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BioLiP
>protein
GEIGQGLKEIGKGLKEIGFGLKEIGQGLKG

The query sequence (length=30) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7qwa:C 30 30 1.0000 1.0000 1.0000 9.28e-12 7qwa:D
2 7qwb:E 30 30 0.8667 0.8667 0.8667 1.78e-10 6zt1:D, 6zt1:F, 6zt1:A, 6zt1:H, 6zt1:J
3 7a1t:C 30 30 0.8667 0.8667 0.8667 1.78e-10 7a1t:E, 7bim:D, 7bim:F, 7bim:H, 7bim:M, 7bim:P, 7bim:R, 7bim:j, 7bim:U, 7bim:W, 7bim:a, 7bim:c, 7bim:B, 7bim:g, 7bim:i, 7qwd:B, 7qwd:E, 7qwe:B, 7qwe:C, 7qwe:F
4 5ez8:E 30 30 0.6667 0.6667 0.6667 7.98e-09 5ez8:G, 5ez8:A, 7nfj:C, 7nfj:E, 4pna:B, 4pna:D, 4pna:A, 4pna:G
5 7bat:B 30 30 0.7000 0.7000 0.7000 1.27e-08 7baw:D, 7baw:F
6 6g6a:B 30 30 0.5667 0.5667 0.5667 5.40e-08 6g6b:A, 6g6c:H, 6g6c:I, 6g6c:P, 6g6c:Q, 6g6c:R, 6g6c:S, 6g6c:U, 6g6c:X
7 7bau:D 30 30 0.6000 0.6000 0.6000 8.01e-08 7bau:J, 7bau:E, 7bau:G, 7bau:I
8 6eiz:A 30 30 0.6333 0.6333 0.6333 8.75e-08 6eiz:C, 6eiz:E, 4pn9:C, 4pn9:E
9 4pnb:D 30 30 0.5667 0.5667 0.5667 9.66e-08
10 8b16:A 30 30 0.6667 0.6667 0.6667 2.06e-07 8b16:L, 8b16:H, 8b16:J, 8b16:D, 7bas:B, 7bas:A
11 6g6f:C 30 30 0.5667 0.5667 0.5667 3.90e-07 6g6f:A, 6g6f:B, 6g6f:F, 6g6f:G
12 5ez9:F 30 30 0.4667 0.4667 0.4667 3.14e-06 5ez9:B, 5ezc:F, 5ezc:B, 7nfn:C, 7nfn:G, 7nfn:I, 7nfn:M
13 7bo9:A 30 30 0.4667 0.4667 0.4667 4.98e-06 7bo9:D
14 6g68:H 30 30 0.4333 0.4333 0.4333 8.16e-06 6g68:L, 6g68:M, 6g68:O, 6g69:I, 6g69:M
15 8qac:C 30 26 0.6000 0.6000 0.6923 1.54e-05
16 8qac:C 30 24 0.5000 0.5000 0.6250 0.026
17 7k5b:B 4524 17 0.3667 0.0024 0.6471 3.8 8bx8:B, 7k58:B, 7kek:B
18 3rk2:G 77 19 0.2667 0.1039 0.4211 5.8 6wvw:C
19 5gzx:A 292 13 0.2333 0.0240 0.5385 5.8 5gzx:B, 5gzx:C, 5gzx:D
20 5vdn:A 449 23 0.3667 0.0245 0.4783 7.1 5vdn:B
21 4k0x:A 243 25 0.4000 0.0494 0.4800 7.2 4jf4:A, 4jf4:B, 4k0w:A, 6n6u:A, 6n6v:A, 6n6x:A, 6n6y:A, 7t7d:A, 7t7e:A, 7t7f:A, 7t7g:A, 5wi3:B, 5wi3:A, 5wi7:A, 5wi7:B, 5wib:A, 5wib:B, 4x55:A, 4x55:B
22 5v13:A 268 19 0.2667 0.0299 0.4211 7.7 5v13:B, 5v13:C
23 5z2w:A 209 22 0.3333 0.0478 0.4545 7.8 6h9n:A, 6h9o:A, 6h9o:C
24 4pn8:H 30 30 0.4333 0.4333 0.4333 8.7 4pn8:J
25 8jbr:A 1023 23 0.3000 0.0088 0.3913 9.0

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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