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BioLiP
>protein
FLDKSEVTDRVLSVVKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVDFIASHP
QAK

The query sequence (length=83) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8bee:U 87 83 1.0000 0.9540 1.0000 4.15e-55 7aqr:U, 7arb:U, 8bpx:U, 8bq5:U, 8bq6:U
2 8e73:AB 85 82 0.8554 0.8353 0.8659 2.05e-47
3 7ar7:T 84 81 0.6386 0.6310 0.6543 1.25e-34 7ar8:T, 8bq6:T
4 6sga:Fc 84 83 0.6145 0.6071 0.6145 5.15e-30 6sgb:Fc, 6yxy:EK
5 7zmb:Q 85 82 0.5542 0.5412 0.5610 3.19e-26 7zm7:O, 7zmb:O, 7zme:Q, 7zmg:O, 7zmg:Q
6 7b0n:U 88 82 0.4819 0.4545 0.4878 1.73e-24 6rfq:Q, 6rfr:Q, 6y79:Q
7 7ak6:U 88 71 0.4578 0.4318 0.5352 2.28e-22 7a5h:w, 7ak6:T, 8c2s:T, 8c2s:U, 8ca3:T, 8ca5:T, 8ca5:U, 6g2j:U, 6g72:U, 5gup:O, 5gup:X, 5lnk:j, 5lnk:X, 6odd:A, 7oi6:w, 7oi8:w, 7oie:w, 8olt:T, 8om1:U, 5ool:w, 5oom:w, 8pw7:T1, 8q0a:T, 8q0a:U, 8q0f:U, 8q0o:U, 8q1p:T, 8q1u:T, 8q1y:U, 8q25:T, 8q45:T, 8q46:T, 8q46:U, 8q47:T, 8q47:U, 8q49:U, 6q9b:AB, 6q9d:AA, 6qa9:AA, 6qa9:AB, 6qbx:AA, 6qbx:AB, 6qc5:AA, 6qc6:AA, 6qc7:AA, 6qc8:AB, 7qsd:T, 7qsl:T, 7qsn:T, 8qu5:w, 7r41:T, 7r43:T, 7r44:T, 7r45:T, 7r46:T, 7r47:T, 7r47:U, 7r48:T, 7r4c:T, 7r4d:T, 7r4f:U, 7r4g:T, 8rgt:T, 8ud1:1U, 8ueo:1T, 8ueo:1U, 8uep:1U, 8ueq:1T, 8ueq:1U, 8uer:1T, 8uer:1U, 8ues:1T, 8ues:1U, 8uet:1T, 8ueu:1T, 8ueu:1U, 8uev:1T, 8uew:1T, 8uew:1U, 8uex:1T, 8uex:1U, 8uey:1T, 8uey:1U, 8uez:1T, 8uez:1U, 8ugh:1U, 8ugi:1U, 8ugj:1U, 8ugn:1T, 8ugn:1U, 8ugn:5U, 8ugr:1U, 8ugr:5T, 8ugr:5U, 7v2d:X, 7v2f:X, 7v2k:X, 7v30:X, 7v32:X, 7v33:G, 7v3m:X, 7vbl:X, 7vbp:X, 7vwj:G, 7vwl:X, 7vy1:X, 7vye:X, 7vyi:X, 7vzv:X, 7w00:X, 7w0h:X, 7w1o:X, 7w1p:X, 7w20:X, 7w2k:X, 7w2l:X, 7w31:G, 7w32:X, 7w35:X, 7w4c:X, 7w4g:X, 7w4j:X, 7w4k:X, 7w4l:X, 7w4n:X, 7zdh:X, 7zdm:j, 7zdm:X, 7zdp:X, 7zdp:j, 6zka:X, 6zkb:X, 6zkc:X, 6zkd:j, 6zke:X, 6zkf:X, 6zkg:X, 6zkh:X, 6zkh:j, 6zki:X, 6zkj:X, 6zkk:X, 6zkl:X, 6zkm:X, 6zkm:j, 6zkn:X, 6zkn:j, 6zko:X, 6zkp:X, 6zkp:j, 6zkr:X, 6zks:X, 6zkt:X, 6zku:X, 6zr2:T, 6zr2:U, 6ztq:U
8 8ba0:U 85 60 0.4337 0.4235 0.6000 1.52e-21 8ba0:T, 8esz:AC
9 8iuf:AB 88 82 0.4699 0.4432 0.4756 3.11e-21 8j9h:AB, 8j9i:AB, 8j9j:AB
10 8iuf:AC 92 83 0.5181 0.4674 0.5181 6.25e-21 8j9h:AC, 8j9i:AC, 8j9j:AC
11 2fac:A 77 75 0.4458 0.4805 0.4933 5.84e-19 2fac:B, 2fad:A, 2fad:B, 2fae:A, 4keh:C, 4keh:D, 1l0i:A, 6n3p:I, 6n3p:L, 6n3p:J, 3ny7:B, 7nyw:G, 7nyx:G, 7nyy:G, 7nyz:G, 7nz0:G, 7nz2:G1, 7nz2:G2, 7nz2:G3, 7nz2:G4, 7nz3:G1, 7nz3:G2, 7nz4:G1, 7nz4:G2, 1t8k:A, 5usr:K, 5vcb:f, 5vcb:e, 5vcb:d, 5vcb:F, 5vcb:D, 5vcb:X, 6w1d:C, 6w98:B
