Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GRLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVLKDLIYRGPQSAYVKAFYQKGNKLVELMR
IISRNGDTSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFTFDYVSDHLDAIYRELTGNA
SLTKYHATPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVIS
LKNTMFEKSDALVGVYRQQQENSSKIITLDLSNY

The query sequence (length=274) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1w1w:A 274 274 1.0000 1.0000 1.0000 0.0
2 1w1w:B 327 327 1.0000 0.8379 0.8379 0.0 1w1w:C, 1w1w:D
3 6zz6:A 360 359 0.9964 0.7583 0.7604 0.0
4 8roa:A 339 339 0.5146 0.4159 0.4159 3.45e-72
5 6yuf:A 384 154 0.3248 0.2318 0.5779 1.44e-54
6 6yuf:A 384 149 0.2993 0.2135 0.5503 8.29e-42
7 6qpw:E 198 154 0.3066 0.4242 0.5455 1.61e-53
8 6qpw:A 183 143 0.3029 0.4536 0.5804 1.69e-49
9 7q2x:B 388 357 0.4161 0.2938 0.3193 5.38e-39 7q2y:B
10 7w1m:A 399 151 0.2555 0.1754 0.4636 4.97e-37 6wge:A
11 7w1m:A 399 156 0.2628 0.1805 0.4615 9.79e-29 6wge:A
12 8roa:C 364 151 0.2518 0.1896 0.4570 8.04e-37 8p0a:A, 8pq5:A, 8rob:A, 8roe:A, 8rof:A, 8rog:A
13 8roa:C 364 156 0.2628 0.1978 0.4615 7.54e-29 8p0a:A, 8pq5:A, 8rob:A, 8roe:A, 8rof:A, 8rog:A
14 5h68:B 332 330 0.3723 0.3072 0.3091 1.60e-36 5h68:A
15 6wg3:A 561 151 0.2518 0.1230 0.4570 1.54e-35 6wg6:A, 6wg6:C
16 6wg3:A 561 156 0.2628 0.1283 0.4615 3.27e-28 6wg6:A, 6wg6:C
17 7qen:B 419 150 0.2263 0.1480 0.4133 5.12e-28
18 7qen:B 419 155 0.2044 0.1337 0.3613 1.56e-17
19 5xg3:B 374 215 0.2701 0.1979 0.3442 1.22e-25 5h67:A, 5xg3:A
20 5xg3:B 374 152 0.1569 0.1150 0.2829 5.34e-07 5h67:A, 5xg3:A
21 8p0a:B 314 300 0.3102 0.2707 0.2833 4.75e-24
22 3kta:B 171 147 0.1934 0.3099 0.3605 2.66e-23
23 7q2x:A 431 90 0.1241 0.0789 0.3778 2.12e-13 7q2y:A
24 7q2x:A 431 156 0.1679 0.1067 0.2949 4.40e-11 7q2y:A
25 7qen:A 465 90 0.1204 0.0710 0.3667 7.06e-13
26 7qen:A 465 156 0.1679 0.0989 0.2949 4.42e-11
27 8rok:A 381 144 0.1460 0.1050 0.2778 2.83e-12 8pq5:B
28 8rok:A 381 225 0.2153 0.1549 0.2622 2.08e-05 8pq5:B
29 7w1m:B 528 146 0.1496 0.0777 0.2808 4.89e-12
30 7w1m:B 528 143 0.1642 0.0852 0.3147 2.57e-05
31 6wge:B 490 146 0.1460 0.0816 0.2740 1.22e-11
32 6wge:B 490 143 0.1642 0.0918 0.3147 2.39e-05
33 8rol:A 411 147 0.1460 0.0973 0.2721 1.29e-11 8roi:A, 8roj:A, 8rok:C
34 8rol:A 411 143 0.1642 0.1095 0.3147 2.37e-05 8roi:A, 8roj:A, 8rok:C
35 6wg3:B 693 146 0.1460 0.0577 0.2740 1.55e-11
36 6wg3:B 693 143 0.1642 0.0649 0.3147 2.15e-05
37 4ux3:A 436 121 0.1387 0.0872 0.3140 1.88e-11
38 4ux3:A 436 43 0.0730 0.0459 0.4651 0.007
39 6qpw:C 377 116 0.1350 0.0981 0.3190 1.01e-10
40 6qpw:C 377 42 0.0730 0.0531 0.4762 0.008
41 1xex:A 166 164 0.2044 0.3373 0.3415 2.47e-10 3kta:A, 3kta:C
