BioLiP

>protein
GMTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTDMTGAIVDMTLAKVKTATIRYG
AGSHPMTLEELCALYVDSHVNFRCEIKPGVDGLPYEGFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLV
SPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGLMAQVQAAGLDFGCWAAHTPSQITKALDLGVKVFTTDRPTLAIAL
RTEHRMEAS

The query sequence (length=249) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3ks6:A	250	249	1.0000	0.9960	1.0000	0.0	3ks5:A, 3ks5:B, 3ks6:B, 3ks6:C, 3ks6:D
2	2pz0:B	243	243	0.2610	0.2675	0.2675	1.89e-16	2pz0:A
3	4oec:A	248	87	0.1245	0.1250	0.3563	1.34e-09	4oec:B, 4oec:C, 4oec:D
4	5t9c:E	263	140	0.1687	0.1597	0.3000	1.98e-08	5t91:A, 5t9b:G
5	2oog:D	268	195	0.2088	0.1940	0.2667	3.74e-07	2oog:A, 2oog:B, 2oog:C, 2oog:E, 2oog:F
6	4r7o:C	280	151	0.1647	0.1464	0.2715	5.99e-07	4r7o:A, 4r7o:B, 4r7o:D, 4r7o:E, 4r7o:F, 4r7o:G
7	3l12:A	297	274	0.3052	0.2559	0.2774	1.04e-06	3l12:B
8	8ghh:A	276	151	0.1566	0.1413	0.2583	1.23e-06	8ghi:A
9	3qvq:A	251	245	0.2369	0.2351	0.2408	2.88e-06	3qvq:B, 3qvq:C, 3qvq:D
10	7ym0:A	301	66	0.0924	0.0764	0.3485	4.07e-05	7ym0:B, 7ymr:A, 7ymr:B, 7ymr:C, 7ymr:D
11	7e2b:A	253	90	0.0964	0.0949	0.2667	4.50e-05
12	3no3:A	238	241	0.2169	0.2269	0.2241	7.11e-05
13	5vug:A	268	112	0.1124	0.1045	0.2500	0.19
14	7ww4:A	480	238	0.2048	0.1062	0.2143	0.73	7wwc:A
15	8cwp:A	327	82	0.0924	0.0703	0.2805	0.76
16	5gjo:A	385	102	0.1084	0.0701	0.2647	0.94	5gjn:A, 5gjo:B, 5gjp:A
17	6jij:C	298	51	0.0683	0.0570	0.3333	1.1	6jij:B, 6jij:A
18	6kfs:A	248	62	0.0763	0.0766	0.3065	1.8
19	6ik5:A	705	32	0.0442	0.0156	0.3438	4.4	6ik5:B, 6ik6:A, 6ik6:B, 6ik7:B, 6ik7:A, 6ik8:B, 6ik8:A, 3w5f:A, 3w5g:A, 3w5g:B
20	5dw8:A	260	36	0.0562	0.0538	0.3889	5.3	5dw8:B, 5j16:A, 5j16:B, 5j16:C, 5j16:D
21	9eoc:B	485	58	0.0884	0.0454	0.3793	5.6
22	3d23:B	301	39	0.0562	0.0465	0.3590	5.6	3d23:A, 3d23:C, 3d23:D
23	4i58:A	451	28	0.0562	0.0310	0.5000	5.7	4i58:B, 4i58:C, 4i58:D, 4i59:A, 4i59:B, 4i59:C, 4i59:D
24	1t8q:B	329	90	0.0964	0.0729	0.2667	6.1	1t8q:A, 1t8q:C, 1t8q:D, 1ydy:A, 1ydy:B
25	5u8u:D	477	56	0.0843	0.0440	0.3750	6.9	1lpf:A, 1lpf:B, 5u8u:A, 5u8u:B, 5u8u:C, 5u8v:A, 5u8v:B, 5u8v:C, 5u8v:D, 5u8w:A, 5u8w:B, 5u8w:C, 5u8w:D
26	1rv8:B	305	37	0.0522	0.0426	0.3514	8.1	1rv8:A, 1rv8:C, 1rv8:D, 1rvg:A, 1rvg:B, 1rvg:C, 1rvg:D
27	8tjg:A	250	28	0.0522	0.0520	0.4643	8.4

[Back]