BioLiP

>protein
FPVVLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAFLSINGDKPINLAHSNYEDALKAIAFELEKRDLTDSVALI
GHRIAHGGELFTQSVIITDEIIDNIRRVSPLAPLHNYANLSGIDAARHLFPAVRQVAVFDTSFHQTLAPEAYLYGLPWEY
FSSLGVRRYGFHGTSHRYVSRRAYELLDLDEKDSGLIVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFG
AMAWIAKETGQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGIIF
TGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICAVIPTNEEKMIALDAIHLGNVKA

The query sequence (length=394) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2e1z:A	394	394	1.0000	1.0000	1.0000	0.0	2e20:A, 4fwk:A, 4fwm:A, 4fwn:A, 4fwo:A, 4fwp:A, 4fwq:A, 4fwr:A, 4fws:A, 1x3m:A, 1x3n:A, 4xh1:A, 4xh4:A, 4xh5:A
2	7fj8:A	395	392	0.4416	0.4405	0.4439	1.20e-108	7fj9:A, 7fj9:B, 7fja:A, 7fja:B, 7fjb:A, 7fjb:B
3	1tuu:A	399	390	0.4010	0.3960	0.4051	5.47e-99	1g99:A, 1g99:B, 1tuu:B, 1tuy:A, 1tuy:B
4	4ijn:A	376	380	0.4010	0.4202	0.4158	3.19e-91	4ijn:B
5	4iz9:A	381	390	0.3909	0.4042	0.3949	7.77e-86
6	1saz:A	375	225	0.1294	0.1360	0.2267	2.09e-09
7	5fjq:A	180	94	0.0685	0.1500	0.2872	1.0	5fjq:B, 5fjq:C
8	8jzk:A	214	66	0.0558	0.1028	0.3333	2.7
9	7ytp:A	731	53	0.0431	0.0233	0.3208	2.8	7ytp:B
10	5y3r:C	3636	129	0.0761	0.0083	0.2326	3.0
11	6qex:A	1182	156	0.0939	0.0313	0.2372	5.4	7a65:A, 7a69:A, 7a6c:A, 7a6e:A, 7a6f:A, 6c0v:A, 7o9w:A
12	6ciz:C	477	52	0.0406	0.0335	0.3077	6.2	6chi:A, 6chi:B, 6chi:C, 6chi:D, 6cir:A, 6cir:B, 6cir:C, 6cir:D, 6ciz:A, 6ciz:B, 6ciz:D, 8fda:A, 8fda:B, 8fda:C, 8fda:D, 5irq:A, 5irq:B, 5irq:C, 5irq:D, 5irv:A, 5irv:B, 5irv:C, 5irv:D, 4nkv:A, 4nkv:B, 4nkv:C, 4nkv:D, 4nkw:A, 4nkw:B, 4nkw:C, 4nkw:D, 4nkx:A, 4nkx:B, 4nkx:C, 4nkx:D, 4nky:A, 4nky:B, 4nky:C, 4nky:D, 4nkz:A, 4nkz:B, 4nkz:C, 4nkz:D, 3ruk:A, 3ruk:B, 3ruk:C, 3ruk:D, 3swz:A, 3swz:B, 3swz:C, 3swz:D, 5uys:A, 5uys:B, 5uys:C, 5uys:D, 6wr0:A, 6wr0:B, 6wr0:C, 6wr0:D, 6wr1:A, 6wr1:B, 6ww0:A, 6ww0:B, 6ww0:C, 6ww0:D
13	7lg5:A	871	30	0.0330	0.0149	0.4333	6.2	7lg5:B, 7lg5:C, 7lg5:D, 7lgj:A, 7lgj:B, 7lgj:C, 7lgj:D, 7lgq:A, 7lgq:B, 7lgq:C, 7lgq:D, 7txu:A, 7txu:B, 7txu:C, 7txu:D, 7txv:A, 7txv:B, 7txv:C, 7txv:D
14	3uer:A	651	42	0.0406	0.0246	0.3810	8.1
15	2jks:A	284	125	0.0685	0.0951	0.2160	9.4
16	4pht:B	442	23	0.0254	0.0226	0.4348	9.6	1p9r:A, 1p9w:A, 4pht:A, 4pht:C

[Back]