A, 6mrg:B, 6mrg:C, 6mrg:D, 1mt5:A, 1mt5:B, 1mt5:C, 1mt5:D, 1mt5:E, 1mt5:F, 1mt5:G, 1mt5:H, 1mt5:I, 1mt5:J, 1mt5:K, 1mt5:L, 1mt5:M, 1mt5:N, 1mt5:O, 1mt5:P, 3oj8:A, 3oj8:B, 3ppm:A, 3ppm:B, 3pr0:A, 3pr0:B, 3qj9:B, 3qk5:A, 3qk5:B, 3qkv:A, 3qkv:B, 2vya:A, 2vya:B, 2wap:A, 2wap:B, 2wj1:A, 2wj1:B, 2wj2:A, 2wj2:B
2	5h6s:C	457	226	0.1176	0.1400	0.2832	9.58e-26	5h6s:A, 5h6s:B, 5h6s:D
3	3h0l:A	478	302	0.1636	0.1862	0.2947	5.05e-23	3h0l:D, 3h0l:G, 3h0l:J, 3h0l:M, 3h0l:P, 3h0l:S, 3h0l:V, 3h0m:A, 3h0m:D, 3h0m:G, 3h0m:J, 3h0m:M, 3h0m:P, 3h0m:S, 3h0m:V, 3h0r:A, 3h0r:D, 3h0r:G, 3h0r:J, 3h0r:M, 3h0r:P, 3h0r:S, 3h0r:V
4	3kfu:E	468	272	0.1728	0.2009	0.3456	1.54e-19	3kfu:H
5	6c6g:A	457	165	0.1213	0.1444	0.4000	1.31e-18	6c6g:B
6	6c6g:A	457	20	0.0221	0.0263	0.6000	0.22	6c6g:B
7	6dii:H	616	185	0.1121	0.0990	0.3297	4.16e-17	6dii:A, 6dii:B, 6dii:C, 6dii:D, 6dii:E, 6dii:F, 6dii:G, 6dii:I, 6dii:J, 6dii:K, 6dii:L, 8ey1:D, 8ey1:F, 8ey1:H, 8ey1:J, 8ey1:L, 8ey9:B, 8ey9:E, 8ey9:F, 8ey9:G, 8ey9:H, 8ey9:I
8	2dqn:A	485	207	0.1232	0.1381	0.3237	1.47e-16	2f2a:A
9	1m21:A	487	255	0.1415	0.1581	0.3020	1.51e-15	1m21:B
10	1o9o:A	412	211	0.1140	0.1505	0.2938	1.37e-11	1o9o:B, 1ocm:A, 1ocm:B
11	4yji:A	490	312	0.1599	0.1776	0.2788	2.28e-11
12	3a1i:A	508	167	0.1011	0.1083	0.3293	6.15e-11
13	3a2q:A	482	183	0.1066	0.1203	0.3169	1.16e-10
14	4n0i:A	450	212	0.1103	0.1333	0.2830	5.31e-07
15	6te4:A	564	269	0.1232	0.1188	0.2491	4.40e-05
16	4gys:B	461	138	0.0827	0.0976	0.3261	4.87e-05	4gys:A
17	3t7c:A	278	87	0.0496	0.0971	0.3103	0.88	3t7c:B, 3t7c:C, 3t7c:D
18	7mq8:NN	42	36	0.0257	0.3333	0.3889	2.3	7mq9:NN
19	7qep:D6	101	35	0.0257	0.1386	0.4000	5.1
20	8d4a:A	1207	89	0.0441	0.0199	0.2697	5.7	8d4b:A

[Back]