42 6yuf:C 456 76 0.1131 0.0680 0.4079 4.65e-10
43 6yuf:C 456 138 0.1606 0.0965 0.3188 1.76e-05
44 6zz6:B 423 126 0.1423 0.0922 0.3095 5.48e-10
45 6zz6:B 423 42 0.0730 0.0473 0.4762 0.009
46 7tve:D 445 104 0.1314 0.0809 0.3462 3.27e-04
47 7tve:D 445 72 0.0839 0.0517 0.3194 0.017
48 7yzp:C 448 53 0.0693 0.0424 0.3585 7.39e-04 7yzp:D
49 6s85:D 375 53 0.0693 0.0507 0.3585 0.001 6s6v:C, 6s6v:D, 6s85:C, 7yzo:C, 7yzo:D, 7z03:D, 7z03:C
50 3qf7:A 357 140 0.1496 0.1148 0.2929 0.001 3qf7:B, 3tho:A, 4w9m:C, 4w9m:I, 4w9m:E, 4w9m:K
51 3qf7:A 357 51 0.0620 0.0476 0.3333 7.6 3qf7:B, 3tho:A, 4w9m:C, 4w9m:I, 4w9m:E, 4w9m:K
52 7tve:E 461 61 0.0693 0.0412 0.3115 0.001
53 7tve:E 461 188 0.1825 0.1085 0.2660 0.092
54 5eg1:B 576 72 0.0949 0.0451 0.3611 0.004 5eg1:A, 5ofr:A, 5ofr:B, 4pl0:A, 4pl0:B, 8px9:A, 8px9:B
55 8dk3:A 455 127 0.1204 0.0725 0.2598 0.008 8dk3:B
56 8dk2:C 723 127 0.1204 0.0456 0.2598 0.011 8dk2:D
57 7nhk:0 495 61 0.0766 0.0424 0.3443 0.012
58 8q72:A 750 47 0.0584 0.0213 0.3404 0.015 8q72:B, 8q72:F, 8q72:G
59 3auy:A 366 66 0.0876 0.0656 0.3636 0.015 3aux:A, 3auy:B, 3av0:B, 5dny:D, 5dny:B, 5f3w:D, 5f3w:B
60 3auy:A 366 90 0.0912 0.0683 0.2778 2.4 3aux:A, 3auy:B, 3av0:B, 5dny:D, 5dny:B, 5f3w:D, 5f3w:B
61 2d2f:A 246 147 0.1533 0.1707 0.2857 0.016
62 8as8:A 597 47 0.0584 0.0268 0.3404 0.021 8as8:B, 8bfn:A, 8bfn:B, 8bfn:F, 8bfn:G
63 8ee7:A 456 48 0.0584 0.0351 0.3333 0.032 8ee4:A, 8ee4:B, 8ee4:C, 8ee4:D, 8ee4:E, 8ee4:F, 8ee7:B, 8eea:A, 8eea:B, 8eea:C, 8eea:D, 8eea:E, 8eea:F, 8sux:A, 8sux:B, 8sux:C, 8sux:D, 8sux:E, 8sux:F
64 3qkt:B 319 322 0.3029 0.2602 0.2578 0.039 4ncj:A, 4ncj:B, 3qkt:D, 3qku:B
65 1g6h:A 254 38 0.0584 0.0630 0.4211 0.055 1g9x:A, 1g9x:B, 1g9x:C
66 8z9x:B 567 75 0.0803 0.0388 0.2933 0.071 8z9x:A
67 1f3o:A 232 25 0.0474 0.0560 0.5200 0.17 1l2t:A, 1l2t:B, 3tif:A, 3tif:B
68 5xu1:B 226 25 0.0438 0.0531 0.4800 0.17 5xu1:A
69 8z0f:A 549 75 0.0766 0.0383 0.2800 0.19 8z0f:B
70 5y0t:A 414 89 0.0985 0.0652 0.3034 0.19 5y0t:B, 5y0t:C, 5y0t:D
71 7o80:Bz 595 65 0.0803 0.0370 0.3385 0.20 7a09:J, 6hcf:k1, 6hcm:k1, 3jag:jj, 3jah:jj, 3jai:jj, 5lzv:jj, 8p03:k, 8p09:k, 8scb:jj, 6yal:k, 6yam:k, 6zme:CI, 6zvj:1
72 8buu:9 573 73 0.0730 0.0349 0.2740 0.24
73 3qku:A 359 44 0.0730 0.0557 0.4545 0.28 1f2u:A, 1f2u:D, 1f2u:C, 1f2u:B, 3qks:A, 3qks:B
74 3qku:A 359 92 0.0912 0.0696 0.2717 0.88 1f2u:A, 1f2u:D, 1f2u:C, 1f2u:B, 3qks:A, 3qks:B
75 3qkt:A 339 44 0.0730 0.0590 0.4545 0.30 4ncj:C, 4ncj:D, 3qkt:C
76 3qkt:A 339 92 0.0912 0.0737 0.2717 0.79 4ncj:C, 4ncj:D, 3qkt:C
77 8ipr:A 504 44 0.0547 0.0298 0.3409 0.40 8ipr:D
78 5d3m:A 280 226 0.1971 0.1929 0.2389 0.48 8bmp:A, 8bmq:A, 8bms:A, 5d3m:E
