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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
GAVNYLREIHRRKQSDVMRYLLRIRVCEYRQRGECFRVEKPTFLERARTLGYKAKQGYVLYIARVKKGNMKRNYHNGNTR
GKCVNAGINQIKPSLRKQASAEMIAGKKCSNLGVLNSYWVGQDAAYKYYEVIMVDRDHQAIRNDPKINWICKGTMKHREC
RGLTSASRKSRGLGKGVKFNKSKGGSIRSCWRRRNTLVLQKYR

The query sequence (length=203) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7qep:M5 203 203 1.0000 1.0000 1.0000 8.80e-151
2 6rm3:LN0 203 203 0.6995 0.6995 0.6995 3.77e-106
3 6zu5:LN0 203 202 0.6305 0.6305 0.6337 1.45e-89
4 4d5y:N 204 203 0.5616 0.5588 0.5616 1.71e-76 7a01:12, 8a3d:l, 5aj0:AN, 8b5l:N, 8b6c:N, 9bdl:AL15, 9bdn:AL15, 9bdp:AL15, 7bhp:LN, 8bhf:A1, 8bpo:M2, 8btk:BN, 7cpu:LN, 7cpv:LN, 4d67:N, 6d90:N, 6d9j:N, 9f1b:BN, 9f1c:BN, 9f1d:BN, 7f5s:LN, 8fl2:L9, 8fl3:L9, 8fl4:L9, 8fl6:L9, 8fl7:L9, 8fl9:L9, 8fla:L9, 8flb:L9, 8flc:L9, 8fld:L9, 8fle:L9, 8flf:L9, 6frk:N, 6ftg:N, 6fti:N, 6ftj:N, 8g5y:LN, 8g5z:LN, 8g60:LN, 8g61:LN, 8g6j:LN, 8glp:LN, 6gz3:AN, 6gz4:AN, 6gz5:AN, 6hcf:N3, 6hcj:N3, 6hcm:N3, 6hcq:N3, 8idt:U, 8idy:U, 8ie3:U, 8ifd:2H, 8ife:2H, 8ine:U, 8inf:U, 8ink:U, 6ip5:2H, 6ip6:2H, 6ip8:2H, 8ipd:U, 8ipx:U, 8ipy:U, 8ir3:U, 3j7o:N, 3j7p:N, 3j7q:N, 3j7r:N, 3j92:N, 3jag:N, 3jah:N, 3jai:N, 3jaj:N, 3jan:N, 8jdj:S, 8jdk:S, 8jdl:S, 8jdm:S, 8k2c:LN, 5lks:LN, 6lqm:U, 6lsr:U, 6lss:U, 7ls1:H1, 7ls2:H1, 6lu8:U, 5lzs:N, 5lzt:N, 5lzu:N, 5lzv:N, 5lzw:N, 5lzx:N, 5lzy:N, 5lzz:N, 7mdz:N, 6mtb:N, 6mtc:N, 6mtd:N, 6mte:N, 7nfx:N, 7nwg:N3, 7nwh:N, 7nwi:N, 7o7y:BN, 7o7z:BN, 7o80:BN, 7o81:BN, 7obr:N, 8ohd:LN, 8oj0:LN, 8oj5:LN, 8oj8:LN, 6ole:O, 6olf:O, 6olg:AN, 6oli:O, 6olz:AN, 6om0:O, 6om7:O, 7ow7:t, 7oya:N1, 7oyb:N1, 7oyc:N1, 7oyd:N, 8p2k:BN, 6p5i:AN, 6p5j:AN, 6p5k:AN, 6p5n:AN, 8q7z:BN, 8q87:BN, 8qfd:N, 7qgg:O, 8qoi:LN, 7qvp:MN, 7qvp:LN, 7qwq:N, 7qwr:N, 7qws:N, 6qzp:LN, 6r5q:N, 6r6g:N, 6r6p:N, 6r7q:N, 8rjb:N, 8rjc:N, 8rjd:N, 8scb:N, 6sgc:N2, 6swa:M, 5t2c:t, 6t59:N3, 7tm3:N, 7toq:AL15, 7tor:AL15, 7tut:N, 7ucj:N, 7uck:N, 4ug0:LN, 4ujc:BN, 4ujd:AN, 4uje:CN, 4v5z:Bm, 4v6x:CN, 6w6l:O, 6xa1:LN, 7xnx:LN, 7xny:LN, 8xsx:LN, 8xsy:LN, 8xsz:LN, 6y0g:LN, 8y0w:LN, 8y0x:LN, 6y2l:LN, 6y57:LN, 6y6x:LN, 8yoo:LN, 8yop:LN, 6z6l:LN, 6z6m:LN, 6z6n:LN, 7zjw:LQ, 7zjx:LQ, 6zm7:LN, 6zme:LN, 6zmi:LN, 6zmo:LN, 6zvk:12
