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BioLiP
>protein
GCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSF
ISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYEYEKPEAPELVLKTDSCDVNDCVQQVVELLQERDIV

The query sequence (length=159) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1xjq:B 590 175 1.0000 0.2695 0.9086 3.42e-109 8i1m:A, 2ofw:A, 2ofw:B, 2ofw:C, 2ofw:D, 2ofw:E, 2ofw:F, 2ofw:G, 2ofw:H, 2ofx:A, 2ofx:B, 2pey:A, 2pez:A, 2pez:B, 2qjf:A, 2qjf:B, 1x6v:B, 1xnj:B
2 1xjq:A 563 159 0.9245 0.2611 0.9245 4.79e-100 2pey:B, 1xnj:A
3 2ax4:A 198 175 0.7987 0.6414 0.7257 2.69e-92 2ax4:B, 2ax4:C, 2ax4:D, 8i1n:A, 8i1n:B, 8i1n:C, 8i1n:D, 8i1o:A, 8i1o:B, 8i1o:C, 8i1o:D
4 1m7g:C 209 176 0.5723 0.4354 0.5170 2.33e-56 3cr7:A, 3cr7:B, 3cr7:C, 3cr7:D, 1m7g:A, 1m7g:B, 1m7g:D, 1m7h:A, 1m7h:B, 1m7h:C, 1m7h:D
5 6c6b:B 199 174 0.5283 0.4221 0.4828 9.31e-56 6c6b:A, 6c6b:C, 6c6b:D, 6c6b:E, 6c6b:F
6 4fxp:B 200 130 0.4591 0.3650 0.5615 9.06e-48 4fxp:A, 4fxp:C, 3uie:A, 3uie:B, 3uie:C
7 4bzp:A 173 170 0.4843 0.4451 0.4529 1.78e-47 4bzp:B, 4bzq:A, 4bzq:B, 4bzx:A, 4bzx:B
8 5cb8:B 176 169 0.4528 0.4091 0.4260 1.62e-38 5cb6:A, 5cb6:B, 5cb6:C, 5cb6:D, 5cb6:E, 5cb6:F, 5cb8:A
9 7yq0:A 173 168 0.4214 0.3873 0.3988 1.15e-31 7yq0:B, 7yq1:A, 7yq1:B, 7yq1:C, 7yq1:D, 7yq1:E, 7yq1:F
10 2gks:B 529 175 0.4214 0.1267 0.3829 1.04e-30 2gks:A
11 8a8h:B 146 155 0.3774 0.4110 0.3871 6.40e-29
12 1m8p:A 573 173 0.3711 0.1030 0.3410 1.62e-16 1i2d:A, 1i2d:B, 1i2d:C, 1m8p:B, 1m8p:C
13 3add:A 251 172 0.2516 0.1594 0.2326 0.026 3a4l:A, 3a4l:B, 3a4m:A, 3a4m:B, 3adb:A, 3adb:B, 3adc:A, 3adc:B, 3add:B, 3am1:A
14 3e70:C 307 60 0.1132 0.0586 0.3000 0.074
15 8cro:C 390 61 0.1635 0.0667 0.4262 0.089
16 7dnz:A 591 59 0.1321 0.0355 0.3559 0.24 7dny:A, 7dny:B, 7dnz:B, 7ekl:A, 7ekl:B, 8k7b:A, 8k7b:B, 8k7c:A, 8k7c:B, 3nh9:A, 3nha:A, 3nhb:A, 8yr3:A, 8yr3:B, 8yr4:B, 8yr4:A
17 6kf9:C 388 61 0.1572 0.0644 0.4098 0.30 9bct:C, 9bcu:C
