Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
GANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEG
LNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVDYKSCAHDWVYE

The query sequence (length=152) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7kpf:A 152 151 0.9934 0.9934 1.0000 2.74e-112 3bbb:B, 3bbb:C, 3bbb:E, 3bbb:F, 3bbf:A, 3bbf:B, 3bbf:C, 3bbf:D, 3bbf:E, 3bbf:F, 7kpf:B, 7kpf:C, 1nue:A, 1nue:B, 1nue:C, 1nue:D, 1nue:E, 1nue:F, 8pie:A, 8pie:B, 8pie:C, 8pie:D, 8pie:E, 8pie:F, 8pyw:A, 8pyw:B, 8pyw:C, 8pyw:D, 8pyw:E, 8pyw:F
2 8oov:B 157 151 0.8750 0.8471 0.8808 1.97e-99 1be4:A, 1be4:B, 1be4:C, 1bhn:A, 1bhn:B, 1bhn:C, 1bhn:D, 1bhn:E, 1bhn:F, 4eno:A, 4eno:B, 2hvd:A, 2hvd:B, 2hvd:C, 2hve:A, 2hve:B, 2hve:C, 8oov:A, 8oov:C, 1ucn:A, 1ucn:B, 1ucn:C, 5ui4:A, 5ui4:B, 5ui4:C, 5ui4:D, 5ui4:E, 5ui4:F, 7zl8:A, 7zl8:B, 7zl8:C, 7zl8:D, 7zl8:E, 7zl8:F, 7zl8:G, 7zl8:H, 7zl8:I, 7zl8:J, 7zl8:K, 7zl8:L, 7zlw:A, 7zlw:B, 7zlw:C, 7zlw:D, 7zlw:F, 7ztk:A, 7ztk:B, 7ztk:C, 7ztk:D, 7ztk:E, 7ztk:F
3 7kpf:F 135 151 0.8816 0.9926 0.8874 2.31e-93
4 4uof:A 151 148 0.7434 0.7483 0.7635 5.38e-86 4uof:B, 4uof:C, 4uog:A, 4uog:B, 4uog:C, 4uoh:B, 4uoh:C
5 6xpw:C 158 148 0.6711 0.6456 0.6892 7.39e-76 6xp7:A, 6xp7:B, 6xp7:C, 6xps:A, 6xps:B, 6xps:C, 6xpt:A, 6xpt:B, 6xpt:C, 6xpt:E, 6xpt:G, 6xpt:H, 6xpu:A, 6xpu:B, 6xpu:C, 6xpv:A, 6xpv:B, 6xpv:C, 6xpv:E, 6xpv:G, 6xpv:H, 6xpw:A, 6xpw:B, 6xpw:E, 6xpw:G, 6xpw:H
6 5bxi:B 153 148 0.6513 0.6471 0.6689 3.00e-75 5bxi:A, 5bxi:C, 5bxi:I
7 8qvz:C 155 148 0.6382 0.6258 0.6554 8.50e-75 8qvz:A, 8qvz:B, 8qvz:D, 8qvz:E, 8qvz:F, 8qw0:A, 8qw0:B, 8qw0:C, 8qw0:D, 8qw0:E, 8qw0:F, 8qw0:G, 8qw0:H, 8qw0:I, 8qw0:J, 8qw0:K, 8qw0:L, 8qw1:A, 8qw1:B, 8qw1:C, 8qw1:D, 8qw1:E, 8qw1:F, 8qw2:A, 8qw2:B, 8qw2:C, 8qw2:D, 8qw2:E, 8qw2:F, 8qw3:A, 8qw3:B, 8qw3:C, 8qw3:D, 8qw3:E, 8qw3:F, 1zs6:A, 1zs6:B, 1zs6:D
