Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
FSHEYWMRHALTLAKRARDERGVPVGAVLVLNNRVIGEGWNRANGLHDPTAHAEIMALRQGGLVMQNYRLYDATLYSTFE
PCVMCAGAMIHSRIGRVVFGVRNAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLCRFFRMPRRVFNAQK

The query sequence (length=155) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8e2q:B 160 155 0.9613 0.9313 0.9613 1.40e-110 8e2p:A, 8e2p:B, 8e2p:C, 8e2p:D, 8e2q:A, 8e2q:C, 8e2q:D, 8e2r:A, 8e2r:B, 8e2s:A, 8e2s:B, 8e2s:C, 8e2s:D, 8e2s:E, 8e2s:F, 8e2s:G, 8e2s:H, 6vpc:F
2 1z3a:A 156 149 0.8645 0.8590 0.8993 1.85e-95 3ocq:A, 1z3a:B
3 2b3j:C 152 141 0.3871 0.3947 0.4255 7.68e-38 2b3j:A, 2b3j:B, 2b3j:D
4 7cph:B 156 146 0.3806 0.3782 0.4041 8.36e-38 7cph:A
5 2nx8:A 168 145 0.3548 0.3274 0.3793 1.76e-33
6 1wwr:C 160 145 0.3613 0.3500 0.3862 8.71e-32 1wwr:A, 1wwr:B, 1wwr:D
7 2a8n:B 138 136 0.3484 0.3913 0.3971 4.70e-27 2a8n:A
8 7nz7:A 166 150 0.3290 0.3072 0.3400 1.04e-22 3dh1:A, 3dh1:B, 3dh1:C, 3dh1:D, 7nz8:A, 7nz9:A
9 1wkq:A 158 110 0.2710 0.2658 0.3818 3.87e-20 1tiy:A, 1tiy:B, 1wkq:B
10 7bv5:A 234 151 0.3484 0.2308 0.3576 2.35e-16 7bv5:B
11 7dc9:D 161 102 0.2323 0.2236 0.3529 2.76e-15 7dbf:A, 7dbf:D, 7dc9:A, 7dca:A, 7dca:D, 7dcb:A, 7dcb:D, 7dcw:A, 7dcw:D, 7dgc:A, 7dgc:D, 7dh1:A, 7dh1:D, 7dlc:A, 7dlc:D, 7dm5:A, 7dm5:D, 7dm6:A, 7dm6:D, 7dow:A, 7dow:D, 7dox:A, 7dox:D, 7doy:A, 7doy:D, 7dpk:A, 7dpk:D, 7dqn:A, 7dqn:D, 5jfy:A, 5jfy:B, 5jfy:C, 5jfy:D, 7w1q:A, 7w1q:D
12 7nz8:B 284 122 0.3032 0.1655 0.3852 4.10e-15 7nz7:B, 7nz9:B
13 8aw3:2 177 159 0.3097 0.2712 0.3019 6.61e-15
14 2hxv:A 349 150 0.3226 0.1433 0.3333 4.86e-13
15 4g3m:A 361 154 0.3226 0.1385 0.3247 3.85e-12 2b3z:A, 2b3z:B, 2b3z:C, 2b3z:D, 2d5n:A, 2d5n:B, 2d5n:C, 2d5n:D, 3ex8:A, 3ex8:B, 3ex8:C, 3ex8:D, 4g3m:B, 4g3m:C, 4g3m:D
16 2o7p:A 358 150 0.3032 0.1313 0.3133 1.30e-11 2o7p:B, 2obc:A
17 3zpc:A 357 152 0.3161 0.1373 0.3224 8.08e-11 3zpc:B, 3zpg:A
18 8i3p:B 166 83 0.2129 0.1988 0.3976 6.75e-09 8i3n:A, 8i3n:B, 8i3n:C, 8i3n:D, 8i3o:A, 8i3o:B, 8i3o:C, 8i3o:D, 8i3p:A, 2o3k:A, 2o3k:B, 1ox7:A, 1ox7:B, 1p6o:A, 1p6o:B, 1rb7:A, 1rb7:B, 1uaq:A, 1uaq:B, 8vlj:A, 8vlj:B, 8vlk:A, 8vlk:B, 8vlk:C, 8vlk:D, 8vll:A, 8vll:B, 8vlm:A, 8vlm:B, 8vlm:C, 8vlm:D, 1ysb:A, 1ysb:B, 1ysd:A, 1ysd:B
