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BioLiP
>protein
GMSLANQIDQFLGTIMQFAENKHEILLGKSESDVKLTSTQEHILMLLAEQISTNAKIAEKLKISPAAVTKALKKLQEQEL
IKSSRATNDERVVLWSLTEKAVPVAKEHATHHEKTLSTYQELGNKFTDEEQEVISKFLSALTEEFQ

The query sequence (length=146) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5yhx:N 146 146 0.9932 0.9932 0.9932 8.72e-103 5yhx:A, 5yhx:B, 5yhx:G, 5yhx:H, 5yhx:M, 5yhx:S, 5yhx:T, 5yhy:A, 5yhz:A, 5yi0:B, 5yi0:A, 5yi0:C, 5yi0:D, 5yi2:A, 5yi2:B, 5yi2:E, 5yi2:F, 5yi2:I, 5yi2:J, 5yi2:M, 5yi2:N, 5yi3:A, 5yi3:B, 5yi3:E, 5yi3:F, 5yi3:I, 5yi3:J, 5yi3:M, 5yi3:N
2 6fi9:A 144 144 0.8493 0.8611 0.8611 4.14e-89 6fi9:B, 6fi9:C, 6fi9:D, 6fi9:E, 6fi9:F, 6fi9:G, 6fi9:H
3 3tgn:B 146 143 0.4726 0.4726 0.4825 2.95e-38 3tgn:A
4 5jlu:A 137 144 0.4384 0.4672 0.4444 4.28e-36 5jls:A
5 4xrf:A 142 85 0.1781 0.1831 0.3059 7.60e-06
6 1z9c:C 138 109 0.2534 0.2681 0.3394 1.31e-05 1z9c:A, 1z9c:B, 1z9c:D, 1z9c:E, 1z9c:F
7 7el3:A 138 113 0.2192 0.2319 0.2832 1.71e-05 7el3:B
8 4kdp:A 151 122 0.2055 0.1987 0.2459 3.92e-04 4ejv:A, 4ejv:B, 4ejw:A, 4ejw:B, 4kdp:B, 4kdp:C, 4kdp:D, 3kp2:A, 3kp2:B, 3kp3:B, 3kp4:A, 3kp4:B, 3kp5:A, 3kp5:B
9 6jbx:A 146 91 0.1575 0.1575 0.2527 0.002 6jbx:B
10 3hru:A 211 35 0.1164 0.0806 0.4857 0.048 3hru:B
11 8pw0:A 137 51 0.1438 0.1533 0.4118 0.066
12 7l1i:A 169 112 0.1986 0.1716 0.2589 0.21
13 5hli:A 146 59 0.1164 0.1164 0.2881 0.36 5hlg:A, 5hlg:B, 5hlg:C, 5hlg:D, 5hlg:E, 5hlg:F, 5hlg:G, 5hlg:H, 5hlh:A, 5hlh:B, 5hlh:C, 5hlh:D, 5hlh:E, 5hlh:F, 5hlh:G, 5hlh:H, 5hli:B
14 3ech:B 135 115 0.1918 0.2074 0.2435 0.36 3ech:A
15 2xkb:C 389 40 0.1301 0.0488 0.4750 0.38 2xkb:L
16 9c4d:E 140 42 0.1096 0.1143 0.3810 0.38 9c4c:E, 9c4c:F, 9c4c:G, 9c4c:H, 9c4d:F, 9c4d:G, 9c4d:I, 9c4d:D, 9c4d:H, 9c4d:J, 9c4d:C, 2ev0:A, 2ev0:B, 2ev5:A, 2ev5:B, 2ev6:A, 2ev6:B, 2f5c:A, 2f5d:A, 2f5d:B, 2f5e:A, 2f5e:B, 2f5f:A, 2f5f:B, 4hv5:A, 4hv5:B, 4hv6:A, 4hv6:B, 4hx4:A, 4hx4:B, 1on1:A, 1on1:B, 1on2:A, 1on2:B, 3r60:A, 3r60:B, 3r61:A, 3r61:B
17 6c2s:A 142 91 0.1849 0.1901 0.2967 0.79 6c28:A, 6c28:D, 6c28:B, 6c28:C, 6c2s:D, 6c2s:B, 6c2s:C
18 7r81:a2 71 60 0.1301 0.2676 0.3167 0.82 7olc:SZ, 7old:SZ, 8oo0:SZ, 7z3n:SZ, 7z3o:SZ
19 6ktb:B 138 46 0.1027 0.1087 0.3261 1.0
20 3q5f:A 141 89 0.1575 0.1631 0.2584 1.4 3q5f:B
21 3lgd:A 482 57 0.0959 0.0290 0.2456 1.8 3lgd:B, 3lgg:A, 3lgg:B
22 3j4s:A 414 23 0.1027 0.0362 0.6522 1.8 3m89:A, 2xka:A, 2xka:B, 2xka:C, 2xka:D, 2xka:E, 2xka:F, 2xka:G, 2xkb:A, 2xkb:B, 2xkb:D, 2xkb:E, 2xkb:F, 2xkb:G, 2xkb:I, 2xkb:J, 2xkb:K
23 4aij:B 142 86 0.1438 0.1479 0.2442 2.1 4aij:A, 4aik:A
24 7ase:a 70 33 0.0959 0.2000 0.4242 2.3 5opt:a
25 6o5c:A 215 34 0.0890 0.0605 0.3824 2.5 6o5c:B
26 3zpl:E 160 119 0.1575 0.1437 0.1933 3.1 3zpl:A, 3zpl:B, 3zpl:F
27 5cvi:B 215 33 0.1027 0.0698 0.4545 3.2 5cvi:A
28 3gfi:A 143 84 0.1712 0.1748 0.2976 3.5 3gez:A, 3gfj:A, 3gfl:A, 3gfm:A, 2yr2:B
29 2p5v:G 158 30 0.0548 0.0506 0.2667 4.3 2p5v:A, 2p5v:B, 2p5v:C, 2p5v:E, 2p5v:D, 2p5v:F, 2p5v:H, 2p6s:A, 2p6s:G, 2p6s:B, 2p6s:D, 2p6s:C, 2p6s:F, 2p6s:E, 2p6s:H, 2p6t:A, 2p6t:G, 2p6t:B, 2p6t:D, 2p6t:C, 2p6t:F, 2p6t:E, 2p6t:H
30 8iyk:L 232 30 0.0890 0.0560 0.4333 4.8 8iyk:N, 8iyk:f, 8iyl:L, 8iyl:G, 8iyl:d, 8k35:J, 8k35:G, 8k35:N, 8xcg:L, 8xcg:N, 8xcg:f
31 5ffj:A 1044 43 0.0959 0.0134 0.3256 4.8
32 5ffj:B 1232 43 0.0959 0.0114 0.3256 4.9
33 1elr:A 128 35 0.0753 0.0859 0.3143 5.5 3esk:A, 3fwv:A, 3fwv:B
34 2x4h:C 131 27 0.0753 0.0840 0.4074 6.9 2x4h:A, 2x4h:B, 2x4h:D
35 5xxu:Z 71 60 0.1027 0.2113 0.2500 7.0
36 4y9j:B 593 55 0.1575 0.0388 0.4182 7.1 4y9j:A, 4y9l:A, 4y9l:B
37 6ms8:G 209 32 0.0822 0.0574 0.3750 9.5 6ms8:A, 6ms8:D, 6ms8:E, 6ms8:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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