18 2axn:A 451 155 0.2327 0.0820 0.2387 0.32 5ajv:B, 5ajw:A, 5ajx:A, 5ajy:A, 5ajz:A, 5ak0:A, 4d4j:A, 4d4k:A, 4d4l:A, 4d4m:A, 2dwo:A, 2dwp:A, 6etj:A, 6hvh:A, 6hvi:A, 6hvj:A, 2i1v:B, 6ibx:A, 6iby:A, 6ibz:A, 6ic0:A, 4ma4:A, 3qpu:A, 3qpv:A, 3qpw:A
19 1bif:A 432 82 0.1447 0.0532 0.2805 0.34 2bif:A, 2bif:B
20 8r3z:A 755 40 0.0943 0.0199 0.3750 0.45
21 4ayx:A 571 97 0.1761 0.0490 0.2887 0.59 4ayt:A, 4ayw:A, 7y48:B, 3zdq:A
22 7plo:3 628 59 0.1069 0.0271 0.2881 0.73 7pfo:3
23 8q6p:3 370 59 0.1069 0.0459 0.2881 0.74
24 8b9d:3 569 59 0.1069 0.0299 0.2881 0.78
25 7w1y:B 651 59 0.1069 0.0261 0.2881 0.78 7w1y:3
26 3ndb:B 420 38 0.0755 0.0286 0.3158 0.81 2v3c:C, 2v3c:D, 4xco:D
27 6xtx:3 608 59 0.1069 0.0280 0.2881 0.87
28 6rax:3 625 59 0.1069 0.0272 0.2881 0.94
29 6ray:3 600 59 0.1069 0.0283 0.2881 1.0 6raw:3, 6raz:3
30 6zhh:A 883 74 0.1384 0.0249 0.2973 1.7 6zhf:A, 6zhg:A, 6zhh:B, 6zhh:C, 6zhh:D, 6zhh:E, 6zhh:F, 6zhh:G, 6zhh:H
31 5xy3:Q 185 42 0.0881 0.0757 0.3333 1.8
32 7epk:A 426 45 0.1006 0.0376 0.3556 1.9
33 5ere:A 540 61 0.1321 0.0389 0.3443 1.9
34 8fcv:R 343 55 0.1069 0.0496 0.3091 2.0 8fcu:Q, 8fcv:Q, 8fcv:S, 8fcv:T, 8fcv:U, 8fcv:V, 8fcv:W, 8fcw:R, 8fcw:S, 8fcw:T, 8fcw:U, 8fcw:V, 8fcx:R, 8fcx:S, 8fcx:T, 8fcx:U, 8fcx:V, 8ff4:Q, 8ff4:R, 8ff4:S, 8ff4:T, 8ff4:U, 8ff4:V, 8ff4:W
35 4f4c:A 1250 42 0.1195 0.0152 0.4524 2.5
36 4f4c:A 1250 69 0.1258 0.0160 0.2899 8.3
37 5jp0:A 745 66 0.1384 0.0295 0.3333 2.6 5jp0:B
38 7zhf:A 250 35 0.0692 0.0440 0.3143 2.6 7zhk:A, 7zhk:B, 7zhk:C
39 8p5e:3 649 27 0.0818 0.0200 0.4815 2.7 8kg6:3, 8kg8:3, 8kg9:3, 8p62:3, 8p63:3, 7pt6:3, 7pt6:C, 7pt7:3, 7qhs:3, 7v3u:3, 7v3u:C, 7v3v:3, 7v3v:C, 7w8g:3, 7w8g:C, 7z13:3, 7z13:b
40 5htk:A 425 60 0.1195 0.0447 0.3167 2.7 5hr5:A, 5htk:B
41 1upt:G 170 49 0.1195 0.1118 0.3878 2.9 4dcn:A, 4dcn:B, 5ee5:B, 5j5c:A, 1r4a:A, 1r4a:B, 1r4a:C, 1r4a:D, 1upt:A, 1upt:C, 1upt:E
42 5v8f:3 654 27 0.0818 0.0199 0.4815 3.1 5bk4:B, 5bk4:3, 6eyc:3, 6f0l:3, 6f0l:B, 3ja8:3, 7p30:3, 7p30:B, 7p5z:3, 7p5z:B, 6ptn:j, 6ptn:3, 6pto:i, 6pto:3, 6rqc:3, 6sko:3, 6u0m:3, 5u8s:3, 5u8t:3
