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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GEQWYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHRILLLSGPSGCSKSTVIKELSKILVPKYRQNSHKVTEFRG
DCIVNDLPQMESFSEFLKGARYLVMSNLSLILIEDLPNVFHIDTRRRFQQLILQWLYSSEPLLPPLVICITECEIPENDN
NYRKFGIDYTFSAETIMNKEILMHPRLKRIKFNPINSTLLKKHLKFICVQNMKMLKEKNKWNKRQEVIDYIAQETGDIRS
AITTLQFWATSSGSLPISTRESTISYFHAIGKVIHGSHSTNNDNEMINNLFENSNNLLSKEDFKLGILENYNTFNKGEFS
ISDASSIVDCLSECDNMNGLPESNEYGLREVRKTFRNISKQGHNHGTVYFPREWKVRKLQNSFKVQAEDWLNVSLYKYNA
VHSFRNITLEFGYYAPLIRKCQSYKK

The query sequence (length=426) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8dqw:A 522 437 1.0000 0.8161 0.9748 0.0 8fs3:A, 8fs5:A, 8fs6:A, 8fs7:A, 8fs8:A, 7sgz:A, 7st9:A, 7stb:A
2 7ste:A 468 428 0.9531 0.8675 0.9486 0.0 8fs4:A, 7sh2:A
3 7z6h:K 439 295 0.2089 0.2027 0.3017 1.32e-21
4 8umv:D 329 54 0.0423 0.0547 0.3333 0.001 8ui7:D, 8ui8:D, 8ui9:D, 8uii:D, 8umt:D, 8umw:D, 8umy:D, 8un0:D, 8unj:D, 6vvo:D, 7z6h:D
5 8dqx:C 330 107 0.0657 0.0848 0.2617 0.036 8dqw:C, 8dqz:C, 8dr0:C, 8dr1:C, 8dr3:C, 8dr4:C, 8dr5:C, 8dr6:C, 8dr7:C, 8fs3:C, 8fs4:C, 8fs5:C, 8fs6:C, 8fs7:C, 8fs8:C, 7sgz:C, 7sh2:C, 7st9:C, 7stb:C, 7ste:C, 1sxj:C, 7tfh:C, 7tfi:C, 7tfj:C, 7tfk:C, 7tfl:C, 7thj:C, 7thv:C, 8thb:C, 8thc:C, 8thd:C, 7ti8:C, 7tib:C, 7tic:C, 7tid:C, 7tku:C, 8tw7:3, 8tw8:3, 8twa:3, 8twb:3, 7u19:C, 7u1a:C, 7u1p:C
6 8ui7:C 339 61 0.0469 0.0590 0.3279 0.037 8ui8:C, 8ui9:C, 8uii:C, 8umt:C, 8umu:C, 8umv:C, 8umw:C, 8umy:C, 8un0:C, 8unj:C, 6vvo:C, 7z6h:G
7 8dr0:D 344 63 0.0423 0.0523 0.2857 0.077 8dqw:D, 8dqx:D, 8dqz:D, 8dr1:D, 8dr3:D, 8dr4:D, 8dr5:D, 8dr6:D, 8dr7:D, 8fs3:D, 8fs4:D, 8fs5:D, 8fs6:D, 8fs7:D, 8fs8:D, 7sgz:D, 7sh2:D, 7st9:D, 7stb:D, 7ste:D, 1sxj:D, 7tfh:D, 7tfi:D, 7tfj:D, 7tfk:D, 7tfl:D, 7thj:D, 7thv:D, 8thb:D, 8thc:D, 8thd:D, 7ti8:D, 7tib:D, 7tic:D, 7tid:D, 7tku:D, 8tw7:2, 8tw8:2, 8twa:2, 8twb:2, 7u19:D, 7u1a:D, 7u1p:D
8 3add:A 251 69 0.0516 0.0876 0.3188 0.10 3a4l:A, 3a4l:B, 3a4m:A, 3a4m:B, 3adb:A, 3adb:B, 3adc:A, 3adc:B, 3add:B, 3am1:A
9 8ui7:E 348 77 0.0493 0.0603 0.2727 0.26 8ui8:E, 8ui9:E, 8uii:E, 8umt:E, 8umu:E, 8umv:E, 8umw:E, 8umy:E, 8un0:E, 8unj:E, 6vvo:E, 7z6h:E
10 6tmf:d 582 112 0.0751 0.0550 0.2857 0.46 3ozx:A, 3ozx:B
