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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GGIREKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFEKLLPFVK
GNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDA
GNKVGQSEASLLNLLNISPFTFGLTVVQVYDNGQVFPSSILDI

The query sequence (length=203) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4v6i:Bs 257 203 1.0000 0.7899 1.0000 2.55e-148 8ccs:DD, 8cdl:DD, 8cdr:DD, 8ceh:DD, 8cf5:DD, 8cg8:DD, 8cgn:DD, 8civ:DD, 8cku:DD, 8cmj:DD, 8eub:VA, 8evq:V, 8evr:V, 8evs:V, 8ewb:V, 6gq1:P0, 6gqb:P0, 6gqv:P0, 3j16:G, 5juo:VA, 5jup:VA, 5jus:VA, 5jut:VA, 5juu:VA, 8k2d:P0, 8k82:P0, 7osa:uL10, 7osm:uL10, 7rr5:P0, 4v7h:B8, 6woo:r, 6xiq:P0, 8y0u:P0
2 5it7:rr 195 195 0.8571 0.8923 0.8923 1.52e-118 6uz7:Br
3 7olc:Ls 189 186 0.6601 0.7090 0.7204 2.65e-99 7old:Ls, 8oo0:Ls, 7z3n:Ls, 7z3o:Ls
4 4v6x:Cq 280 197 0.5813 0.4214 0.5990 1.13e-79 7a01:K2, 5aj0:AK, 9bdn:ALP0, 9bdp:ALP0, 8bhf:e1, 8bpo:q2, 8btk:Bs, 6d90:s, 6d9j:s, 9f1b:Bs, 9f1c:Bs, 9f1d:Bs, 6frk:6, 6ftg:s, 6fti:s, 6ftj:s, 8g5z:Lq, 8g60:Lq, 8g6j:Lq, 6gz3:AK, 6gz4:AK, 6gz5:AK, 6hcf:s3, 6hcj:t3, 6hcm:s3, 6hcq:t3, 3j7p:q, 3j92:s, 3jag:s, 3jah:s, 3jai:s, 3jaj:q, 3jan:q, 8k2c:Ls, 7ls1:j, 7ls2:j, 5lzs:s, 5lzt:s, 5lzu:s, 5lzv:s, 5lzw:s, 5lzx:s, 5lzy:s, 5lzz:s, 6mtd:s, 6mte:s, 7nwg:t3, 7nwh:s, 7nwi:s, 7o7y:Bs, 7o7z:Bs, 7o80:Bs, 7o81:Bs, 6olg:AK, 7oyd:s, 8p2k:Bs, 8q87:Bs, 6r5q:s, 6r6g:s, 6r6p:s, 6r7q:s, 8scb:s, 6sgc:s2, 6t59:s3, 4v6w:Cq, 8xsx:Ls, 8xsy:Ls, 8xsz:Ls, 8yoo:Ls, 8yop:Ls, 6zm7:Ls, 6zme:Ls, 6zmi:Ls, 6zmo:Ls, 6zvk:K2
5 5dc3:p0 143 105 0.5172 0.7343 1.0000 2.76e-72 5dgv:p0, 5fci:p0, 6hhq:p0, 5lyb:p0, 6oig:q, 5on6:p0, 4v88:Dq, 4v8t:q
6 5dc3:p0 143 14 0.0690 0.0979 1.0000 0.068 5dgv:p0, 5fci:p0, 6hhq:p0, 5lyb:p0, 6oig:q, 5on6:p0, 4v88:Dq, 4v8t:q
7 5dat:p0 143 105 0.5172 0.7343 1.0000 6.07e-72 8aaf:0, 8agt:0, 8agu:0, 8agv:0, 8agw:0, 8agx:0, 8agz:0, 5apn:q, 5apo:q, 5dge:p0, 5dgf:p0, 5fcj:p0, 5i4l:p0, 6i7o:BU, 6i7o:YU, 3j77:P0, 3j78:P0, 5mei:p0, 5ndg:p0, 5obm:p0, 6r84:r, 6r86:r, 6r87:r, 6sv4:BU, 6sv4:YU, 6sv4:ZU, 6t83:ba, 5tbw:p0, 5tga:p0, 5tgm:p0, 4u3m:p0, 4u3n:p0, 4u3u:p0, 4u4n:p0, 4u4o:p0, 4u4q:p0, 4u4r:p0, 4u4u:p0, 4u4y:p0, 4u4z:p0, 4u50:p0, 4u51:p0, 4u52:p0, 4u53:p0, 4u55:p0, 4u56:p0, 4u6f:p0, 4v7r:DM, 4v8y:Bq, 4v8z:Bq
8 5dat:p0 143 21 0.1034 0.1469 1.0000 7.18e-07 8aaf:0, 8agt:0, 8agu:0, 8agv:0, 8agw:0, 8agx:0, 8agz:0, 5apn:q, 5apo:q, 5dge:p0, 5dgf:p0, 5fcj:p0, 5i4l:p0, 6i7o:BU, 6i7o:YU, 3j77:P0, 3j78:P0, 5mei:p0, 5ndg:p0, 5obm:p0, 6r84:r, 6r86:r, 6r87:r, 6sv4:BU, 6sv4:YU, 6sv4:ZU, 6t83:ba, 5tbw:p0, 5tga:p0, 5tgm:p0, 4u3m:p0, 4u3n:p0, 4u3u:p0, 4u4n:p0, 4u4o:p0, 4u4q:p0, 4u4r:p0, 4u4u:p0, 4u4y:p0, 4u4z:p0, 4u50:p0, 4u51:p0, 4u52:p0, 4u53:p0, 4u55:p0, 4u56:p0, 4u6f:p0, 4v7r:DM, 4v8y:Bq, 4v8z:Bq