5 8p5d:LN0 203 203 0.5468 0.5468 0.5468 2.31e-74 8p60:LN0, 8p60:KN0, 7qca:LN0
6 4v6w:CN 203 195 0.5271 0.5271 0.5487 1.97e-73 6xu6:CN, 6xu7:CN, 6xu8:CN
7 8aaf:A 203 203 0.5369 0.5369 0.5369 2.22e-73 8agt:A, 8agu:A, 8agv:A, 8agw:A, 8agx:A, 8agz:A, 5apn:N, 5apo:N, 7azy:R, 7b7d:LP, 8bip:LN, 8bjq:LN, 8bn3:M5, 8bqd:AQ, 8bqx:AQ, 7btb:N, 8ccs:QQ, 8cdl:QQ, 8cdr:QQ, 8ceh:QQ, 8cf5:QQ, 8cg8:QQ, 8cgn:QQ, 8civ:QQ, 8cku:QQ, 8cmj:QQ, 5dat:M5, 5dat:m5, 5dc3:M5, 5dc3:m5, 5dge:M5, 5dge:m5, 5dgf:M5, 5dgf:m5, 5dgv:M5, 5dgv:m5, 6elz:N, 6em5:N, 8eub:AN, 8evp:AN, 8evq:AN, 8evr:AN, 8evs:AN, 8evt:AN, 8ewb:AN, 8ewc:AN, 5fci:M5, 5fci:m5, 5fcj:M5, 5fcj:m5, 6ft6:N, 5gak:P, 6gq1:N, 6gqb:N, 6gqv:N, 5h4p:N, 6hd7:P, 8hfr:No, 6hhq:v, 6hhq:CP, 5i4l:M5, 5i4l:m5, 6i7o:AQ, 6i7o:XQ, 5it7:NN, 3j6x:55, 3j6y:55, 3j77:65, 3j78:65, 3jct:N, 5jcs:N, 5juo:S, 5jup:S, 5jus:S, 5jut:S, 5juu:S, 8k2d:LN, 8k82:LN, 5lyb:M5, 5lyb:m5, 5m1j:N5, 6m62:N, 5mc6:AQ, 5mei:v, 5mei:CP, 7mpi:AN, 7mpj:AN, 6n8j:N, 6n8k:N, 6n8l:N, 6n8m:a, 6n8n:a, 6n8o:a, 7n8b:AN, 7nac:N, 5ndg:M5, 5ndg:m5, 5ndv:M5, 5ndv:m5, 5ndw:M5, 5ndw:m5, 7nrc:LP, 7nrd:LP, 5obm:M5, 5obm:m5, 7of1:N, 7oh3:N, 7ohq:N, 7ohv:N, 6oig:N, 5on6:v, 5on6:CP, 7osa:eL15, 7osm:eL15, 8p8m:JV, 8p8n:JV, 8p8u:JV, 8pfr:JV, 6q8y:AQ, 6qik:O, 6qt0:O, 6qtz:O, 7r7a:N, 6r84:p, 6r86:p, 6r87:p, 6ri5:O, 7rr5:LN, 6rzz:O, 6s05:O, 6s47:AP, 6snt:t, 6sv4:AQ, 6sv4:XQ, 6sv4:zQ, 6t4q:LN, 5t62:a, 5t6r:a, 6t7i:LN, 6t7t:LN, 6t83:Ny, 6t83:Pa, 5tbw:v, 5tbw:CP, 6tb3:AQ, 5tga:M5, 5tga:m5, 5tgm:M5, 5tgm:m5, 6tnu:AQ, 7too:AL15, 7top:AL15, 7u0h:N, 4u3m:M5, 4u3m:m5, 4u3n:M5, 4u3n:m5, 4u3u:M5, 4u3u:m5, 4u4n:M5, 4u4n:m5, 4u4o:M5, 4u4o:m5, 4u4q:M5, 4u4q:m5, 4u4r:M5, 4u4r:m5, 4u4u:M5, 4u4u:m5, 4u4y:M5, 4u4y:m5, 4u4z:M5, 4u4z:m5, 4u50:M5, 4u50:m5, 4u51:M5, 4u51:m5, 4u52:M5, 4u52:m5, 4u53:M5, 4u53:m5, 