11 1iqp:A 326 250 0.1291 0.1687 0.2200 0.49 1iqp:B, 1iqp:C, 1iqp:E
12 2chq:A 313 61 0.0376 0.0511 0.2623 1.3 2chg:A, 2chg:B, 2chg:C, 2chg:D, 2chq:B, 2chq:C
13 7pxc:E 483 170 0.0915 0.0807 0.2294 1.4 7px9:A, 7px9:B, 7px9:C, 7px9:E, 7px9:F, 7pxb:A, 7pxb:B, 7pxb:C, 7pxb:E, 7pxb:F, 7pxc:B, 7pxc:C, 7pxc:F, 7pxc:A, 7pxd:B, 7pxd:C, 7pxd:E, 7pxd:F, 7pxd:A
14 8ui7:A 643 72 0.0493 0.0327 0.2917 1.7 8ui8:A, 8ui9:A, 8uii:A
15 4die:C 213 27 0.0282 0.0563 0.4444 2.2 4die:A, 4die:B, 4die:D
16 8uxl:A 4232 81 0.0540 0.0054 0.2840 2.3 7u9q:A, 7u9q:D, 7u9q:B, 7u9q:C, 7u9r:A, 7u9r:D, 7u9r:B, 7u9r:C, 7u9t:A, 7u9t:D, 7u9t:B, 7u9t:C, 7u9x:A, 7u9x:B, 7u9x:C, 7u9x:D, 7u9z:A, 7u9z:B, 7u9z:C, 7u9z:D, 7ua1:A, 7ua1:B, 7ua1:C, 7ua1:D, 7ua5:A, 7ua5:B, 7ua5:C, 7ua5:D, 7ua9:A, 7ua9:B, 7ua9:C, 7ua9:D, 8uq2:A, 8uq2:B, 8uq2:C, 8uq2:D, 8uq3:A, 8uq3:B, 8uq3:C, 8uq3:D, 8uq4:A, 8uq4:B, 8uq4:C, 8uq4:D, 8uq5:A, 8uq5:B, 8uq5:C, 8uq5:D, 8uxc:A, 8uxc:B, 8uxc:C, 8uxc:D, 8uxe:A, 8uxe:B, 8uxe:C, 8uxe:D, 8uxf:A, 8uxf:B, 8uxf:C, 8uxf:D, 8uxg:A, 8uxg:B, 8uxg:C, 8uxg:D, 8uxl:B, 8uxl:C, 8uxl:D, 8uxm:A, 8uxm:B, 8uxm:C, 8uxm:D
17 7ua3:A 4443 81 0.0540 0.0052 0.2840 2.3 7ua3:B, 7ua3:C, 7ua3:D, 7ua4:A, 7ua4:B, 7ua4:C, 7ua4:D
18 6qex:A 1182 67 0.0516 0.0186 0.3284 2.4 7a65:A, 7a69:A, 7a6c:A, 7a6e:A, 7a6f:A, 6c0v:A, 7o9w:A
19 8uxh:A 4004 81 0.0540 0.0057 0.2840 2.4 8uxh:B, 8uxh:C, 8uxh:D, 8uxi:A, 8uxi:B, 8uxi:C, 8uxi:D
20 8a8h:B 146 43 0.0423 0.1233 0.4186 2.6
21 6ttl:A 479 151 0.0915 0.0814 0.2583 2.6 6ttl:B
22 6g2g:B 273 58 0.0469 0.0733 0.3448 2.7 6g2g:A
23 1lvg:A 190 20 0.0282 0.0632 0.6000 2.8
24 8jwf:A 1204 75 0.0610 0.0216 0.3467 2.9 8jwg:A, 8jwi:A
25 8pts:A 195 20 0.0282 0.0615 0.6000 2.9 8pts:B
26 5x9w:A 771 27 0.0258 0.0143 0.4074 3.3 5x9w:B, 5yk4:A, 5yk4:B
27 8dtz:A 4061 81 0.0540 0.0057 0.2840 3.4 8dtz:B, 8dtz:C, 8dtz:D
28 4m1m:A 1188 37 0.0352 0.0126 0.4054 3.8 8avy:A, 6fn1:A, 3g60:A, 3g60:B, 3g61:A, 3g61:B, 5koy:A, 5koy:B, 4m1m:B, 4m2s:A, 4m2s:B, 4m2t:A, 4m2t:B, 7otg:A, 8pee:A, 6q81:A, 4q9i:A, 4q9j:A, 4q9k:A, 4q9l:A, 6qee:A, 6ujn:A, 6ujp:A, 6ujr:A, 6ujs:A, 6ujt:A, 6ujw:A, 4xwk:A, 7zk4:A, 7zk5:A, 7zk6:A, 7zk7:A, 7zk8:A, 7zk9:A, 7zka:A, 7zkb:A
29 7niw:A 1140 37 0.0352 0.0132 0.4054 4.0 7niu:A, 7niv:A, 6s7p:A