9 8c3a:P0 107 107 0.4187 0.7944 0.7944 1.14e-58 8c3a:p0, 8cq7:P0, 8cq7:p0, 8cqw:P0, 8cre:P0, 8cre:p0
10 4v3p:Ls 262 201 0.4581 0.3550 0.4627 5.13e-58 4v7e:Cq
11 5an9:C 205 200 0.4138 0.4098 0.4200 5.25e-53 5anb:C, 5anc:C, 6qkl:C
12 7zjw:Lt 115 98 0.2709 0.4783 0.5612 9.78e-37
13 8cqw:p0 79 99 0.3005 0.7722 0.6162 1.54e-29
14 4v9f:G 254 203 0.3202 0.2559 0.3202 4.30e-29 2qa4:G
15 4v4n:Ak 212 204 0.2906 0.2783 0.2892 1.24e-26 4v6u:Bk
16 5d8h:B 207 200 0.2759 0.2705 0.2800 9.78e-22 5d6g:A, 5dar:E
17 8idt:J 223 198 0.2414 0.2197 0.2475 4.91e-13 8fkr:SQ, 8fks:SQ, 8fkt:SQ, 8fku:SQ, 8fkv:SQ, 8fkw:SQ, 8fkx:SQ, 8fky:SQ, 8fkz:SQ, 8fl0:SQ, 8fl2:SQ, 8fl3:SQ, 8fl4:SQ, 8fl6:SQ, 8fl7:SQ, 8fl9:SQ, 8idy:J, 8ie3:J, 8ine:J, 8inf:J, 8ink:v, 8ipd:v, 8ipx:v, 8ipy:v, 8ir1:v, 8ir3:v
18 8i9t:CF 245 220 0.2611 0.2163 0.2409 1.28e-11 8i9v:CF, 8i9w:CF, 8i9x:CF, 8i9y:CF, 8i9z:CF, 8ia0:CF, 8pv1:CF, 8pv2:CF, 8pv3:CF, 8pv4:CF, 8pv5:CF, 8pv6:CF, 8pv7:CF, 8pv8:CF, 8pvk:CF, 8pvl:CF
19 4v7f:n 236 214 0.2808 0.2415 0.2664 5.07e-11 7bt6:W, 7btb:W, 6elz:W, 6em1:W, 6em5:W, 6ft6:W, 8hfr:Wg, 3jct:W, 5jcs:n, 6m62:W, 6n8j:W, 6n8k:W, 7nac:W, 7of1:W, 7oh3:W, 7ohp:W, 7ohq:W, 7ohr:W, 7oht:W, 7ohu:W, 7ohv:W, 7ohy:W, 7r7a:W, 7u0h:W, 7ug6:W, 7uoo:W, 7uqb:W, 7uqz:W, 7v08:W, 8v83:W, 8v84:W, 8v87:W, 6ylg:W, 6ylh:W, 6ylx:W, 6yly:W, 7z34:W
20 5dar:B 160 199 0.1921 0.2437 0.1960 5.15e-08
21 7ohs:W 172 193 0.2365 0.2791 0.2487 1.81e-06
22 6n8l:W 133 113 0.1478 0.2256 0.2655 1.08e-05
23 7ohw:W 185 59 0.0887 0.0973 0.3051 0.003
24 8fla:SQ 127 93 0.1182 0.1890 0.2581 0.016 8flb:SQ, 8flc:SQ, 8fld:SQ, 8fle:SQ, 8flf:SQ
25 5mmi:I 137 86 0.0985 0.1460 0.2326 0.019 5mmm:I
26 3j9w:BJ 123 57 0.1084 0.1789 0.3860 0.051 7as8:L, 7as9:L, 5njt:b, 7o5b:p, 7ope:L, 7qgu:H, 7qh4:H, 6tnn:b, 6tpq:b
27 7e1b:A 209 61 0.1034 0.1005 0.3443 0.95 7e1b:B, 7e1b:C, 7e1b:H, 7e1b:D, 7e1b:E, 7e1b:F, 7e1b:G, 7e1h:A, 7e1h:B, 7e1h:E
28 6dts:A 379 30 0.0591 0.0317 0.4000 1.7 8dhd:A, 6dts:B, 2fnc:A
29 8tzj:A 220 86 0.1084 0.1000 0.2558 1.8 8tzj:B, 8tzk:A, 8tzk:B, 8tzl:A, 8tzl:B
30 2cin:A 435 26 0.0493 0.0230 0.3846 1.9 2cjd:A, 2cjg:A, 2cjh:A, 2jje:A, 2jjg:A, 2jjh:A
31 8fmw:AJ 162 44 0.0591 0.0741 0.2727 4.8 8fn2:J
32 6dzi:I 126 83 0.1133 0.1825 0.2771 5.7 6dzp:I, 8fr8:R, 8kab:I, 5o60:I, 5o61:I, 7s0s:J, 8v9j:I, 8v9k:I, 8v9l:I, 7xam:I, 8xz3:I, 7y41:I, 5zeb:I, 5zep:I, 5zet:I
33 7sqc:C2 1498 90 0.1232 0.0167 0.2778 6.6 7sqc:C0, 7sqc:C1, 7sqc:C3
34 7z8f:e 4579 69 0.0936 0.0041 0.2754 7.1 5owo:A, 8pr2:f, 8ptk:m, 8ptk:n, 7z8f:f, 7z8f:m, 7z8f:n, 7z8h:A
35 8ptk:f 4502 69 0.0936 0.0042 0.2754 8.3 8ptk:e
36 5nug:A 2920 69 0.0936 0.0065 0.2754 8.8 5nug:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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