43 2k5u:A 181 49 0.1195 0.1050 0.3878 3.1 2ksq:A, 1mr3:F, 4q66:F, 4q66:L, 3tjz:A, 3tjz:D
44 5dgx:A 233 52 0.1006 0.0687 0.3077 3.2
45 5x7j:B 197 32 0.0818 0.0660 0.4062 3.2 5x7j:A, 5x86:B, 5x86:A, 5x8a:B, 5x8b:A, 5x8b:B, 5x8c:A, 5x8c:B, 5x8d:B, 5x8d:A, 5x98:B, 5x98:A, 5x99:A, 5x99:B, 5xal:A, 5xal:B, 5xt8:A, 5xt8:B, 5zax:A, 5zax:B, 5zb0:A, 5zb0:B, 5zb4:A, 5zb4:B
46 6wgi:3 637 43 0.1006 0.0251 0.3721 3.3
47 1k6m:A 432 81 0.1509 0.0556 0.2963 3.6 1c7z:A, 1c7z:B, 1c80:A, 1c80:B, 1c81:A, 1fbt:A, 1fbt:B, 1k6m:B, 1tip:A, 1tip:B
48 5hci:E 259 36 0.0755 0.0463 0.3333 4.8 5hci:A, 5hci:B, 5hci:C, 5hci:D, 5hci:F
49 6nw5:A 331 50 0.1195 0.0574 0.3800 4.8 6nw5:B, 6nw5:C, 6nw5:D
50 2vf7:B 813 40 0.1132 0.0221 0.4500 5.1 2vf8:A
51 1gl9:B 1020 29 0.0629 0.0098 0.3448 5.5 1gl9:C
52 8iuf:V2 225 61 0.1132 0.0800 0.2951 6.4 8j9h:V2, 8j9i:V2, 8j9j:V2
53 3wgc:B 333 37 0.0881 0.0420 0.3784 7.2 3wgb:A, 3wgb:B, 3wgb:C, 3wgb:D, 3wgc:A, 3wgc:C, 3wgc:D
54 4m1m:A 1188 42 0.1069 0.0143 0.4048 7.3 8avy:A, 6fn1:A, 3g60:A, 3g60:B, 3g61:A, 3g61:B, 5koy:A, 5koy:B, 4m1m:B, 4m2s:A, 4m2s:B, 4m2t:A, 4m2t:B, 7otg:A, 8pee:A, 6q81:A, 4q9i:A, 4q9j:A, 4q9k:A, 4q9l:A, 6qee:A, 6ujn:A, 6ujp:A, 6ujr:A, 6ujs:A, 6ujt:A, 6ujw:A, 4xwk:A, 7zk4:A, 7zk5:A, 7zk6:A, 7zk7:A, 7zk8:A, 7zk9:A, 7zka:A, 7zkb:A
55 2vf8:B 835 29 0.0881 0.0168 0.4828 7.4 2vf7:A, 2vf7:C
56 1nks:C 194 52 0.1006 0.0825 0.3077 7.6 1nks:D, 1nks:F
57 2f6r:A 230 35 0.0755 0.0522 0.3429 7.9
58 1g3q:A 237 49 0.1069 0.0717 0.3469 8.3 1g3r:A
59 3kjg:A 254 49 0.1069 0.0669 0.3469 8.7 3kjg:B, 3kjh:A, 3kji:A, 3kji:B
60 8ouw:3 619 54 0.0943 0.0242 0.2778 9.0
61 3p32:A 306 49 0.1006 0.0523 0.3265 9.2 4gt1:A, 3md0:A
62 5och:C 537 42 0.1195 0.0354 0.4524 9.2
63 8s91:D 621 32 0.0943 0.0242 0.4688 9.7 7dpd:A, 7dpd:B, 8s91:E, 8s91:F, 8s94:D, 8s94:F, 8s94:E
64 7qkr:A 1199 49 0.1195 0.0158 0.3878 9.9 7qks:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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