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BioLiP
>protein
FSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKR

The query sequence (length=51) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8pna:A 67 51 1.0000 0.7612 1.0000 7.17e-33 8pm5:A, 8pm5:D, 8pm5:G, 8pm5:M, 8pm5:J, 8pm7:A, 8pm7:C, 8pm7:E, 8pm7:G, 8pmc:A, 8pmc:C, 8pmc:E, 8pmc:G, 8pmf:A, 8pmn:A, 8pmv:A, 8pmv:D, 8pmv:G, 8pmv:J, 8pn4:A, 8pn4:D, 8pn4:G, 8pn4:M, 8pn4:J, 8pnc:A, 8pnc:K, 8pnc:E, 8pnc:H
2 3a01:A 78 51 0.5490 0.3590 0.5490 8.90e-16 3a01:E
3 2me6:A 71 51 0.5294 0.3803 0.5294 7.15e-15
4 1ig7:A 58 51 0.5098 0.4483 0.5098 3.49e-14
5 4rdu:D 62 51 0.4902 0.4032 0.4902 6.85e-14 4rdu:A, 4xrs:I, 4xrs:G
6 3rkq:A 58 50 0.5490 0.4828 0.5600 2.28e-13 3rkq:B
7 5flv:M 229 51 0.5686 0.1266 0.5686 1.22e-12 5flv:A, 5flv:E, 5flv:I, 4s0h:A, 4s0h:B, 4s0h:E, 4s0h:F, 6wc2:N, 6wc2:M, 6wc2:O, 6wc5:I, 6wc5:N, 2x6u:A, 2x6v:A, 2x6v:B
8 1b72:A 68 51 0.5098 0.3824 0.5098 5.15e-12
9 2h1k:B 60 51 0.4706 0.4000 0.4706 9.62e-12 2h1k:A
10 1nk2:P 77 51 0.5098 0.3377 0.5098 1.46e-11 1nk3:P
11 4rbo:A 55 51 0.5490 0.5091 0.5490 1.77e-11 4rbo:D
12 1ahd:P 68 51 0.4314 0.3235 0.4314 2.29e-11
13 6es3:K 72 48 0.4118 0.2917 0.4375 2.40e-11 6es2:K, 6es2:L, 6es3:M, 5lty:K, 5lty:M, 5lux:K, 5lux:L, 7q3o:K, 7q3o:C, 7q3o:E, 7q3o:G, 7q4n:K, 7q4n:C
14 8eml:A 58 51 0.4902 0.4310 0.4902 2.52e-11 8eml:B
15 2r5z:A 75 51 0.4314 0.2933 0.4314 2.78e-11 9ant:A, 9ant:B, 5jlw:A, 5jlw:D, 5jlx:A, 5jlx:D, 2r5y:A, 4xic:A, 4xic:D, 4xid:A, 4xid:D
16 3a01:F 61 51 0.4118 0.3443 0.4118 3.51e-11 3a01:B, 3lnq:A
17 1jgg:A 57 51 0.4706 0.4211 0.4706 4.31e-11 1jgg:B
18 1fjl:A 65 51 0.4314 0.3385 0.4314 8.30e-11 1fjl:B, 1fjl:C
19 2lkx:A 68 51 0.3922 0.2941 0.3922 1.89e-10
20 3cmy:A 60 51 0.4118 0.3500 0.4118 2.31e-10
21 8osb:E 62 51 0.4118 0.3387 0.4118 7.24e-10
22 4uus:A 67 51 0.4118 0.3134 0.4118 1.55e-09 4uus:E
23 4cyc:A 66 51 0.4118 0.3182 0.4118 3.44e-09 1b8i:A
24 1puf:A 77 51 0.4510 0.2987 0.4510 9.65e-09 2lp0:A
25 5eea:G 63 51 0.3725 0.3016 0.3725 2.57e-08 8byx:B, 8byx:J, 8byx:A, 8byx:K, 8byx:G, 8byx:L, 5edn:A, 5edn:B, 5edn:G, 5edn:J, 5eea:B, 5eea:A, 5eea:J, 5ef6:A, 5ef6:J, 5ef6:B, 5ef6:G, 5eg0:B, 5ego:B, 5no6:A, 5no6:B, 7psx:A, 7psx:B, 7psx:G, 7psx:J
26 5zjr:A 64 48 0.4510 0.3594 0.4792 5.79e-08 5zjq:A, 5zjs:A, 5zjt:A, 5zjt:E
27 2ld5:A 67 51 0.3725 0.2836 0.3725 1.22e-07