79 6ha8:V 541 48 0.0730 0.0370 0.4167 0.64
80 7ph3:A 577 79 0.0876 0.0416 0.3038 0.75 3b5y:A, 3b5y:C, 3b60:A, 3b60:B, 3b60:C, 3b60:D, 7bcw:A, 7bcw:B, 6bpl:A, 6bpl:B, 6bpp:A, 6bpp:B, 8dmm:A, 8dmm:B, 7mew:A, 7mew:B, 7ph2:A, 7ph2:B, 7ph3:B, 7ph4:A, 7ph4:B, 7ph7:A, 7ph7:B, 7sel:A, 7sel:B, 8tso:A, 8tso:B
81 6tej:B 585 215 0.1788 0.0838 0.2279 0.86
82 4zas:A 369 26 0.0365 0.0271 0.3846 0.92 4zas:B, 4zas:D, 4zas:E, 4zas:F
83 8i3a:A 562 31 0.0438 0.0214 0.3871 1.2 8i39:A, 8i39:B, 8i3a:B, 8i3b:A, 8i3b:B, 8i3c:A, 8i3c:B, 8iwn:A, 8iwn:C, 8wam:A, 8wam:B, 8wba:A, 8wba:B
84 4ymu:J 240 236 0.2117 0.2417 0.2458 1.4 4ymu:A, 4ymv:J, 4ymv:A
85 7zoa:B 570 59 0.0730 0.0351 0.3390 1.4 7znu:A, 7znu:B, 7zo9:A, 7zo9:B, 7zoa:A
86 7cte:D 406 21 0.0438 0.0296 0.5714 1.6 7ctf:D, 7ctg:D, 7jpo:D, 7jpp:D, 7jpq:D, 7jpr:D, 7jps:D, 5uj7:C, 5uj7:D, 5ujm:D
87 7jgr:D 441 23 0.0365 0.0227 0.4348 1.6 7jgs:D, 7jk2:D, 7jk3:D, 7jk4:D, 7jk5:D, 7jk6:D
88 8adl:A 633 125 0.0985 0.0427 0.2160 1.7 8adl:I
89 6gqi:A 529 44 0.0693 0.0359 0.4318 2.4 6gqi:B, 5m0z:A, 5m10:A, 7v8o:A, 7v8o:B, 7v8r:A, 7v8s:A, 7v8s:B
90 3bk7:A 593 66 0.0693 0.0320 0.2879 2.8 3j15:B, 5lw7:B, 1yqt:A, 5yv5:A
91 2iw3:B 980 17 0.0401 0.0112 0.6471 3.4 7b7d:EF, 2iw3:A, 2iwh:A, 2iwh:B
92 2iw3:B 980 40 0.0474 0.0133 0.3250 4.3 7b7d:EF, 2iw3:A, 2iwh:A, 2iwh:B
93 5l22:B 540 19 0.0401 0.0204 0.5789 4.3 5l22:A
94 4nj5:A 482 41 0.0438 0.0249 0.2927 4.6
95 6s47:Bi 952 69 0.0693 0.0200 0.2754 5.0
96 4pnf:B 221 55 0.0584 0.0724 0.2909 6.1 4pnf:A, 4pnf:C, 4pnf:D, 4pnf:E, 4pnf:F, 4pnf:G, 4pnf:H, 4yh2:A, 4yh2:B, 4yh2:C, 4yh2:D
97 2pcl:A 223 29 0.0474 0.0583 0.4483 6.4
98 7r8e:A 548 25 0.0328 0.0164 0.3600 6.5 7fdv:A, 7fdv:D, 7oz1:A, 7oz1:B, 7r8d:A, 7r8d:B, 7r8e:B
99 2hyd:A 578 37 0.0547 0.0260 0.4054 7.1 2hyd:B, 2onj:A, 2onj:B
100 8wy4:A 451 38 0.0511 0.0310 0.3684 7.8 8wy4:B, 8wy4:D, 8wy4:C, 8wy5:A, 8wy5:B, 8wy5:C, 8wy5:D, 8x51:A, 8x51:B
101 8ce5:a 203 96 0.0912 0.1232 0.2604 8.2 8ce5:A, 7f02:A, 7f02:E, 7f03:A, 7f03:E, 7f04:A, 7f04:E, 7vfp:E
102 8dku:A 395 20 0.0365 0.0253 0.5000 8.5 8dky:A, 8dky:B, 8dn8:A, 8dn8:C, 8dnc:A, 8dne:A, 8dne:C, 8dou:A, 8dou:C, 7k2t:A, 7k2t:C, 6m96:A
103 6djw:A 317 47 0.0620 0.0536 0.3617 8.6 6djx:A
104 8hf4:A 563 74 0.0766 0.0373 0.2838 8.6 8hf4:B, 8hf5:A, 8hf5:B, 8hf6:A, 8hf6:B, 8hf7:B, 8k4b:A, 8k4b:B, 8k7a:A, 8k7a:B
105 8x5i:A 477 38 0.0511 0.0294 0.3684 9.0 8x5i:C, 8x5n:A, 8x5n:D, 8x5n:B, 8x5n:C
106 7nyw:A 685 56 0.0730 0.0292 0.3571 9.1
107 2xnj:A 255 52 0.0547 0.0588 0.2885 9.7 1fdr:A, 2xnj:B
108 3j5s:D 554 47 0.0620 0.0307 0.3617 9.9

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218