19 8wlv:A 158 103 0.2194 0.2152 0.3301 8.62e-08 8wlv:B, 8wlv:C, 8wlv:D, 8wlw:A, 8wlw:C, 8wlw:B, 8wlw:D, 8wlx:A, 8wlx:B, 5xko:A, 5xko:B, 5xkp:A, 5xkp:B, 5xkp:C, 5xkp:D, 5xkq:A, 5xkq:B, 5xkq:C, 5xkq:D, 5xkr:A, 5xkr:B, 5xkr:C, 5xkr:D
20 2hvw:A 147 116 0.2129 0.2245 0.2845 2.72e-07 5c2o:A, 5c2o:B, 2hvv:A, 2hvv:B, 2hvw:B, 2hvw:C
21 7bv5:D 310 116 0.2452 0.1226 0.3276 3.38e-07
22 7bv5:C 284 116 0.2452 0.1338 0.3276 4.09e-07
23 8dqb:A 370 156 0.3032 0.1270 0.3013 4.11e-07 8dq9:A, 8dq9:B, 8dqc:A, 8dqc:B
24 6l2m:A 144 114 0.1613 0.1736 0.2193 1.50e-06 6l2l:A
25 2g84:A 189 166 0.3032 0.2487 0.2831 7.09e-06 7c3s:A, 7c3s:B, 7c3t:A, 7c3t:B, 7c3u:A, 7c3u:B, 2g84:B, 4hrq:A, 4hrq:B, 4hrw:A, 4hrw:B, 4lc5:A, 4lc5:B, 4lcn:A, 4lcn:B, 4lco:A, 4lco:B, 4lcp:A, 4lcp:B, 4ld2:A, 4ld2:B, 4ld4:A, 4ld4:B
26 2w4l:C 142 103 0.2000 0.2183 0.3010 1.53e-05
27 8aw3:3 279 53 0.1161 0.0645 0.3396 6.05e-05
28 2w4l:E 162 116 0.2065 0.1975 0.2759 6.61e-04 2w4l:A, 2w4l:B, 2w4l:D, 2w4l:F
29 4p9c:A 136 129 0.2000 0.2279 0.2403 0.004 4p9c:B, 4p9c:C, 4p9c:D, 4p9c:E, 4p9c:F, 4p9c:G, 4p9c:H, 4p9c:I, 4p9c:J, 4p9c:K, 4p9c:L, 4p9d:A, 4p9d:B, 4p9d:C, 4p9d:D, 4p9d:E, 4p9d:F, 4p9e:A
30 1vq2:A 173 72 0.1355 0.1214 0.2917 0.16
31 2r0y:A 283 53 0.0968 0.0530 0.2830 0.30
32 5w3v:A 186 72 0.1161 0.0968 0.2500 0.30 5w3v:B, 5w3v:C, 5w3v:D
33 5zva:B 185 37 0.0774 0.0649 0.3243 0.66 4j4j:A, 4j4j:B, 5w2m:A, 5w2m:B, 5w2m:C, 5w2m:D, 5w2m:M, 5w2m:J, 5w2m:K, 5w2m:L, 3wus:A, 3wus:B, 5zva:A, 5zvb:A, 5zvb:B
34 5z98:B 182 58 0.0968 0.0824 0.2586 1.3 5z98:A
35 3vm8:A 187 37 0.0774 0.0642 0.3243 1.5 3vm8:B, 3vow:A, 3vow:B
36 4iou:B 179 37 0.0774 0.0670 0.3243 6.1 5hx5:A, 5hx5:B, 4iou:A, 4iou:C, 4iou:D
37 6ain:B 395 25 0.0710 0.0278 0.4400 7.9
38 7xey:B 519 68 0.1226 0.0366 0.2794 8.5
39 5w45:A 181 58 0.0903 0.0773 0.2414 8.6 6b0b:A, 6b0b:E, 6bbo:A, 6bbo:E, 8fvi:A, 5w45:B
40 7ase:l 258 49 0.1032 0.0620 0.3265 9.7 5opt:L

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218