BioLiP

>protein
GRDSLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGA
KRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDL
RDTGIFLDLMHLKKPGGFDISLFYRDIISVHFEESSKLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKAL
KPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYL
RPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADD
KRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLV
DEFKELVYPPDY

The query sequence (length=492) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	8bh3:B	507	501	1.0000	0.9704	0.9820	0.0	8asc:A, 8asc:E, 8asc:K, 8asc:O, 8bh3:T, 8bhv:a, 8bhv:h, 8bhy:B, 8bhy:T, 8bot:G, 8bot:T, 6erf:A, 6erf:G, 6erg:A, 6erg:D, 6erh:A, 6erh:C, 8eza:A, 8eza:J, 8ezb:A, 8ezb:J, 1jey:A, 7k1j:B, 7lsy:A, 7lsy:J, 7lt3:A, 7lt3:J, 7nfc:B, 7nfc:G, 7sgl:B, 7su3:B, 5y3r:A, 7z6o:A, 7z87:B, 7z88:B, 6zha:B, 6zhe:G, 6zhe:B, 7zvt:A, 7zwa:A, 7zyg:A
2	7nfe:B	475	493	0.9593	0.9937	0.9574	0.0	8bot:B
3	5y58:A	548	509	0.2175	0.1953	0.2102	9.36e-07	5y58:E, 5y58:C
4	5y58:B	568	110	0.0671	0.0581	0.3000	0.027	5y58:D, 5y58:F, 5y59:B
5	6tyw:A	218	81	0.0407	0.0917	0.2469	1.0	6tyt:A, 6tyu:A, 6tyv:A, 6tyx:A, 6tyx:B, 6tyz:A
6	6cnb:B	1114	40	0.0366	0.0162	0.4500	5.8	8bws:B, 6cnc:B, 6cnd:B, 6cnf:B, 6eu0:B, 6eu1:B, 6f40:B, 6f41:B, 6f42:B, 6f44:B, 5fj8:B, 5fja:B, 6tut:B, 7z0h:B, 7z1l:B, 7z1m:B, 7z1n:B, 7z1o:B, 7z2z:B, 7z30:B, 7z31:B
7	3jb6:A	1196	98	0.0589	0.0242	0.2959	7.5	5h0r:F, 6ty8:A
8	6k32:A	1208	98	0.0589	0.0240	0.2959	7.6	3jb7:A, 6ty9:A, 6tz1:A, 6tz2:A
9	1fay:A	236	75	0.0467	0.0975	0.3067	7.7	1f9k:A, 1f9k:B, 1fay:B, 1fay:C, 1fay:D, 1fay:E, 1fay:F, 1fay:G, 1fay:H
10	5txe:A	652	27	0.0264	0.0199	0.4815	8.7	5txe:B

[Back]