BioLiP

>protein
GNVVAILGAQWGDEGKGKIIDMLSEYSDITCRFNGGANAGHTISVNDKKYALHLLPCGVLYDNNISVLGNGMVIHVKSLM
EEIESVGGKLLDRLYLSNKAHILFDIHQIIDSIQETKKLKEGKQIGTTKRGIGPCYSTKASRIGIRLGTLKNFENFKNMY
SKLIDHLMDLYNITEYDKEKELNLFYNYHIKLRDRIVDVISFMNTNLENNKKVLIEGANAAMLDIDFGTYPYVTSSCTTV
GGVFSGLGIHHKKLNLVVGVVKSYLTRVGCGPFLTELNNDVGQYLREKGHEYGTTTKRPRRCGWLDIPMLLYVKCINSID
MINLTKLDVLSGLEEILLCVNFKNKKTGELLEKGCYPVEEEISEEYEPVYEKFSGWKEDISTCNEFDELPENAKKYILAI
EKYLKTPIVWIGVGPNRKNMIVKK

The query sequence (length=424) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	1p9b:A	424	424	1.0000	1.0000	1.0000	0.0
2	1dj3:A	432	429	0.4575	0.4491	0.4522	4.76e-127	1dj3:B
3	2dgn:A	431	427	0.4458	0.4385	0.4426	9.44e-126	1iwe:A, 1iwe:B, 1lny:A, 1lny:B, 1lon:A, 1loo:A, 1mez:A, 1mf0:A, 1mf1:A
4	5i34:A	429	430	0.4670	0.4615	0.4605	1.15e-125	5i34:B
5	1dj2:A	429	429	0.4552	0.4499	0.4499	1.43e-122	1dj2:B
6	2v40:A	419	427	0.4528	0.4582	0.4496	5.11e-121
7	4m9d:B	431	420	0.4033	0.3968	0.4071	7.36e-105	4m9d:A
8	1cg0:A	431	429	0.4033	0.3968	0.3986	8.38e-105	1cg1:A, 1cg3:A, 1cg4:A, 1ch8:A, 1cib:A, 2gcq:A, 1gim:A, 1gin:A, 1hon:A, 1hoo:A, 1juy:A, 1kjx:A, 1kkb:A, 1kkf:A, 1ksz:A, 1nht:A, 1qf4:A, 1qf5:A, 1son:A, 1soo:A
9	6jrq:A	407	420	0.3915	0.4079	0.3952	1.52e-101	6jrq:B, 6jrq:C, 6jrq:D
10	9f17:A	413	419	0.4009	0.4116	0.4057	2.53e-101	9f17:B, 7pvo:A, 8qwa:A, 6zxq:A
11	6c25:A	394	431	0.3373	0.3629	0.3318	3.18e-77
12	5k7x:A	337	424	0.2736	0.3442	0.2736	2.75e-43	5k7x:B, 5k7x:C, 5k7x:D, 5k7x:E, 5k7x:F
13	7vf6:A	366	352	0.1887	0.2186	0.2273	8.42e-13	7vf6:B
14	7odx:A	350	361	0.2075	0.2514	0.2438	6.82e-11
15	6tnh:A	345	271	0.1698	0.2087	0.2657	7.75e-11	6fko:A, 6fko:B, 6fm1:A, 6fm1:B, 6rm2:A, 6rm2:B, 6tnh:B
16	6fm3:A	304	275	0.1627	0.2270	0.2509	2.11e-08	6fm0:A, 6fm0:B
17	4p0q:B	284	148	0.0708	0.1056	0.2027	0.18	4p0r:B, 4p0r:D, 4p0s:B, 4p0s:H, 4p0s:F, 4p0s:D
18	4z7x:A	211	69	0.0495	0.0995	0.3043	2.2	4z7x:B
19	7qep:S8	164	103	0.0613	0.1585	0.2524	2.3
20	5yzg:y	112	64	0.0425	0.1607	0.2812	3.5	8i0w:z
21	1aye:A	401	90	0.0495	0.0524	0.2333	4.6	1dtd:A
22	1keq:A	238	38	0.0401	0.0714	0.4474	4.8	1dmx:A, 1dmx:B, 1dmy:A, 1dmy:B, 1keq:B, 1urt:A
23	7w15:A	294	77	0.0425	0.0612	0.2338	4.9	7w15:B, 7w19:A, 7w19:B, 7w1a:B, 7w1a:A
24	4zm4:B	425	93	0.0684	0.0682	0.3118	4.9	4zm3:A, 4zm3:B, 4zm3:C, 4zm3:D, 4zm4:A, 4zm4:C, 4zm4:E, 4zm4:F
25	7d4i:RP	2084	62	0.0472	0.0096	0.3226	5.7	7d5t:RP
26	4v59:D	1467	112	0.0825	0.0239	0.3125	6.5	4v59:A, 4v59:B, 4v59:C, 4v59:E, 4v59:F
27	4itu:A	253	72	0.0495	0.0830	0.2917	10.0	4gh5:A, 4gh5:B, 4gh5:C, 4gh5:D, 4itu:B, 4itu:C, 4itu:D

[Back]