12 7arc:U 84 82 0.4578 0.4524 0.4634 1.87e-18 7ard:U
13 2eht:A 77 68 0.3855 0.4156 0.4706 1.16e-17
14 7b0n:T 81 75 0.4940 0.5062 0.5467 3.21e-17 6gcs:O, 7o6y:O, 6rfq:O, 6rfr:O, 6rfs:O, 6y79:O
15 8jfh:E 79 64 0.3976 0.4177 0.5156 3.34e-16 8jfn:B
16 2qnw:A 80 74 0.4217 0.4375 0.4730 4.81e-16
17 2x2b:A 76 75 0.3735 0.4079 0.4133 1.99e-13
18 3gzl:A 81 61 0.3253 0.3333 0.4426 8.94e-12 2fq0:A, 2fq2:A, 3gzm:B
19 6lvu:A 78 73 0.3373 0.3590 0.3836 2.23e-10 6lvu:B
20 2fva:A 82 73 0.3494 0.3537 0.3973 9.48e-09
21 2koo:A 81 49 0.2410 0.2469 0.4082 2.57e-06 2kop:A, 2koq:A, 2kor:A, 2kos:A
22 2ll8:A 101 51 0.1928 0.1584 0.3137 3.69e-06
23 6kfu:A 527 82 0.2651 0.0417 0.2683 0.005 6kfm:A, 6kfm:B, 6kfr:A, 6kfr:B
24 4h2y:D 63 29 0.1446 0.1905 0.4138 0.043
25 2k0x:A 86 34 0.1566 0.1512 0.3824 0.045 2kg6:A, 2kg8:A, 2kg9:A, 2kga:A, 2kgc:A, 2kgd:A, 2kge:A, 2mvu:A, 2mvv:A
26 5kp8:B 78 76 0.2169 0.2308 0.2368 0.048
27 4h2w:D 75 25 0.1446 0.1600 0.4800 0.061 4h2x:D
28 5hv8:A 95 37 0.1566 0.1368 0.3514 0.062
29 4neh:A 1084 57 0.2169 0.0166 0.3158 0.48 5es4:A, 3k6s:A, 3k71:G
30 4nen:A 1063 57 0.2169 0.0169 0.3158 0.51
31 3k6s:C 885 57 0.2169 0.0203 0.3158 0.63 5es4:C, 5es4:E, 5es4:G, 3k6s:E, 3k6s:G, 3k71:A, 3k71:C, 3k71:E, 3k72:A, 3k72:C
32 2lki:A 83 47 0.2169 0.2169 0.3830 0.67
33 2kr5:A 89 54 0.1928 0.1798 0.2963 1.1
34 7auf:A 89 78 0.2771 0.2584 0.2949 1.3
35 7ebp:A 526 21 0.1205 0.0190 0.4762 1.6 7ebp:B, 7ebq:A
36 4bph:A 85 55 0.2048 0.2000 0.3091 1.7
37 8qzi:E 86 55 0.1807 0.1744 0.2727 2.3 7bdw:B, 6rcx:B
38 8ahq:C 78 37 0.1566 0.1667 0.3514 2.7 8ahq:D
39 5msr:B 520 35 0.1807 0.0288 0.4286 3.9 5msp:A, 5msr:A, 5msr:C, 5msr:D, 5msv:A, 5msv:B, 5msv:C, 5msv:D
40 5mss:A 717 34 0.1807 0.0209 0.4412 4.0 5mst:A, 5mst:B, 5msw:A
41 5g5s:A 692 53 0.1687 0.0202 0.2642 4.2 5g5t:A
42 5a4f:L 581 33 0.1566 0.0224 0.3939 4.5 5a4f:M, 5a4i:L, 5a4i:M, 5a4m:L, 5a4m:M, 5adu:L, 5adu:M, 6fpi:L, 6fpi:M, 6fpo:L, 6fpo:M, 6fpw:L, 6fpw:M, 6g7r:L, 6g7r:M, 6g94:L, 6g94:M, 6g94:J, 6g94:K, 6gal:L, 6gal:M, 4gd3:L, 4gd3:M, 4gd3:J, 4gd3:K, 5jrd:L, 5jrd:M, 5lmm:L, 5lmm:M, 5lry:L, 5lry:M, 6rp2:L, 6rp2:M, 4ue3:LLL, 4ue3:MMM, 3uqy:L, 3uqy:M, 3usc:L, 3usc:M, 3use:L, 3use:M
43 4r2l:A 142 41 0.1928 0.1127 0.3902 5.3 4r2l:B, 4r2m:A, 4r2m:B
44 3c8e:A 284 54 0.1446 0.0423 0.2222 5.7 3c8e:B
45 7f2r:B 79 32 0.1446 0.1519 0.3750 9.2

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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