8 4fkx:A 153 148 0.6579 0.6536 0.6757 1.69e-73 4f4a:A, 4f4a:B, 4f4a:C, 4fkx:B, 4fkx:C, 4fky:A, 4fky:B, 4fky:C
9 3ngs:A 151 148 0.6382 0.6424 0.6554 1.31e-72 4kpc:A, 4kpc:B, 3ngs:C, 3ngt:A, 3ngt:B, 3ngt:C, 3ngt:D, 3ngt:E, 3ngt:F, 3ngt:G, 3ngt:H, 3ngt:I, 3ngt:J, 3ngt:K, 3ngt:M, 3ngt:N, 3ngu:A, 3ngu:B
10 5kk8:A 149 148 0.5921 0.6040 0.6081 1.99e-66 5kk8:B
11 5u2i:B 151 148 0.5789 0.5828 0.5946 2.02e-64 5u2i:D
12 4cp5:A 151 138 0.5724 0.5762 0.6304 5.51e-60 1b4s:A, 1b4s:B, 1b4s:C, 1b99:A, 1b99:C, 1b99:D, 1b99:E, 2bef:A, 2bef:B, 2bef:C, 1bux:A, 1bux:B, 1bux:C, 4cp5:B, 4cp5:C, 4cp5:D, 4cp5:E, 4cp5:F, 1f3f:A, 1f3f:B, 1f3f:C, 1f6t:A, 1f6t:B, 1f6t:C, 3fkb:A, 3fkb:B, 3fkb:C, 3fkb:D, 3fkb:E, 3fkb:F, 1hiy:A, 1hiy:B, 1hiy:C, 1kdn:A, 1kdn:B, 1kdn:C, 1lwx:A, 1lwx:B, 1lwx:C, 1mn7:A, 1mn7:B, 1mn9:A, 1mn9:B, 1mn9:C, 1ndc:A, 1ndp:A, 1ndp:B, 1pae:X, 1s5z:A
13 1s59:A 153 150 0.5066 0.5033 0.5133 1.77e-58 1s59:C
14 1wkk:A 137 137 0.5066 0.5620 0.5620 1.58e-57 1wkl:A, 1wkl:B
15 2az1:A 155 150 0.5000 0.4903 0.5067 6.98e-54 2az1:C, 2az1:D, 2az3:A, 2az3:B, 2az3:F, 2az3:C, 2az3:D, 2az3:E, 2az3:G, 2az3:H, 2az3:I
16 3q86:A 149 149 0.4803 0.4899 0.4899 2.25e-52 3q86:B, 3q89:B, 3q89:E, 3q8u:A, 3q8u:B, 3q8u:C, 3q8u:D, 3q8u:E, 3q8u:F, 3q8v:A, 3q8v:B, 3q8v:D, 3q8y:A, 3q8y:B, 3q8y:C, 3q8y:D, 3q8y:E, 3q8y:F, 3q8y:G, 3q8y:H
17 2dya:B 155 154 0.5132 0.5032 0.5065 5.94e-50 2dxd:A, 2dxd:B, 2dxe:A, 2dxf:A, 2dy9:A, 2dya:A
18 1nhk:R 144 139 0.4211 0.4444 0.4604 1.62e-41 1nhk:L, 1nlk:R, 1nlk:L
19 4s0m:D 143 136 0.4145 0.4406 0.4632 5.21e-40 5yol:E, 5yol:H
20 3ejm:A 134 135 0.3947 0.4478 0.4444 5.20e-37 3b6b:A, 3b6b:B, 3b6b:C, 3b6b:D, 3b6b:E, 3b6b:F, 2b8q:A, 2b8q:B, 2b8q:C, 2b8q:D, 2b8q:E, 2b8q:F, 3ddi:A, 3ddi:B, 3dkd:A, 3dkd:B, 3ee3:A, 3ee3:B, 3ee3:C, 3ee3:D, 3ee3:E, 3ee3:F, 3eic:A, 3eic:B, 3eic:C, 3eic:D, 3eic:E, 3eic:F, 