BioLiP

>protein
GAMTQGLIEVERKFAPGPDTEERLQELGATLEHRVTFRDTYYDTSELSLMLSDHWLRQREGSGWELKCPGVSGPHNEYVE
VTSEAAIVAQLFELLGSGEQKPAGVAAVLGSLKLQEVASFITTRSSWKLALSEPQLTIDLDSADFGYAVGEVEAMVHEKA
EVPAALEKIITVSSMLGVPAQEEAPAKLMVYLQRFRPLDYQRLLEAAS

The query sequence (length=208) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5a65:A	208	208	1.0000	1.0000	1.0000	6.97e-153	5a64:A, 5a64:B, 5a65:B
2	3tvl:A	204	206	0.7356	0.7500	0.7427	3.12e-104	3tvl:B
3	1p5r:A	427	111	0.1538	0.0749	0.2883	0.55	1p5r:B, 1t3z:A, 1t3z:B, 1t4c:A, 1t4c:B, 1vgq:A, 1vgq:B, 1vgr:A, 1vgr:B, 2vjk:A, 2vjk:B, 2vjl:A, 2vjl:B, 2vjm:A, 2vjm:B, 2vjo:A, 2vjo:B
4	8qwt:A	331	186	0.1971	0.1239	0.2204	1.3
5	6vi1:B	232	92	0.1058	0.0948	0.2391	3.7	9aur:H, 9aus:H, 9aus:A, 6b14:H, 6b3k:H, 6b9y:B, 6bae:B, 6bah:B, 9cmi:H, 8d29:A, 8d29:H, 8d29:D, 8d29:G, 6db8:H, 6db9:H, 8dk7:B, 8dk7:D, 9dn4:A, 9dn4:D, 8dp3:H, 4ioi:B, 3ivk:H, 3ivk:A, 4kzd:H, 4kze:H, 7mlx:H, 6mwn:C, 6mwn:H, 3p0v:H, 3p0v:I, 7pgb:a, 7pgb:X, 7pgb:i, 7pgb:m, 7pgb:U, 4q9q:H, 4q9r:H, 2r8s:H, 8sh5:H, 6snh:H, 6sni:H, 7stf:H, 7szu:H, 8t29:A, 8t2a:A, 8t2b:A, 8t2o:A, 7u0y:H, 8u4v:H, 5u5f:B, 5u5m:B, 8u5b:H, 5u6a:B, 6u8d:H, 6u8k:H, 6u8k:D, 6u8k:F, 8uiw:H, 8uiw:A, 6uj9:H, 8uta:H, 8uta:A, 6vi1:E, 6vi1:F, 6vi1:H, 6vi1:J, 6vi1:L, 8vm8:H, 8vm9:H, 8vm9:A, 8vma:A, 8vma:H, 8vmb:H, 6w51:O, 6x5m:H, 6x5m:h, 6x5n:H, 6x5n:h, 4xgz:A, 4xgz:C, 4xgz:G, 4xgz:H, 4xgz:J, 4xgz:M, 4xgz:O, 4xgz:Q, 4xgz:S, 4xgz:U, 4xgz:W, 4xh2:A, 4xh2:C, 4xh2:E, 4xh2:G, 4xh2:H, 4xh2:J, 6xjq:H, 6xjq:C, 6xjw:C, 6xjw:H, 6xjy:H, 6xjy:C, 6xjz:H, 6xjz:C
6	6p8d:A	211	27	0.0577	0.0569	0.4444	6.1	6p8d:D
7	4k50:A	460	37	0.0625	0.0283	0.3514	9.4	4k50:I, 4k50:E, 4k50:M, 1tp7:A

[Back]