30 3kb1:A 243 67 0.0446 0.0782 0.2836 4.0 3kb1:B, 6oby:A, 6oby:B
31 6mfu:A 216 25 0.0282 0.0556 0.4800 4.4 6mfu:B, 6mfu:C, 6mfu:D
32 6eg8:I 372 41 0.0399 0.0457 0.4146 5.0 6au6:A, 1azs:C, 1azt:A, 1azt:B, 7bph:A, 8buz:B, 8bv5:B, 3c14:C, 3c15:C, 3c16:C, 1cjk:C, 1cjt:C, 1cju:C, 1cjv:C, 1cs4:C, 1cul:C, 7e5e:A, 7e5e:B, 7e5e:C, 7e5e:D, 6eg8:J, 6eg8:K, 6eg8:L, 3g82:C, 8gge:A, 8ggf:A, 2gvd:C, 2gvz:C, 3maa:C, 7pde:B, 7pdf:B, 6r3q:B, 6r4o:B, 6r4p:B, 1tl7:C, 1u0h:C, 8uo3:A
33 1ex7:A 186 20 0.0258 0.0591 0.5500 5.2 1gky:A
34 8hpl:C 384 43 0.0376 0.0417 0.3721 5.3 7cag:C, 7cag:D, 8hpl:D, 8hpm:C, 8hpm:D, 8hpn:C, 8hpn:D, 8hpr:C, 8hpr:D, 8hps:C, 8hps:D
35 4qrh:B 186 24 0.0282 0.0645 0.5000 5.3 2j41:B, 2j41:C, 2j41:D, 4qrh:C, 4qrh:D
36 5eg1:B 576 78 0.0516 0.0382 0.2821 5.8 5eg1:A, 5ofr:A, 5ofr:B, 4pl0:A, 4pl0:B, 8px9:A, 8px9:B
37 4f4c:A 1250 20 0.0282 0.0096 0.6000 5.9
38 3gp8:A 551 54 0.0352 0.0272 0.2778 6.3 3gpl:A, 3gpl:B
39 5fl3:A 354 65 0.0469 0.0565 0.3077 6.4
40 2ww9:A 490 69 0.0446 0.0388 0.2754 6.5 2wwa:A
41 6wmt:S 202 70 0.0446 0.0941 0.2714 6.5 6weg:D
42 4y0a:A 179 49 0.0352 0.0838 0.3061 6.8
43 8bx8:C 3947 56 0.0399 0.0043 0.3036 7.0 7k58:C, 7k5b:C, 7kek:C
44 1g29:1 372 58 0.0399 0.0457 0.2931 8.3 1g29:2
45 1zny:A 183 20 0.0258 0.0601 0.5500 8.4 1znx:A, 1znz:A
46 7tfh:B 320 64 0.0352 0.0469 0.2344 8.8 8dqw:B, 8dqx:B, 8dqz:B, 8dr0:B, 8dr1:B, 8dr3:B, 8dr4:B, 8dr5:B, 8dr6:B, 8dr7:B, 8fs3:B, 8fs4:B, 8fs5:B, 8fs6:B, 8fs7:B, 8fs8:B, 7sgz:B, 7sh2:B, 7st9:B, 7stb:B, 7ste:B, 1sxj:B, 7tfi:B, 7tfj:B, 7tfk:B, 7tfl:B, 7thj:B, 7thv:B, 8thb:B, 8thc:B, 8thd:B, 7ti8:B, 7tib:B, 7tic:B, 7tid:B, 7tku:B, 8tw7:4, 8tw8:4, 8twa:4, 8twb:4, 7u19:B, 7u1a:B, 7u1p:B
47 7q0n:A 386 84 0.0563 0.0622 0.2857 8.9 7q0n:B, 6s7l:A, 6s7l:B
48 7aqw:p 93 41 0.0282 0.1290 0.2927 9.0 8beh:p
49 2qz4:A 223 47 0.0399 0.0762 0.3617 9.0
50 2d62:A 375 28 0.0258 0.0293 0.3929 9.4
51 7scd:A 371 64 0.0469 0.0539 0.3125 9.5 3bd9:A, 7sce:A
52 8ips:A 573 63 0.0469 0.0349 0.3175 9.7 8ipt:C, 8ipt:D, 7zda:C, 7zdb:C, 7zdc:C, 7zdf:C, 7zdg:C, 7zdk:C, 7zdl:C, 7zdt:C, 7zdu:C, 7zdw:C, 7ze5:C, 7zec:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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