3ejm:B, 3em1:A, 3em1:B, 3emt:A, 3emt:B, 3ena:A, 3ena:B, 3etm:A, 3etm:B, 3evm:A, 3evm:B, 3evo:A, 3evo:B, 3evw:A, 3evw:B, 3evw:C, 3evw:D, 3evw:E, 3evw:F, 3fbb:A, 3fbb:B, 3fbb:C, 3fbb:D, 3fbb:E, 3fbb:F, 3fbc:A, 3fbc:B, 3fbc:C, 3fbc:D, 3fbc:E, 3fbc:F, 3fbe:A, 3fbe:B, 3fbe:C, 3fbe:D, 3fbe:E, 3fbe:F, 3fbf:A, 3fbf:B, 3fbf:C, 3fbf:D, 3fbf:E, 3fbf:F, 3fc9:A, 3fc9:B, 3fc9:C, 3fc9:D, 3fc9:E, 3fc9:F, 3fcw:A, 3fcw:B, 3fcw:C, 3fcw:D, 3fcw:E, 3fcw:F, 3g2x:A, 3g2x:B, 3g2x:C, 3g2x:D, 3g2x:E, 3g2x:F, 3gp9:A, 3gp9:B, 3gp9:C, 3gp9:D, 3gp9:E, 3gp9:F, 3gpa:A, 3gpa:C, 3gpa:E, 3gpa:B, 3gpa:D, 3gpa:F
21 4ek2:A 142 134 0.3553 0.3803 0.4030 2.91e-32 4hr2:A, 4hr2:B
22 4dz6:A 168 162 0.3882 0.3512 0.3642 8.36e-31 4dz6:B, 4dz6:C, 4dz6:D, 4dz6:E, 4dz6:F
23 3bh6:B 314 76 0.1316 0.0637 0.2632 0.68 3bh7:B
24 6m0q:A 504 57 0.1118 0.0337 0.2982 1.1 4fas:A, 4fas:C, 4fas:B, 1fgj:A, 1fgj:B, 6m0p:A, 6m0p:C, 6m0p:E, 6m0q:C, 6m0q:E, 6m0q:G, 6m0q:I, 6m0q:K, 4n4n:A, 4n4n:C, 4n4n:E, 4n4o:A, 4n4o:C, 4n4o:E
25 7tby:A 1788 46 0.0724 0.0062 0.2391 1.7 7tc0:A
26 3mia:A 325 72 0.0921 0.0431 0.1944 2.8 4bcf:A, 4bcg:A, 4bch:A, 4bci:A, 4bcj:A, 3blq:A, 3blr:A, 6gzh:A, 8i0l:A, 4imy:A, 4imy:C, 4imy:E, 8k5r:A, 3lq5:A, 3my1:A, 7nwk:A, 4ogr:A, 4ogr:E, 4ogr:I, 3tn8:A, 6w9e:A, 6z45:A
27 6kif:J 41 16 0.0461 0.1707 0.4375 3.6 6kif:T, 6kif:l, 6kig:J, 6kig:T, 6kig:l
28 7roq:A 1831 39 0.0658 0.0055 0.2564 3.9
29 3or1:B 385 48 0.1118 0.0442 0.3542 3.9 3or1:E, 3or2:B, 3or2:E
30 7tbw:A 1928 39 0.0658 0.0052 0.2564 4.0
31 7opl:A 1070 80 0.1316 0.0187 0.2500 6.0 6as7:A, 9c8v:C, 8d96:C, 8d9d:C, 5exr:C, 5exr:G, 5iud:A, 5iud:D, 5iud:G, 5iud:J, 7n2m:A, 4q5v:A, 4q5v:E, 4qcl:A, 8qj7:A, 7u5c:C, 8vy3:C, 4y97:B, 4y97:D, 4y97:F, 4y97:H
32 4xfe:A 306 86 0.1316 0.0654 0.2326 6.2
33 8c2z:A 334 41 0.0724 0.0329 0.2683 9.4

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218