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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELA
YGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWIT
NGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVA
MGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYY
ASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKYKN

The query sequence (length=388) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2a1t:C 388 388 1.0000 1.0000 1.0000 0.0 2a1t:A, 2a1t:B, 2a1t:D, 1egc:A, 1egc:B, 1egc:C, 1egc:D, 1egd:A, 1egd:B, 1egd:C, 1egd:D, 1ege:A, 1ege:B, 1ege:C, 1ege:D, 4p13:A, 4p13:B, 4p13:C, 4p13:D, 8sgp:A, 8sgp:B, 8sgp:C, 8sgp:D, 1t9g:A, 1t9g:B, 1t9g:C, 1t9g:D
2 3mdd:A 385 385 0.8866 0.8935 0.8935 0.0 3mdd:B, 3mde:A, 3mde:B, 1udy:A, 1udy:B, 1udy:C, 1udy:D
3 1ukw:A 379 380 0.4768 0.4881 0.4868 1.32e-128 1ukw:B
4 7w0j:E 382 374 0.3892 0.3953 0.4037 5.84e-98 8i4p:A, 8i4r:A, 7w0j:B, 7w0j:C, 7w0j:H
5 3pfd:C 369 361 0.3763 0.3957 0.4044 1.06e-93 3pfd:A, 3pfd:B, 3pfd:D
6 4l1f:A 380 376 0.3969 0.4053 0.4096 1.33e-89 4l1f:B
7 5ol2:F 378 360 0.3943 0.4048 0.4250 3.65e-89 5ol2:C
8 7y0a:C 387 385 0.3840 0.3850 0.3870 6.90e-87 1jqi:A, 1jqi:B, 8sgs:A, 8sgs:B, 8sgs:C, 8sgs:D, 2vig:A, 2vig:B, 2vig:C, 2vig:D, 2vig:E, 2vig:F, 2vig:G, 2vig:H, 7y0a:A, 7y0a:B, 7y0a:D, 7y0b:A, 7y0b:B, 7y0b:C, 7y0b:D
9 7p9a:A 380 376 0.3866 0.3947 0.3989 9.09e-87 7p98:A, 7p98:B, 7p9a:B, 7p9x:A, 7p9x:B, 7p9x:C, 7p9x:D
10 5lnx:D 374 377 0.3866 0.4011 0.3979 4.18e-86 5lnx:A, 5lnx:B, 5lnx:C, 5lnx:E, 5lnx:F, 5lnx:G, 5lnx:H
11 4n5f:A 378 375 0.3686 0.3783 0.3813 5.81e-84 4n5f:B
12 1buc:A 383 377 0.4021 0.4073 0.4138 1.26e-81 1buc:B
13 6fah:D 379 375 0.3686 0.3773 0.3813 2.83e-80 6fah:C
14 2dvl:A 370 375 0.3943 0.4135 0.4080 8.45e-80 2dvl:B
15 2jif:A 381 378 0.3634 0.3701 0.3730 1.14e-78 2jif:C, 2jif:B, 2jif:D
16 4m9a:B 376 375 0.3660 0.3777 0.3787 1.07e-77 4m9a:A
17 2z1q:B 549 390 0.3711 0.2623 0.3692 8.25e-77 2z1q:A
18 1rx0:A 384 378 0.3299 0.3333 0.3386 6.18e-76 1rx0:C, 1rx0:B, 1rx0:D
19 4iv6:B 383 379 0.3402 0.3446 0.3483 4.51e-74 4iv6:A
20 4kto:A 377 380 0.3557 0.3660 0.3632 3.51e-73 4kto:C, 4kto:B, 4kto:D
21 8sgr:A 393 379 0.3376 0.3333 0.3456 1.05e-72 1ivh:A, 1ivh:B, 1ivh:C, 1ivh:D, 8sgr:B, 8sgr:C, 8sgr:D
22 2d29:A 386 386 0.3918 0.3938 0.3938 3.37e-72 2d29:B
