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BioLiP
>protein
FSHIPSYAEYERAKSIYEKVLADSKNGGVTQQELAAYRKAANIAKSVFDRDLAVQKKLDSMAERAMTTMYKEARVTDRRA
KLVSSLHALLFSMLKKIDSEKLNVLFDQANSGVVPLATVPIVCSNKLTLVIPDPETWVKCVEGVHVTYSTVVWNIDCVTD
ADGTELHPTSTGSGLTYCISGDNIAWPLKVNLTRN

The query sequence (length=195) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 9cpo:B 195 195 1.0000 1.0000 1.0000 8.12e-147 9cpo:D
2 7uo9:B 190 194 0.3949 0.4053 0.3969 2.40e-47 7cxm:D, 7cxn:B, 7cxn:D, 7cyq:D, 7dok:G, 7dte:B, 7dte:D, 7ed5:D, 7ed5:B, 7egq:B, 7eiz:B, 7eiz:D, 8gw1:B, 8gwb:B, 8gwk:B, 8gwk:D, 8gwm:B, 8gwn:B, 7krn:D, 7krn:B, 7kro:D, 7kro:B, 7krp:D, 7krp:B, 7rdx:D, 7rdx:B, 7rdy:B, 7rdy:D, 7rdz:B, 7rdz:D, 7re0:B, 7re0:D, 7re1:B, 7re1:D, 7re2:D, 7re3:D, 7re3:H, 7re3:J, 8sq9:D, 8sqj:B, 8sqk:D, 7uo4:B, 7uo4:D, 7uo7:D, 7uo9:D, 7uob:B, 7uob:D, 7uoe:B, 7uoe:D, 6yyt:B, 6yyt:D
3 6v55:A 746 80 0.1231 0.0322 0.3000 1.0
4 3bk7:A 593 99 0.1282 0.0422 0.2525 2.5 3j15:B, 5lw7:B, 1yqt:A, 5yv5:A
5 5hn8:D 334 97 0.1179 0.0689 0.2371 4.4 3cc9:C, 5hn8:A, 5hn8:B, 5hn9:C, 3ph7:C
6 5k6w:A 475 55 0.0769 0.0316 0.2727 5.5 5k6v:A, 5k6w:B
7 7eg3:E 194 60 0.0923 0.0928 0.3000 6.6 7eg2:A, 7eg2:B, 7eg2:C, 7eg2:D, 7eg2:E, 7eg2:F, 7eg2:G, 7eg2:H, 7eg2:I, 7eg2:J, 7eg2:K, 7eg2:L, 7eg2:M, 7eg2:N, 7eg2:O, 7eg2:P, 7eg3:A, 7eg3:B, 7eg3:C, 7eg3:D, 7eg3:F, 7eg3:G, 7eg3:H, 7eg3:I, 7eg3:J, 7eg3:K, 7eg3:L, 7eg3:M, 7eg3:N, 7eg3:O, 7eg3:P, 1ej3:A, 1ej3:B, 1sl8:A, 1uhh:A, 1uhh:B, 1uhi:A, 1uhi:B, 1uhj:A, 1uhj:B, 1uhk:A, 1uhk:B, 5zab:A, 5zab:B, 5zab:C, 5zab:D, 5zab:E, 5zab:F, 5zab:G, 5zab:H, 5zab:I, 5zab:J, 5zab:K, 5zab:L, 5zab:M, 5zab:N, 5zab:O, 5zab:P
8 8e8v:B 406 48 0.0821 0.0394 0.3333 6.7 8e8v:A
9 6rxs:A 218 53 0.0821 0.0734 0.3019 9.4
10 8odw:A 612 56 0.0974 0.0310 0.3393 9.5 8odw:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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