4u55:M5, 4u55:m5, 4u56:M5, 4u56:m5, 4u6f:M5, 4u6f:m5, 7ug6:N, 7uoo:N, 7uqb:N, 7uqz:N, 6uz7:AN, 7v08:N, 4v4b:BL, 4v6i:BP, 4v7f:O, 4v7h:BL, 4v7r:BO, 4v7r:DO, 4v88:BN, 4v88:DN, 4v8t:N, 4v8y:BN, 4v8z:BN, 8v87:N, 4v91:N, 6woo:N, 6xiq:N, 6xir:N, 8y0u:LN, 6ylg:N, 6ylh:N, 6yly:N, 7z34:N, 6z6j:LN, 6z6k:LN, 7zpq:BM, 7zrs:BM, 7zs5:BO, 7zuw:BM, 7zux:EM, 7zw0:LQ
8 7olc:LN 202 203 0.5665 0.5693 0.5665 5.09e-73 8i9p:LN, 8i9r:LN, 8i9t:LN, 8i9v:LN, 8i9w:LN, 8i9x:LN, 8i9y:LN, 8i9z:LN, 8ia0:LN, 7old:LN, 8oo0:LN, 8pv1:LN, 8pv2:LN, 8pv3:LN, 8pv4:LN, 8pv5:LN, 8pv6:LN, 8pv7:LN, 8pv8:LN, 8pvk:LN, 8pvl:LN, 7r81:P1, 7z3n:LN, 7z3o:LN
9 8c3a:v 203 203 0.5320 0.5320 0.5320 1.10e-70 8c3a:BI, 8cq7:v, 8cq7:BI, 8cqw:v, 8cqw:BI, 8cre:v, 8cre:BI, 8oeq:v, 8oeq:BI, 7pzy:v, 7q08:v, 7q0f:v, 7q0p:v, 7q0r:v, 8q5i:v
10 8azw:F 203 204 0.5468 0.5468 0.5441 1.16e-68 8b2l:F3, 7qiw:P, 7qiz:P
11 8eug:N 200 203 0.5222 0.5300 0.5222 1.03e-67 8eui:N
12 5xxb:M 202 206 0.5271 0.5297 0.5194 1.65e-66
13 8fkp:L9 183 203 0.5172 0.5738 0.5172 2.92e-66 8fkq:L9, 8fkr:L9, 8fks:L9, 8fkt:L9, 8fku:L9, 8fkv:L9, 8fkw:L9, 8fkx:L9, 8fky:L9, 8fkz:L9, 8ir1:U
14 8ip8:HA 203 204 0.5172 0.5172 0.5147 5.60e-66 8ipa:HA, 8ipb:HA, 8jiv:CN, 4v3p:LP, 4v7e:CN
15 9bh5:CN 203 203 0.5320 0.5320 0.5320 6.38e-64 9cai:CN
16 7bt6:N 183 203 0.4926 0.5464 0.4926 4.38e-63 6c0f:N, 6cb1:N, 8e5t:N, 6em1:N, 6em3:N, 6em4:N, 7ohp:N, 7ohr:N, 7ohs:N, 7ohu:N, 7ohw:N, 7ohx:N, 7ohy:N, 7r6q:N, 8v83:N, 8v84:N, 6ylx:N, 5z3g:R
17 3j79:P 204 204 0.5074 0.5049 0.5049 7.66e-63 3jbn:AP, 3jbo:AP, 3jbp:AP, 8tpu:AP, 5umd:P
18 5xy3:N 202 203 0.4729 0.4752 0.4729 1.94e-56
19 7pwg:N 204 204 0.5222 0.5196 0.5196 1.51e-55 8br8:LO, 8brm:LO, 8bsi:LO, 8bsj:LO, 8btd:LO, 8btr:LO, 8fru:N, 7pwo:N2
20 4v8p:BL 203 203 0.4877 0.4877 0.4877 3.82e-55 4v8p:CL, 4v8p:EL, 4v8p:GL
21 8esq:N 166 203 0.4680 0.5723 0.4680 1.22e-54 8esr:N, 8etc:N, 8etg:N, 8eth:N, 8eti:N, 8etj:N, 8eup:N, 8euy:N, 8ev3:N
22 6zj3:Lb 203 204 0.4877 0.4877 0.4853 2.62e-54
