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BioLiP
>protein
GEWEIIDIGPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYEDKGYEYQLYVYASDKLFRADISEDYKTRGRKL
LRFNGPVPPP

The query sequence (length=90) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7d75:A 90 90 1.0000 1.0000 1.0000 1.47e-63 7d75:B, 7d75:C, 6l4n:A
2 8uo8:A 574 46 0.1667 0.0261 0.3261 0.67
3 5nj5:A 480 42 0.1333 0.0250 0.2857 0.79 5nj5:C, 5nj9:A, 5nj9:C, 5nja:A, 5nja:C, 5njb:A, 5njb:C, 5njc:A, 5njc:C, 5njf:A, 5njf:C
4 1z72:B 215 33 0.1556 0.0651 0.4242 1.7
5 3wh2:A 132 27 0.1111 0.0758 0.3704 5.4 3wh3:A
6 8h4v:A 148 26 0.1000 0.0608 0.3462 7.9 8h4v:B, 8hb5:A, 5kth:A, 5kti:A, 4kzv:A, 4kzv:B, 4kzw:A, 4kzw:B, 4zrv:A, 4zrv:C, 4zrv:B, 4zrw:A
7 3aae:B 264 33 0.1333 0.0455 0.3636 8.7 3aa0:B, 3aa1:B, 3aa6:B, 3aae:D, 3aae:F, 3aae:H, 3aae:J, 7ds2:B, 7ds3:B, 7ds4:B, 7ds6:B, 7ds8:B, 7dsb:B, 3lk4:B, 3lk4:E, 3lk4:H, 3lk4:K, 3lk4:N, 3lk4:Q, 3lk4:T, 3lk4:W, 3lk4:Z, 3lk4:2, 3lk4:5, 3lk4:8
8 3q8x:D 271 25 0.1111 0.0369 0.4000 9.2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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