23 3mpi:C 395 384 0.3531 0.3468 0.3568 1.24e-71 3mpi:A, 3mpi:B, 3mpi:D, 3mpj:B, 3mpj:A, 3mpj:D, 3mpj:E, 3mpj:F, 3mpj:G
24 7szv:A 372 372 0.3402 0.3548 0.3548 1.31e-70 7szv:B
25 3nf4:A 369 372 0.3531 0.3713 0.3683 1.20e-68 3nf4:B
26 8w0t:A 398 381 0.3170 0.3090 0.3228 3.15e-65 8w0t:B, 8w0t:C, 8w0t:D, 8w0u:A, 8w0u:B, 8w0u:C, 8w0u:D, 8w0z:A, 8w0z:B, 8w0z:C, 8w0z:D, 8w0z:E, 8w0z:F, 8w0z:G, 8w0z:H
27 3owa:C 587 396 0.3531 0.2334 0.3460 4.14e-65 3owa:A, 3owa:B, 3owa:D
28 6es9:A 545 376 0.3351 0.2385 0.3457 7.06e-65 6es9:B
29 5idu:C 405 388 0.3479 0.3333 0.3479 9.26e-65 5idu:A, 5idu:B, 5idu:D
30 2pg0:A 380 374 0.3351 0.3421 0.3476 2.61e-64 2pg0:B
31 3r7k:A 378 375 0.3351 0.3439 0.3467 3.97e-63 3r7k:B, 3r7k:C, 3r7k:D
32 8phe:A 551 371 0.3325 0.2341 0.3477 5.19e-63 8phe:B, 8phf:A, 8phf:B
33 5af7:B 391 381 0.3093 0.3069 0.3150 3.20e-61 5af7:A, 5ahs:A, 5ahs:B, 5ahs:C, 5ahs:E, 5ahs:F, 5ahs:D
34 5jsc:A 388 314 0.2887 0.2887 0.3567 7.86e-59 5jsc:B, 5jsc:C, 5jsc:D
35 4irn:A 378 376 0.2861 0.2937 0.2952 3.30e-56 4irn:B, 4irn:C, 4irn:D, 4irn:E, 4irn:F, 4irn:G, 4irn:H
36 3oib:A 381 380 0.3273 0.3333 0.3342 2.09e-55 3oib:B, 3p4t:A, 3p4t:B
37 8ca1:B 589 337 0.3015 0.1986 0.3472 3.99e-51 8ca1:A
38 7s7g:A 571 337 0.3093 0.2102 0.3561 4.43e-51 3b96:A, 2uxw:A
39 2eba:A 380 376 0.3093 0.3158 0.3191 2.82e-50 2eba:D, 2eba:C, 2eba:E, 2eba:F, 2eba:G, 2eba:H, 2eba:I
40 7xp7:B 376 370 0.2990 0.3085 0.3135 8.26e-47 7xp7:A, 7xp7:C, 7xp7:D
41 3sf6:A 387 383 0.2861 0.2868 0.2898 3.26e-42
42 6u1v:B 389 387 0.2887 0.2879 0.2894 6.33e-42 6u1v:A, 6u1v:C, 6u1v:D
43 6cxt:B 372 383 0.2732 0.2849 0.2768 8.05e-41 6cy8:B
44 3gqt:C 385 375 0.2809 0.2831 0.2907 1.25e-38 3d6b:C, 3eon:C, 3gnc:A, 3gnc:B, 3gnc:C, 3gnc:D, 3gqt:A, 3gqt:B
45 6af6:A 383 382 0.2603 0.2637 0.2644 6.31e-38 5zw2:A, 5zw7:A, 5zw8:A
46 2ix6:A 416 379 0.2706 0.2524 0.2770 6.54e-38 2ix5:A, 2ix5:B, 2ix5:C, 2ix5:D, 2ix6:C, 2ix6:F, 2ix6:B, 2ix6:E, 2ix6:D
47 2r0m:A 390 377 0.2680 0.2667 0.2759 1.28e-37 2r0n:A, 1siq:A, 1sir:A
48 4hr3:A 407 407 0.2964 0.2826 0.2826 1.83e-37
49 3swo:A 388 383 0.2500 0.2500 0.2533 9.06e-34 3swo:D, 3swo:B, 3swo:C
50 3mkh:A 426 401 0.2861 0.2606 0.2768 3.81e-31 3mkh:B, 3mkh:C, 3mkh:D
51 2wbi:B 398 402 0.2629 0.2563 0.2537 2.44e-30 2wbi:A
52 1r2j:A 353 360 0.2474 0.2720 0.2667 6.70e-30
53 8ciw:A 555 381 0.2706 0.1892 0.2756 5.04e-28 8ciw:B