23 8a3w:M 203 204 0.4877 0.4877 0.4853 6.51e-52 8a98:M, 6az3:M, 3jcs:M, 8ovj:M, 8rxh:LM, 8rxx:LM, 5t2a:O, 5t5h:Q
24 8ova:BQ 203 173 0.4236 0.4236 0.4971 1.52e-46 8ove:BQ, 4v8m:BQ
25 4v4n:AM 194 183 0.4089 0.4278 0.4536 7.77e-43 6skf:BP, 6skg:BP, 6th6:BP, 4v6u:BM
26 3cxc:L 194 178 0.3645 0.3814 0.4157 3.16e-37 1jj2:L, 1k73:N, 1k8a:N, 1k9m:N, 1kc8:N, 1kd1:N, 1kqs:L, 1m1k:N, 1m90:N, 1n8r:N, 1nji:N, 3ow2:L, 1q7y:N, 1q81:N, 1q82:N, 1q86:N, 1qvf:L, 1qvg:L, 1w2b:L
27 8hku:L15E 169 158 0.3547 0.4260 0.4557 2.99e-35 8hkv:L15E, 8hky:L15E, 8hkz:L15E, 8hl1:L15E, 8hl2:L15E, 8hl3:L15E, 8hl4:L15E, 8hl5:L15E
28 4v9f:M 195 189 0.3695 0.3846 0.3968 1.39e-34 3cc2:M, 3cc4:M, 3cc7:M, 3cce:M, 3ccj:M, 3ccl:M, 3ccm:M, 3ccq:M, 3ccr:M, 3ccs:M, 3ccu:M, 3ccv:M, 3cd6:M, 3cma:M, 3cme:M, 3cpw:L, 3g4s:M, 3g6e:M, 3g71:M, 3i55:M, 3i56:M, 2otj:M, 2otl:M, 2qa4:M, 2qex:M, 1s72:M, 1vq4:M, 1vq5:M, 1vq6:M, 1vq7:M, 1vq8:M, 1vq9:M, 1vqk:M, 1vql:M, 1vqm:M, 1vqn:M, 1vqo:M, 1vqp:M, 1yhq:M, 1yi2:M, 1yij:M, 1yit:M, 1yj9:M, 1yjn:M, 1yjw:M
29 1ffk:I 194 169 0.3399 0.3557 0.4083 2.66e-31
30 7r6k:N 92 165 0.2463 0.5435 0.3030 5.23e-13
31 2ygq:A 241 48 0.0640 0.0539 0.2708 2.1
32 5m8e:A 323 34 0.0591 0.0372 0.3529 2.5 5m8e:B
33 3acs:A 822 89 0.1182 0.0292 0.2697 3.2 3acs:B, 3act:A, 3act:B, 3afj:A, 3afj:B, 2cqs:A, 2cqs:B, 2cqt:A, 2cqt:B, 3qfy:A, 3qfy:B, 3qfz:A, 3qfz:B, 3qg0:A, 3qg0:B
34 8aaf:I 136 103 0.1281 0.1912 0.2524 4.9 8agt:I, 8agu:I, 8agv:I, 8agw:I, 8agx:I, 8agz:I, 5apn:V, 5apo:V, 7azy:c, 7b7d:Lr, 8bip:LV, 8bjq:LV, 8bn3:N3, 8bqd:AB, 8bqx:AB, 7bt6:V, 7btb:V, 6c0f:V, 8ccs:H, 8cdl:H, 8cdr:H, 8ceh:H, 8cf5:H, 8cg8:H, 8cgn:H, 8civ:H, 8cku:H, 8cmj:H, 5dat:N3, 5dat:n3, 5dc3:N3, 5dc3:n3, 5dge:N3, 5dge:n3, 5dgf:N3, 5dgf:n3, 5dgv:N3, 5dgv:n3, 6elz:V, 6em1:V, 6em5:V, 8eub:AV, 8evp:AV, 8evq:AV, 8evr:AV, 8evs:AV, 8evt:AV, 8ewb:AV, 8ewc:AV, 5fci:N3, 5fci:n3, 5fcj:N3, 5fcj:n3, 6ft6:V, 5gak:X, 6gq1:V, 6gqb:V, 6gqv:V, 5h4p:V, 6hd7:X, 8hfr:V5, 6hhq:6, 6hhq:CX, 5i4l:N3, 5i4l:n3, 6i7o:AB, 6i7o:XB, 5it7:VV, 3j16:I, 3j6x:63, 3j6y:63, 3j77:73, 3j78:73, 3jct:V, 5jcs:V, 5juo:AA, 5jup:AA, 