BioLiP

>protein
FYFQPFSKKQLKVLTWWRKASPVSDKDGIICDGSIRAGKTIVMSFSYVMWAMDTFNEQNFGMAGKTIGALRRNVITPLKR
MLKSRGYRVKDHRADNYLTITFKGKTNYFYLFGGKDESSQDLIQGITLAGMFFDEVALMPESFVNQATARCSVDGAKLWF
NCNPAGPYHWFKVEYLDKLDEKNLLHLHFTMDDNLSLSKQVKERYQRMYKGVFYQRYILGLWVLAEGIIYDMFDQDEHVV
PTVPRPYEKYYVSCDYGTQNPTTFGLWGLYNGVWYKVKEYHYDGRKENKQKTDQEYYEDLMKFIEDIEKHKFKGVIVDPS
AASFIALLRQKGIKVIKAKNDVLDGIRNVATALNKKMILYNDCCKETFREYSSYVWDEKAAERGEDKPVKQNDHQLDADR
YFVNTILFG

The query sequence (length=409) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5oea:B	409	409	1.0000	1.0000	1.0000	0.0	5oea:A, 5oea:D, 5oea:E, 5oeb:B
2	8sgh:A	844	89	0.0538	0.0261	0.2472	0.11	7cyl:A, 4fdd:A, 4fq3:A, 2h4m:A, 5j3v:A, 5j3v:B, 4jlq:A, 4oo6:A, 2ot8:A, 5tqc:A, 7vpw:A, 5yvi:A, 2z5k:A, 2z5m:A, 2z5n:A, 2z5o:A
3	5yvg:A	830	84	0.0489	0.0241	0.2381	0.80	2h4m:B, 2ot8:B, 5yvh:A
4	7ua3:A	4443	61	0.0440	0.0041	0.2951	1.1	7ua3:B, 7ua3:C, 7ua3:D, 7ua4:A, 7ua4:B, 7ua4:C, 7ua4:D
5	8uxl:A	4232	61	0.0489	0.0047	0.3279	2.1	7u9q:A, 7u9q:D, 7u9q:B, 7u9q:C, 7u9r:A, 7u9r:D, 7u9r:B, 7u9r:C, 7u9t:A, 7u9t:D, 7u9t:B, 7u9t:C, 7u9x:A, 7u9x:B, 7u9x:C, 7u9x:D, 7u9z:A, 7u9z:B, 7u9z:C, 7u9z:D, 7ua1:A, 7ua1:B, 7ua1:C, 7ua1:D, 7ua5:A, 7ua5:B, 7ua5:C, 7ua5:D, 7ua9:A, 7ua9:B, 7ua9:C, 7ua9:D, 8uq2:A, 8uq2:B, 8uq2:C, 8uq2:D, 8uq3:A, 8uq3:B, 8uq3:C, 8uq3:D, 8uq4:A, 8uq4:B, 8uq4:C, 8uq4:D, 8uq5:A, 8uq5:B, 8uq5:C, 8uq5:D, 8uxc:A, 8uxc:B, 8uxc:C, 8uxc:D, 8uxe:A, 8uxe:B, 8uxe:C, 8uxe:D, 8uxf:A, 8uxf:B, 8uxf:C, 8uxf:D, 8uxg:A, 8uxg:B, 8uxg:C, 8uxg:D, 8uxl:B, 8uxl:C, 8uxl:D, 8uxm:A, 8uxm:B, 8uxm:C, 8uxm:D
6	8uxh:A	4004	61	0.0489	0.0050	0.3279	2.2	8uxh:B, 8uxh:C, 8uxh:D, 8uxi:A, 8uxi:B, 8uxi:C, 8uxi:D
7	4zcf:A	616	167	0.0954	0.0633	0.2335	2.3	4zcf:B
8	6hwj:A	428	69	0.0587	0.0561	0.3478	2.3	6hwj:B, 6hwk:A, 6hwk:C, 6hwk:D, 6hwl:B
9	8dtz:A	4061	88	0.0562	0.0057	0.2614	7.0	8dtz:B, 8dtz:C, 8dtz:D
10	8dty:A	4004	88	0.0562	0.0057	0.2614	7.1	8dty:B, 8dty:C, 8dty:D
11	7kgz:B	634	53	0.0416	0.0268	0.3208	7.1	7kgz:A
12	6wou:A	3921	88	0.0562	0.0059	0.2614	7.5	6wou:B, 6wou:C, 6wou:D, 6wov:A, 6wov:B, 6wov:C, 6wov:D
13	4gun:A	205	57	0.0416	0.0829	0.2982	7.6	4gun:B, 4gun:C, 4gun:D, 4gun:E, 4gun:F, 4gun:G, 4gun:H, 4gun:I, 4gun:J, 4gun:K, 4gun:L, 4gun:M, 4gun:N, 4gun:O, 4gun:P, 3qvn:A
14	4pfx:A	277	42	0.0293	0.0433	0.2857	7.7	4phr:A, 4phs:A
15	6znq:B	711	31	0.0318	0.0183	0.4194	9.5	6znp:B

[Back]