28 6m3d:C 108 51 0.3725 0.1759 0.3725 1.68e-07 1du0:A, 1du0:B, 1hdd:C, 1hdd:D, 2hdd:A, 2hdd:B, 3hdd:A, 3hdd:B, 2hos:A, 2hos:B, 2hot:A, 2hot:B
29 6m3d:C 108 45 0.3333 0.1574 0.3778 1.00e-06 1du0:A, 1du0:B, 1hdd:C, 1hdd:D, 2hdd:A, 2hdd:B, 3hdd:A, 3hdd:B, 2hos:A, 2hos:B, 2hot:A, 2hot:B
30 1zq3:P 68 50 0.3922 0.2941 0.4000 2.13e-07
31 8ejo:A 56 48 0.2941 0.2679 0.3125 5.17e-06 8ejo:B, 8ejp:A, 8ejp:B
32 4qtr:C 57 51 0.3725 0.3333 0.3725 7.82e-06 4qtr:A, 4qtr:B, 4qtr:D
33 6e8c:A 135 47 0.2941 0.1111 0.3191 3.61e-05 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
34 6e8c:A 135 47 0.2745 0.1037 0.2979 1.07e-04 6a8r:A, 6a8r:B, 6dfy:C, 6dfy:D, 7dw5:A, 7dw5:B, 6u81:A, 6u82:A, 6u82:D, 5z2t:C, 5z2t:D, 5z6z:A, 5zfw:A, 5zfy:A, 5zfz:A
35 9b8u:B 66 44 0.2941 0.2273 0.3409 6.86e-05 9b8u:A, 9b8u:C, 9b8u:D
36 5wc9:A 136 43 0.3725 0.1397 0.4419 1.82e-04 1au7:A, 1au7:B, 5wc9:B, 5wc9:E, 5wc9:F
37 4egc:A 539 46 0.3137 0.0297 0.3478 0.001
38 1le8:A 53 42 0.2549 0.2453 0.3095 0.001 1akh:A, 1yrn:A
39 7xrc:C 134 45 0.3333 0.1269 0.3778 0.023 2xsd:C
40 1lfu:P 82 46 0.2745 0.1707 0.3043 0.037 1b72:B, 1b8i:B, 4cyc:B, 1puf:B, 2r5y:B, 2r5z:B, 4uus:B, 4uus:F, 5zjq:B, 5zjr:B, 5zjs:B, 5zjt:B
41 1gt0:C 137 44 0.3725 0.1387 0.4318 0.038 1cqt:A, 1cqt:B, 1e3o:C, 1hf0:A, 1hf0:B, 1o4x:A, 1oct:C
42 3l1p:A 147 43 0.3137 0.1088 0.3721 0.12 8bx2:A, 6ht5:E, 3l1p:B, 8sps:L, 8spu:L, 6t90:K, 7u0g:M, 7u0g:L, 7u0i:L, 7u0i:M
43 3d1n:I 150 50 0.2745 0.0933 0.2800 0.13 3d1n:K, 3d1n:J, 3d1n:L, 3d1n:M, 3d1n:N, 3d1n:O, 3d1n:P
44 8ik5:C 67 40 0.2941 0.2239 0.3750 0.21 8ike:C, 8ilw:C
45 5hod:A 61 51 0.2941 0.2459 0.2941 0.40 5hod:D
46 8bx1:A 127 42 0.2941 0.1181 0.3571 0.48
47 8g8e:X 140 43 0.2941 0.1071 0.3488 1.2 8g87:X, 8g88:X, 8g8b:X, 8g8g:X, 8sps:M, 7u0g:K
48 8wwu:B 492 17 0.1765 0.0183 0.5294 1.3 8wwu:A, 8wwu:C, 8wwu:D, 8wwu:E, 8wwu:F, 8wwv:A, 8wwv:B, 8wwv:C, 8wwv:D, 8wwv:E, 8wwv:F, 8x6z:A, 8x6z:B, 8x6z:C, 8x6z:D, 8x6z:E, 8x6z:F
49 1akh:B 78 53 0.3137 0.2051 0.3019 2.9 1apl:C, 1apl:D, 1k61:A, 1k61:B, 1k61:C, 1k61:D, 1le8:B, 1yrn:B
50 5yzg:D 1908 36 0.2745 0.0073 0.3889 3.1 6ahd:D, 8bc8:B, 8bc9:B, 8bca:B, 8bcb:B, 8bcc:B, 8bcd:B, 8bce:B, 8bcf:B, 8bcg:B, 8bch:B, 7bdi:B, 7bdj:B, 7bdk:B, 7bdl:B, 4f92:B, 4f93:B, 6ff7:r, 8h6k:5D, 8h6l:5D, 4kit:B, 5o9z:C, 7os1:B, 8qo9:B, 8qzs:B, 5urj:A, 5urk:A, 5urm:A, 5urm:B, 5xjc:D
51 1mnm:C 77 53 0.3137 0.2078 0.3019 3.2 1mnm:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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