5jus:AA, 5jut:AA, 5juu:AA, 8k2d:LV, 8k82:LV, 5lyb:N3, 5lyb:n3, 5m1j:V5, 6m62:V, 5mc6:AB, 5mei:l2, 5mei:CX, 7mpi:AV, 7mpj:AV, 6n8j:V, 6n8k:V, 6n8l:V, 6n8m:i, 6n8n:i, 6n8o:i, 7n8b:AV, 7nac:V, 7naf:V, 5ndg:N3, 5ndg:n3, 5ndv:N3, 5ndv:n3, 5ndw:N3, 5ndw:n3, 7nrc:LX, 7nrd:LX, 5obm:N3, 5obm:n3, 7of1:V, 7oh3:V, 7ohp:V, 7ohq:V, 7ohr:V, 7ohs:V, 7oht:V, 7ohu:V, 7ohv:V, 7ohy:V, 6oig:V, 5on6:lR, 5on6:CX, 7osa:uL14, 7osm:uL14, 8p8m:QV, 8p8n:QV, 8p8u:QV, 8pfr:QV, 6q8y:AB, 6qik:L, 6qt0:L, 6qtz:L, 7r7a:V, 6r84:x, 6r86:x, 6r87:x, 6ri5:L, 7rr5:LV, 6rzz:L, 6s05:L, 6s47:AX, 6snt:AB, 6sv4:AB, 6sv4:XB, 6sv4:zB, 6t4q:LV, 5t62:i, 5t6r:i, 6t7i:LV, 6t7t:LV, 6t83:Vy, 6t83:G, 5tbw:6, 5tbw:CX, 6tb3:AB, 5tga:N3, 5tga:n3, 5tgm:N3, 5tgm:n3, 6tnu:AB, 7too:AL23, 7top:AL23, 7u0h:V, 4u3m:N3, 4u3m:n3, 4u3n:N3, 4u3n:n3, 4u3u:N3, 4u3u:n3, 4u4n:N3, 4u4n:n3, 4u4o:N3, 4u4o:n3, 4u4q:N3, 4u4q:n3, 4u4r:N3, 4u4r:n3, 4u4u:N3, 4u4u:n3, 4u4y:N3, 4u4y:n3, 4u4z:N3, 4u4z:n3, 4u50:N3, 4u50:n3, 4u51:N3, 4u51:n3, 4u52:N3, 4u52:n3, 4u53:N3, 4u53:n3, 4u55:N3, 4u55:n3, 4u56:N3, 4u56:n3, 4u6f:N3, 4u6f:n3, 7ug6:V, 7uoo:V, 7uqb:V, 7uqz:V, 6uz7:AV, 7v08:V, 4v4b:BR, 4v6i:BM, 4v7f:L, 4v7h:BR, 4v7r:BU, 4v7r:DU, 4v88:BV, 4v88:DV, 4v8t:V, 4v8y:BV, 4v8z:BV, 8v83:V, 8v84:V, 8v87:V, 4v91:V, 6woo:V, 2x7n:C, 6xiq:V, 6xir:V, 8y0u:LV, 6ylg:V, 6ylh:V, 6ylx:V, 6yly:V, 7z34:V, 6z6j:LV, 6z6k:LV, 7zpq:BU, 7zrs:BU, 7zs5:BW, 7zuw:BU, 7zux:EU, 7zw0:LY
35 5e26:B 362 52 0.0591 0.0331 0.2308 6.5 5e26:A, 5e26:C, 5e26:D
36 5ur2:B 959 43 0.0739 0.0156 0.3488 9.2 5ur2:A, 5ur2:C, 5ur2:D
37 3qde:A 811 106 0.1330 0.0333 0.2547 9.2 8ho8:A, 8ho8:B, 3qde:B
38 3i39:X 635 20 0.0542 0.0173 0.5500 9.5 3b51:X, 3b52:X, 3b53:X, 7err:A, 5fle:X, 8omx:X, 8omy:X, 8on0:X, 8on1:X, 8on2:X, 8on3:X, 1su6:A, 1su7:A, 1su8:A, 1suf:A, 4udx:X, 4udy:X, 8x9d:A, 8x9e:A, 8x9f:A, 8x9g:A, 8x9h:A, 7xdm:A, 7xdn:A, 7xdp:A, 2yiv:X, 7zx3:X, 7zx5:X, 7zx6:X, 7zxc:X, 7zxj:X, 7zxl:X, 7zxx:X, 7zy1:X
39 4ote:B 240 174 0.2118 0.1792 0.2471 9.7 4ote:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218