54 4x28:A 386 385 0.2552 0.2565 0.2571 2.79e-25 4x28:B
55 3d9d:A 432 421 0.2526 0.2269 0.2328 1.01e-22 2c0u:A, 2c0u:B, 2c0u:C, 2c0u:D, 2c12:A, 2c12:B, 2c12:C, 2c12:D, 2c12:E, 2c12:F, 3d9d:B, 3d9d:C, 3d9d:D, 3d9e:A, 3d9e:B, 3d9e:C, 3d9e:D, 3d9f:A, 3d9f:B, 3d9f:C, 3d9f:D, 3d9g:A, 3d9g:B, 3d9g:C, 3d9g:D, 3fcj:A, 3fcj:B, 3fcj:C, 3fcj:D, 2reh:A, 2reh:B, 2reh:C, 2reh:D, 2zaf:A, 2zaf:B, 2zaf:C, 2zaf:D
56 6kse:A 607 310 0.2216 0.1417 0.2774 1.27e-17 6kse:B
57 6sd8:X 503 275 0.1856 0.1431 0.2618 2.96e-17 6sd8:A, 6sda:A, 6sda:B
58 6wy8:B 384 284 0.1881 0.1901 0.2570 7.95e-17 6wy8:D, 6wy9:A
59 6ksa:B 611 315 0.2216 0.1408 0.2730 2.34e-16 6kpt:A, 6kpt:B, 6kri:A, 6kri:B, 6ks9:A, 6ks9:B, 6ksa:A, 6ksb:A, 6ksb:B, 6lpy:A, 6lpy:B, 6lq0:A, 6lq0:B, 6lq1:A, 6lq1:B, 6lq2:A, 6lq2:B, 6lq3:A, 6lq3:B, 6lq4:A, 6lq4:B, 6lq5:A, 6lq5:B, 6lq6:A, 6lq6:B, 6lq7:A, 6lq7:B, 6lq8:A, 6lq8:B
60 8hk0:B 379 202 0.1443 0.1478 0.2772 7.75e-16 8hk0:A
61 5z8t:A 395 353 0.2320 0.2278 0.2550 9.88e-15 5z8t:B, 5z8t:C
62 5ez3:B 541 268 0.1856 0.1331 0.2687 3.50e-14 5ez3:A, 5ez3:C, 5ez3:D
63 4xvx:B 373 277 0.1778 0.1850 0.2491 3.02e-13 4xvx:A
64 3u33:A 540 274 0.1778 0.1278 0.2518 4.20e-13 3djl:A, 3u33:B, 3u33:C, 3u33:D, 3u33:E, 3u33:F, 3u33:G, 3u33:H, 3u33:I, 3u33:J, 3u33:K, 3u33:L
65 4kcf:A 407 358 0.2165 0.2064 0.2346 7.62e-13 3m9v:A
66 6wy8:C 364 386 0.2397 0.2555 0.2409 1.97e-10 6wy8:A, 6wy9:B
67 4x28:D 364 381 0.2088 0.2225 0.2126 4.51e-10 4x28:C
68 4y9j:B 593 329 0.2036 0.1332 0.2401 2.99e-09 4y9j:A, 4y9l:A, 4y9l:B
69 1w07:B 658 204 0.1340 0.0790 0.2549 2.36e-08 1w07:A
70 2fon:B 656 279 0.1727 0.1021 0.2401 5.99e-08 2fon:A, 2fon:C
71 5ys9:A 692 177 0.1289 0.0723 0.2825 1.62e-07 5ys9:B
72 4zyj:D 392 380 0.2268 0.2245 0.2316 2.10e-07 4zyj:A, 4zyj:B, 4zyj:C
73 5k3i:A 661 207 0.1237 0.0726 0.2319 2.39e-05 5k3i:B, 5k3i:C, 5k3i:D, 5k3i:E, 5k3i:F, 5k3i:G, 5k3i:H
74 5y9d:A 687 177 0.1160 0.0655 0.2542 6.65e-05 5y9d:B
75 5xdc:B 402 271 0.1624 0.1567 0.2325 0.008 5xdb:A, 5xdb:B, 5xdb:C, 5xdb:D, 5xdc:A, 5xdc:C, 5xdc:D, 5xdd:A, 5xdd:B, 5xdd:C, 5xdd:D, 5xde:A, 5xde:B, 5xde:C, 5xde:D, 5xdg:A, 5xdg:B, 5xdg:C, 5xdg:D
76 7q86:A 612 208 0.1392 0.0882 0.2596 0.010 7q86:B
77 1is2:A 637 198 0.1263 0.0769 0.2475 0.011 2ddh:A, 1is2:B
78 4d1j:D 540 65 0.0515 0.0370 0.3077 0.35 4d1j:A, 4d1j:B, 4d1j:C, 4d1j:E, 4d1j:F, 4d1j:G, 4d1j:H, 5jaw:A, 5jaw:D, 5jaw:B, 5jaw:C, 5jaw:E, 5jaw:F, 5jaw:G, 5jaw:H, 8pej:A, 8pej:B, 8pej:C, 8pej:D, 8pej:E, 8pej:F, 8pej:G, 8pej:H, 6tbf:A, 6tbf:B, 6tbf:C, 6tbf:D, 6tbf:E, 6tbf:F, 6tbf:G, 6tbf:H, 6tbg:A, 6tbg:B, 6tbg:C, 6tbg:D, 6tbg:E, 6tbg:F, 6tbg:G, 6tbg:H, 6tbh:A, 6tbh:C, 6tbh:B, 6tbh:D, 6tbh:E, 6tbh:G, 6tbh:F, 6tbh:H, 6tbi:A, 6tbi:B, 6tbi:C, 6tbi:D, 6tbi:E, 6tbi:F, 6tbi:G, 6tbi:H, 6tbj:A, 6tbj:B, 6tbj:C, 6tbj:D, 6tbj:E, 6tbj:F, 6tbj:G, 6tbj:H, 6tbk:A, 6tbk:B, 6tbk:C, 6tbk:D, 6tbk:E, 6tbk:F, 6tbk:G, 6tbk:H
79 5k3j:A 662 142 0.0825 0.0483 0.2254 0.78 5k3j:B
80 2r66:A 456 60 0.0490 0.0417 0.3167 0.78 2r68:A
81 5tip:A 436 35 0.0335 0.0298 0.3714 1.2 5tip:B, 5tip:C, 5tip:D, 5tiq:A, 5tiq:B
82 2rfq:A 388 238 0.1443 0.1443 0.2353 3.2 2rfq:B, 2rfq:C, 2rfq:D
83 3nz2:J 185 19 0.0284 0.0595 0.5789 4.5 3ect:A, 3nz2:A, 3nz2:C, 3nz2:B, 3nz2:D, 3nz2:E, 3nz2:F, 3nz2:G, 3nz2:H, 3nz2:I, 3nz2:K, 3nz2:L
84 7kb7:A 218 45 0.0387 0.0688 0.3333 5.0
85 7d3t:D 62 43 0.0464 0.2903 0.4186 5.4 7d3t:A, 7d3t:B, 7d3t:C
86 1us4:A 297 47 0.0438 0.0572 0.3617 6.6 1us5:A
87 5ei3:A 191 52 0.0412 0.0838 0.3077 6.7 3am7:A, 4aza:A, 4aza:C, 4bea:A, 5bxv:A, 5bxv:C, 7d6y:A, 4dt6:A, 4dum:A, 5ehc:A, 5eir:A, 1ej1:A, 1ej1:B, 1ej4:A, 1ejh:A, 1ejh:B, 1ejh:C, 1ejh:D, 5ekv:A, 5ekv:C, 7ezw:A, 6gkj:A, 6gkj:B, 6gkj:C, 6gkj:D, 6gkk:A, 6gkk:B, 6gkk:C, 6gkk:D, 6gkl:A, 6gkl:B, 6gkl:C, 6gkl:D, 1ipb:A, 1ipc:A, 5j5o:A, 5j5o:B, 5j5o:C, 5j5o:D, 5j5y:A, 5j5y:B, 1l8b:A, 1l8b:B, 5m7v:A, 5m7v:B, 5m7v:C, 5m7w:A, 5m7w:B, 5m7w:C, 5m7w:D, 5m7x:A, 5m7x:B, 5m7x:C, 5m7x:D, 5m7z:A, 5m7z:B, 5m7z:C, 5m80:A, 5m80:B, 5m81:A, 5m81:B, 5m81:C, 5m81:D, 5m83:A, 5m83:B, 5m84:A, 5m84:B, 7meu:A, 7meu:B, 5osx:A, 5osx:B, 8sx4:A, 8sx4:B, 5t46:A, 5t46:C, 4tpw:A, 4tpw:B, 4tqb:A, 4tqb:B, 4tqc:A, 4tqc:B, 6u06:A, 6u06:B, 6u06:C, 6u06:D, 6u09:A, 6u09:B, 6u09:C, 6u09:D, 3u7x:A, 3u7x:B, 2v8w:A, 2v8w:E, 2v8x:A, 2v8x:E, 2v8y:A, 2v8y:E, 2w97:A, 2w97:B, 1wkw:A, 7xtp:A, 7xtp:B, 6ylr:A, 6ylr:B, 6ylt:A, 6ylt:B, 6ylt:C, 6ylt:D, 6ylv:A, 6ylv:B, 6ylv:C, 6ylv:D, 5zjy:A, 5zjz:A, 5zk5:A, 5zk7:A, 5zk7:B, 5zk9:A, 5zml:A
88 7crc:B 1112 29 0.0309 0.0108 0.4138 6.7 7crc:A, 7crc:C, 7crc:D, 7xoz:A, 7xoz:B
89 8dhl:B 853 74 0.0567 0.0258 0.2973 8.9 8dhl:A
90 7aih:G 365 72 0.0490 0.0521 0.2639 9.4 7am2:G, 7ane:G

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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